RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 RBMY1BA6NDE4 496 aaKnown RBP17.17■□□□□ 0.34
CCND3-202ENST00000372988 RBMY1EA6NEQ0 496 aaKnown RBP17.17■□□□□ 0.34
CCND3-202ENST00000372988 RBMY1DP0C7P1 496 aaKnown RBP17.17■□□□□ 0.34
CCND3-202ENST00000372988 FAM218AQ96MZ4 157 aa17.17■□□□□ 0.34
CCND3-202ENST00000372988 PIMREGQ9BSJ6 248 aa17.17■□□□□ 0.34
CCND3-202ENST00000372988 SMIM1B2RUZ4 78 aa17.17■□□□□ 0.34
CCND3-202ENST00000372988 LINC00694P0DN24 101 aa17.15■□□□□ 0.34
CCND3-202ENST00000372988 DGAT2L7PQ6IED9 249 aa17.15■□□□□ 0.34
CCND3-202ENST00000372988 AKAP6Q13023 2319 aa17.15■□□□□ 0.34
CCND3-202ENST00000372988 C11orf72Q8NBR9 251 aa17.14■□□□□ 0.33
CCND3-202ENST00000372988 C10orf105Q8TEF2 133 aa17.13■□□□□ 0.33
CCND3-202ENST00000372988 INAFM2P0DMQ5 153 aa17.12■□□□□ 0.33
CCND3-202ENST00000372988 RS1O15537 224 aa17.12■□□□□ 0.33
CCND3-202ENST00000372988 NBL1P41271 181 aa17.12■□□□□ 0.33
CCND3-202ENST00000372988 DEFB131AP59861 70 aa17.12■□□□□ 0.33
CCND3-202ENST00000372988 PRIMA1Q86XR5 153 aa17.11■□□□□ 0.33
CCND3-202ENST00000372988 SORL1Q92673 2214 aa17.11■□□□□ 0.33
CCND3-202ENST00000372988 C19orf84I3L1E1 186 aa17.11■□□□□ 0.33
CCND3-202ENST00000372988 HOXD3P31249 432 aaPredicted RBP17.11■□□□□ 0.33
CCND3-202ENST00000372988 HIST1H4AP62805 103 aaKnown RBP17.11■□□□□ 0.33
CCND3-202ENST00000372988 NRGNQ92686 78 aa17.11■□□□□ 0.33
CCND3-202ENST00000372988 C2orf48Q96LS8 159 aa17.11■□□□□ 0.33
CCND3-202ENST00000372988 COX7CP15954 63 aa17.1■□□□□ 0.33
CCND3-202ENST00000372988 AVPP01185 164 aa17.09■□□□□ 0.33
CCND3-202ENST00000372988 F5H768 121 aa17.09■□□□□ 0.33
CCND3-202ENST00000372988 MSMBP08118 114 aa17.08■□□□□ 0.33
CCND3-202ENST00000372988 MALP21145 153 aa17.08■□□□□ 0.33
CCND3-202ENST00000372988 HIST2H2BCQ6DN03 193 aa17.08■□□□□ 0.33
CCND3-202ENST00000372988 HIST2H2BDQ6DRA6 164 aa17.08■□□□□ 0.33
CCND3-202ENST00000372988 GAGE2AQ6NT46 116 aa17.08■□□□□ 0.33
CCND3-202ENST00000372988 RPL28P46779 137 aaKnown RBP17.08■□□□□ 0.32
CCND3-202ENST00000372988 IGHV4-59P01825 116 aa17.07■□□□□ 0.32
CCND3-202ENST00000372988 CSDC2Q9Y534 153 aaKnown RBP17.06■□□□□ 0.32
CCND3-202ENST00000372988 ATRXP46100 2492 aa17.06■□□□□ 0.32
CCND3-202ENST00000372988 Q9HAA7 133 aa17.06■□□□□ 0.32
CCND3-202ENST00000372988 PF4P02776 101 aa17.05■□□□□ 0.32
CCND3-202ENST00000372988 KLK5Q9Y337 293 aaPredicted RBP17.05■□□□□ 0.32
CCND3-202ENST00000372988 CRYGAP11844 174 aa17.05■□□□□ 0.32
CCND3-202ENST00000372988 IGHV4-30-2A0A087WSY4 118 aa17.04■□□□□ 0.32
CCND3-202ENST00000372988 TRAV13-1A0A0B4J241 112 aa17.04■□□□□ 0.32
CCND3-202ENST00000372988 COL12A1Q99715 3063 aa17.04■□□□□ 0.32
CCND3-202ENST00000372988 HIVEP3Q5T1R4 2406 aa17.04■□□□□ 0.32
CCND3-202ENST00000372988 TRAV13-2A0A0B4J235 113 aa17.03■□□□□ 0.32
CCND3-202ENST00000372988 UCNP55089 124 aa17.03■□□□□ 0.32
CCND3-202ENST00000372988 A0A1B0GX51 115 aa17.03■□□□□ 0.32
CCND3-202ENST00000372988 LRRC75A-AS1Q8N1F1 130 aa17.03■□□□□ 0.32
CCND3-202ENST00000372988 ATOX1O00244 68 aa17.02■□□□□ 0.31
CCND3-202ENST00000372988 DEFB112Q30KQ8 113 aa17.02■□□□□ 0.31
CCND3-202ENST00000372988 LOC107984640A0A0U1RRK4 108 aa17.01■□□□□ 0.31
CCND3-202ENST00000372988 UBE2E2Q96LR5 201 aa17■□□□□ 0.31
CCND3-202ENST00000372988 Q96MF0 132 aa17■□□□□ 0.31
CCND3-202ENST00000372988 NTM-AS1Q6ZSK4 140 aa17■□□□□ 0.31
CCND3-202ENST00000372988 LINC00337Q8N6G1 96 aa17■□□□□ 0.31
CCND3-202ENST00000372988 CDC42SE2Q9NRR3 84 aa17■□□□□ 0.31
CCND3-202ENST00000372988 CRPP02741 224 aa16.99■□□□□ 0.31
CCND3-202ENST00000372988 OVOL2Q9BRP0 275 aa16.99■□□□□ 0.31
CCND3-202ENST00000372988 IGKV2-28A0A075B6P5 120 aa16.98■□□□□ 0.31
CCND3-202ENST00000372988 J3KT08 172 aa16.98■□□□□ 0.31
CCND3-202ENST00000372988 IGKV2D-28P01615 120 aa16.98■□□□□ 0.31
CCND3-202ENST00000372988 OBSCN-AS1Q96MR7 158 aa16.97■□□□□ 0.31
CCND3-202ENST00000372988 CCL19Q99731 98 aa16.97■□□□□ 0.31
CCND3-202ENST00000372988 INSP01308 110 aa16.97■□□□□ 0.31
CCND3-202ENST00000372988 C9orf129Q5T035 196 aaKnown RBP16.97■□□□□ 0.31
CCND3-202ENST00000372988 SLURP1P55000 103 aa16.96■□□□□ 0.31
CCND3-202ENST00000372988 MAP6D1Q9H9H5 199 aa16.96■□□□□ 0.31
CCND3-202ENST00000372988 CRYBG3Q68DQ2 2970 aa16.96■□□□□ 0.31
CCND3-202ENST00000372988 A0A087WYN8 130 aa16.96■□□□□ 0.3
CCND3-202ENST00000372988 DNAL4O96015 105 aa16.94■□□□□ 0.3
CCND3-202ENST00000372988 RPL18AQ02543 176 aaKnown RBP16.94■□□□□ 0.3
CCND3-202ENST00000372988 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.94■□□□□ 0.32e-19■■■■■ 72.1
CCND3-202ENST00000372988 B4DSR2 109 aa16.94■□□□□ 0.3
CCND3-202ENST00000372988 Q6JHZ5 121 aa16.94■□□□□ 0.3
CCND3-202ENST00000372988 ATP5J2P56134 94 aa16.93■□□□□ 0.3
CCND3-202ENST00000372988 RPL36AP83881 106 aaKnown RBP16.93■□□□□ 0.3
CCND3-202ENST00000372988 MIR7-3HGQ8N6C7 128 aa16.93■□□□□ 0.3
CCND3-202ENST00000372988 IL17DQ8TAD2 202 aa16.93■□□□□ 0.3
CCND3-202ENST00000372988 SMIM11BQ8TCY0 68 aa16.93■□□□□ 0.3
CCND3-202ENST00000372988 RPL36ALQ969Q0 106 aaKnown RBP16.93■□□□□ 0.3
CCND3-202ENST00000372988 hADV29S1A0JD25 119 aa16.93■□□□□ 0.3
CCND3-202ENST00000372988 RPS28P62857 69 aaKnown RBP16.93■□□□□ 0.3
CCND3-202ENST00000372988 SND1-IT1Q9HBX3 110 aa16.93■□□□□ 0.3
CCND3-202ENST00000372988 C14orf132Q9NPU4 83 aa16.93■□□□□ 0.3
CCND3-202ENST00000372988 TRBV10-1A0A0K0K1A3 114 aa16.92■□□□□ 0.3
CCND3-202ENST00000372988 K7EQD1 137 aa16.91■□□□□ 0.3
CCND3-202ENST00000372988 C18orf65Q6ZTR6 163 aa16.91■□□□□ 0.3
CCND3-202ENST00000372988 CYSTM1Q9H1C7 97 aa16.91■□□□□ 0.3
CCND3-202ENST00000372988 IGF2RP11717 2491 aa16.91■□□□□ 0.3
CCND3-202ENST00000372988 MUC6Q6W4X9 2439 aa16.91■□□□□ 0.3
CCND3-202ENST00000372988 DEFB136Q30KP8 78 aa16.91■□□□□ 0.3
CCND3-202ENST00000372988 ZNF702PQ9H963 129 aa16.91■□□□□ 0.3
CCND3-202ENST00000372988 COX7B2Q8TF08 81 aa16.9■□□□□ 0.3
CCND3-202ENST00000372988 H0YGX0 51 aa16.9■□□□□ 0.3
CCND3-202ENST00000372988 FAM19A5Q7Z5A7 132 aaPredicted RBP16.9■□□□□ 0.3
CCND3-202ENST00000372988 LINC00846Q9NV44 126 aa16.9■□□□□ 0.3
CCND3-202ENST00000372988 TRGV1A0A0A0MS02 117 aa16.88■□□□□ 0.29
CCND3-202ENST00000372988 IGKV3D-7A0A0C4DH55 119 aa16.88■□□□□ 0.29
CCND3-202ENST00000372988 UPK3BQ9BT76 320 aa16.86■□□□□ 0.29
CCND3-202ENST00000372988 CCL18P55774 89 aa16.85■□□□□ 0.29
CCND3-202ENST00000372988 SERP2Q8N6R1 65 aa16.85■□□□□ 0.29
CCND3-202ENST00000372988 XCL2Q9UBD3 114 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms