RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 IBA57-AS1B1ANH7 110 aa10.56□□□□□ -0.72
RAPGEF1-202ENST00000372190 H7C423 109 aa10.56□□□□□ -0.72
RAPGEF1-202ENST00000372190 CADP27708 2225 aa10.56□□□□□ -0.72
RAPGEF1-202ENST00000372190 SPINT4Q6UDR6 99 aa10.56□□□□□ -0.72
RAPGEF1-202ENST00000372190 MED13Q9UHV7 2174 aa10.56□□□□□ -0.72
RAPGEF1-202ENST00000372190 OTOGLQ3ZCN5 2332 aa10.56□□□□□ -0.72
RAPGEF1-202ENST00000372190 ODF3BA8MYP8 253 aa10.56□□□□□ -0.72
RAPGEF1-202ENST00000372190 IGKV1-17P01599 117 aa10.55□□□□□ -0.72
RAPGEF1-202ENST00000372190 IGLV2-14P01704 120 aa10.55□□□□□ -0.72
RAPGEF1-202ENST00000372190 Q6ZVQ6 151 aa10.55□□□□□ -0.72
RAPGEF1-202ENST00000372190 Q8N6K4 173 aa10.55□□□□□ -0.72
RAPGEF1-202ENST00000372190 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
RAPGEF1-202ENST00000372190 C11orf1Q9H5F2 150 aa10.55□□□□□ -0.72
RAPGEF1-202ENST00000372190 C8orf87E5RJ46 101 aa10.54□□□□□ -0.72
RAPGEF1-202ENST00000372190 A0A096LNI7 61 aa10.54□□□□□ -0.72
RAPGEF1-202ENST00000372190 FAM19A1Q7Z5A9 133 aa10.54□□□□□ -0.72
RAPGEF1-202ENST00000372190 MAPKAPK5-AS1Q8N8E1 139 aa10.54□□□□□ -0.72
RAPGEF1-202ENST00000372190 A0A1B0GXF2 115 aa10.54□□□□□ -0.72
RAPGEF1-202ENST00000372190 DEFB4AO15263 64 aa10.54□□□□□ -0.72
RAPGEF1-202ENST00000372190 ODF3L1Q8IXM7 274 aa10.54□□□□□ -0.72
RAPGEF1-202ENST00000372190 FRMD6-AS1P0C7T7 363 aa10.54□□□□□ -0.72
RAPGEF1-202ENST00000372190 RPS28P62857 69 aaKnown RBP10.53□□□□□ -0.72
RAPGEF1-202ENST00000372190 C6orf99Q4VX62 202 aa10.53□□□□□ -0.72
RAPGEF1-202ENST00000372190 UBE2D3P61077 147 aa10.53□□□□□ -0.72
RAPGEF1-202ENST00000372190 HHLA3Q9XRX5 114 aa10.53□□□□□ -0.72
RAPGEF1-202ENST00000372190 CREBBPQ92793 2442 aa10.53□□□□□ -0.72
RAPGEF1-202ENST00000372190 C4orf26Q17RF5 130 aa10.53□□□□□ -0.72
RAPGEF1-202ENST00000372190 POM121L12Q8N7R1 296 aa10.53□□□□□ -0.72
RAPGEF1-202ENST00000372190 PCDH15Q96QU1 1955 aa10.52□□□□□ -0.73
RAPGEF1-202ENST00000372190 CRYGAP11844 174 aa10.52□□□□□ -0.73
RAPGEF1-202ENST00000372190 C19orf71A6NCJ1 209 aa10.52□□□□□ -0.73
RAPGEF1-202ENST00000372190 IGF1P05019 195 aa10.52□□□□□ -0.73
RAPGEF1-202ENST00000372190 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.52□□□□□ -0.731e-6■■■□□ 19.2
RAPGEF1-202ENST00000372190 CUL9Q8IWT3 2517 aa10.51□□□□□ -0.73
RAPGEF1-202ENST00000372190 FSTL3O95633 263 aa10.51□□□□□ -0.73
RAPGEF1-202ENST00000372190 ZNF22P17026 224 aaPredicted RBP10.51□□□□□ -0.73
RAPGEF1-202ENST00000372190 Q6ZSV7 163 aa10.51□□□□□ -0.73
RAPGEF1-202ENST00000372190 NUP210LQ5VU65 1888 aa10.51□□□□□ -0.73
RAPGEF1-202ENST00000372190 ZFAND2AQ8N6M9 145 aa10.51□□□□□ -0.73
RAPGEF1-202ENST00000372190 DOPEY2Q9Y3R5 2298 aa10.51□□□□□ -0.73
RAPGEF1-202ENST00000372190 A0A087WVE0 104 aa10.51□□□□□ -0.73
RAPGEF1-202ENST00000372190 PRAC2D3DTV9 90 aa10.51□□□□□ -0.73
RAPGEF1-202ENST00000372190 C2orf91Q6ZV80 131 aa10.5□□□□□ -0.73
RAPGEF1-202ENST00000372190 KLK12Q9UKR0 248 aa10.5□□□□□ -0.73
RAPGEF1-202ENST00000372190 DYSFO75923 2080 aa10.5□□□□□ -0.73
RAPGEF1-202ENST00000372190 PYGO1Q9Y3Y4 419 aa10.5□□□□□ -0.73
RAPGEF1-202ENST00000372190 IGKV1D-37A0A075B6S9 117 aa10.5□□□□□ -0.73
RAPGEF1-202ENST00000372190 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
RAPGEF1-202ENST00000372190 TRBV6-5A0A0K0K1A5 114 aa10.49□□□□□ -0.73
RAPGEF1-202ENST00000372190 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
RAPGEF1-202ENST00000372190 TRBV10-3A0A0K0K1G6 114 aa10.49□□□□□ -0.73
RAPGEF1-202ENST00000372190 C11orf45Q8TAV5 145 aa10.49□□□□□ -0.73
RAPGEF1-202ENST00000372190 CEMP1Q6PRD7 247 aaPredicted RBP10.48□□□□□ -0.73
RAPGEF1-202ENST00000372190 CDSNQ15517 529 aa10.48□□□□□ -0.73
RAPGEF1-202ENST00000372190 C10orf142B7Z368 130 aa10.48□□□□□ -0.73
RAPGEF1-202ENST00000372190 HIVEP2P31629 2446 aa10.47□□□□□ -0.73
RAPGEF1-202ENST00000372190 hDV103S1A0JD37 113 aa10.47□□□□□ -0.73
RAPGEF1-202ENST00000372190 UNQ9165/PRO28630Q6UXU0 137 aa10.47□□□□□ -0.73
RAPGEF1-202ENST00000372190 MAP6D1Q9H9H5 199 aa10.47□□□□□ -0.73
RAPGEF1-202ENST00000372190 LINC01548A6NM66 108 aa10.46□□□□□ -0.73
RAPGEF1-202ENST00000372190 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.73
RAPGEF1-202ENST00000372190 C14orf177Q52M58 125 aa10.46□□□□□ -0.73
RAPGEF1-202ENST00000372190 HILS1P60008 231 aa10.46□□□□□ -0.73
RAPGEF1-202ENST00000372190 CD164Q04900 197 aa10.46□□□□□ -0.73
RAPGEF1-202ENST00000372190 MBD6Q96DN6 1003 aa10.46□□□□□ -0.74
RAPGEF1-202ENST00000372190 SMR3AQ99954 134 aa10.46□□□□□ -0.74
RAPGEF1-202ENST00000372190 ZNF73O43830 326 aaPredicted RBP10.45□□□□□ -0.74
RAPGEF1-202ENST00000372190 KRTAP10-9P60411 292 aa10.45□□□□□ -0.74
RAPGEF1-202ENST00000372190 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.45□□□□□ -0.74
RAPGEF1-202ENST00000372190 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.45□□□□□ -0.74
RAPGEF1-202ENST00000372190 Q8N3U1 123 aa10.45□□□□□ -0.74
RAPGEF1-202ENST00000372190 XAGE1AQ9HD64 81 aa10.45□□□□□ -0.74
RAPGEF1-202ENST00000372190 E7EUB6 86 aa10.45□□□□□ -0.74
RAPGEF1-202ENST00000372190 NTM-AS1Q6ZSK4 140 aa10.45□□□□□ -0.74
RAPGEF1-202ENST00000372190 SPINK6Q6UWN8 80 aa10.44□□□□□ -0.74
RAPGEF1-202ENST00000372190 COL5A1P20908 1838 aaPredicted RBP10.44□□□□□ -0.74
RAPGEF1-202ENST00000372190 IGLV2-8P01709 118 aa10.43□□□□□ -0.74
RAPGEF1-202ENST00000372190 SMIM11BQ8TCY0 68 aa10.43□□□□□ -0.74
RAPGEF1-202ENST00000372190 EML6Q6ZMW3 1958 aa10.43□□□□□ -0.74
RAPGEF1-202ENST00000372190 P0C879 139 aa10.43□□□□□ -0.74
RAPGEF1-202ENST00000372190 F8WDY8 70 aa10.43□□□□□ -0.74
RAPGEF1-202ENST00000372190 IGLV4-3A0A075B6K6 122 aa10.42□□□□□ -0.74
RAPGEF1-202ENST00000372190 CCDC140Q96MF4 163 aa10.42□□□□□ -0.74
RAPGEF1-202ENST00000372190 MDFIQ99750 246 aa10.42□□□□□ -0.74
RAPGEF1-202ENST00000372190 LINC00574Q9H8X3 128 aa10.42□□□□□ -0.74
RAPGEF1-202ENST00000372190 IGKV2-24A0A0C4DH68 120 aa10.42□□□□□ -0.74
RAPGEF1-202ENST00000372190 RETNLBQ9BQ08 111 aa10.42□□□□□ -0.74
RAPGEF1-202ENST00000372190 PCOTHQ58A44 107 aa10.42□□□□□ -0.74
RAPGEF1-202ENST00000372190 GDF5OSQ5U4N7 250 aa10.42□□□□□ -0.74
RAPGEF1-202ENST00000372190 DSCAMO60469 2012 aa10.42□□□□□ -0.74
RAPGEF1-202ENST00000372190 H0Y9P7 68 aa10.42□□□□□ -0.74
RAPGEF1-202ENST00000372190 LINC01006Q8NI28 216 aa10.41□□□□□ -0.74
RAPGEF1-202ENST00000372190 ZNF706Q9Y5V0 76 aaPredicted RBP10.41□□□□□ -0.74
RAPGEF1-202ENST00000372190 REG3AQ06141 175 aa10.41□□□□□ -0.74
RAPGEF1-202ENST00000372190 DCANP1Q8TF63 244 aa10.41□□□□□ -0.74
RAPGEF1-202ENST00000372190 PRM2P04554 102 aa10.41□□□□□ -0.74
RAPGEF1-202ENST00000372190 A0A1B0GU69 56 aa10.41□□□□□ -0.74
RAPGEF1-202ENST00000372190 ZNF702PQ9H963 129 aa10.41□□□□□ -0.74
RAPGEF1-202ENST00000372190 A0A087WZ39 114 aa10.4□□□□□ -0.74
RAPGEF1-202ENST00000372190 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms