RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 LINC00694P0DN24 101 aa8.29□□□□□ -1.08
RAB39B-201ENST00000369454 CDKN2A-AS1Q9UH64 79 aa8.29□□□□□ -1.08
RAB39B-201ENST00000369454 NDUFA12Q9UI09 145 aa8.29□□□□□ -1.08
RAB39B-201ENST00000369454 A8MTW9 85 aa8.28□□□□□ -1.08
RAB39B-201ENST00000369454 GAGE7O76087 117 aa8.28□□□□□ -1.08
RAB39B-201ENST00000369454 GAGE12FP0CL80 117 aa8.28□□□□□ -1.08
RAB39B-201ENST00000369454 GAGE12GP0CL81 117 aa8.28□□□□□ -1.08
RAB39B-201ENST00000369454 GAGE12IP0CL82 117 aa8.28□□□□□ -1.08
RAB39B-201ENST00000369454 PRO0461Q9UI25 63 aa8.28□□□□□ -1.08
RAB39B-201ENST00000369454 EIF4EBP3O60516 100 aaPredicted RBP8.28□□□□□ -1.08
RAB39B-201ENST00000369454 ADAMTSL4-AS1Q5T5F5 129 aa8.28□□□□□ -1.08
RAB39B-201ENST00000369454 TRGV2A0A075B6R0 118 aa8.28□□□□□ -1.08
RAB39B-201ENST00000369454 SMCPP49901 116 aaPredicted RBP8.28□□□□□ -1.08
RAB39B-201ENST00000369454 MRPS36P82909 103 aaKnown RBP8.28□□□□□ -1.08
RAB39B-201ENST00000369454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.27□□□□□ -1.09
RAB39B-201ENST00000369454 PYGO1Q9Y3Y4 419 aa8.27□□□□□ -1.09
RAB39B-201ENST00000369454 LOC100131303A0A0U1RQF7 123 aa8.27□□□□□ -1.09
RAB39B-201ENST00000369454 TMEM238C9JI98 176 aa8.27□□□□□ -1.09
RAB39B-201ENST00000369454 RS1O15537 224 aa8.27□□□□□ -1.09
RAB39B-201ENST00000369454 COX6A2Q02221 97 aa8.27□□□□□ -1.09
RAB39B-201ENST00000369454 SMAGPQ0VAQ4 97 aa8.27□□□□□ -1.09
RAB39B-201ENST00000369454 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
RAB39B-201ENST00000369454 FHL3Q13643 280 aa8.26□□□□□ -1.09
RAB39B-201ENST00000369454 TMEM86BQ8N661 226 aa8.26□□□□□ -1.09
RAB39B-201ENST00000369454 ERG28Q9UKR5 140 aa8.26□□□□□ -1.09
RAB39B-201ENST00000369454 BEAN1Q3B7T3 259 aa8.25□□□□□ -1.09
RAB39B-201ENST00000369454 SPANXA1Q9NS26 97 aa8.25□□□□□ -1.09
RAB39B-201ENST00000369454 UBE2D3P61077 147 aa8.25□□□□□ -1.09
RAB39B-201ENST00000369454 UBE2D2P62837 147 aa8.25□□□□□ -1.09
RAB39B-201ENST00000369454 VSIG2Q96IQ7 327 aa8.25□□□□□ -1.09
RAB39B-201ENST00000369454 J3QR89 54 aa8.25□□□□□ -1.09
RAB39B-201ENST00000369454 RPL36AP83881 106 aaKnown RBP8.25□□□□□ -1.09
RAB39B-201ENST00000369454 RPL36ALQ969Q0 106 aaKnown RBP8.25□□□□□ -1.09
RAB39B-201ENST00000369454 KRTAP1-1Q07627 177 aa8.24□□□□□ -1.09
RAB39B-201ENST00000369454 ATRQ13535 2644 aa8.24□□□□□ -1.09
RAB39B-201ENST00000369454 GAGE12HA6NDE8 117 aa8.24□□□□□ -1.09
RAB39B-201ENST00000369454 OTOGQ6ZRI0 2925 aa8.24□□□□□ -1.09
RAB39B-201ENST00000369454 C9JAW5 83 aa8.24□□□□□ -1.09
RAB39B-201ENST00000369454 IGHV3-33P01772 117 aa8.24□□□□□ -1.09
RAB39B-201ENST00000369454 NTM-AS1Q6ZSK4 140 aa8.24□□□□□ -1.09
RAB39B-201ENST00000369454 TINCRA0A1B0GVN0 87 aa8.23□□□□□ -1.09
RAB39B-201ENST00000369454 K7EQD1 137 aa8.23□□□□□ -1.09
RAB39B-201ENST00000369454 TMEM263Q8WUH6 116 aaKnown RBP8.23□□□□□ -1.09
RAB39B-201ENST00000369454 GIG44P09565 113 aaPredicted RBP8.23□□□□□ -1.09
RAB39B-201ENST00000369454 EDA2RQ9HAV5 297 aa8.23□□□□□ -1.09
RAB39B-201ENST00000369454 TRAV25A0A0B4J276 109 aa8.23□□□□□ -1.09
RAB39B-201ENST00000369454 DNAJC30Q96LL9 226 aa8.23□□□□□ -1.09
RAB39B-201ENST00000369454 TENM1Q9UKZ4 2725 aa8.22□□□□□ -1.09
RAB39B-201ENST00000369454 DEFB130BP0DP73 79 aa8.22□□□□□ -1.09
RAB39B-201ENST00000369454 DEFB130AP0DP74 79 aa8.22□□□□□ -1.09
RAB39B-201ENST00000369454 TMEM101Q96IK0 257 aa8.22□□□□□ -1.09
RAB39B-201ENST00000369454 LYRM7Q5U5X0 104 aa8.22□□□□□ -1.09
RAB39B-201ENST00000369454 LITAFQ99732 161 aa8.22□□□□□ -1.09
RAB39B-201ENST00000369454 TRGV4A0A0C4DH28 118 aa8.21□□□□□ -1.09
RAB39B-201ENST00000369454 FOXI1Q12951 378 aa8.21□□□□□ -1.09
RAB39B-201ENST00000369454 Q9H8V8 135 aa8.21□□□□□ -1.09
RAB39B-201ENST00000369454 ANK3Q12955 4377 aaKnown RBP8.21□□□□□ -1.09
RAB39B-201ENST00000369454 UBE2L6O14933 153 aa8.21□□□□□ -1.1
RAB39B-201ENST00000369454 LINC00242Q5T6M2 205 aa8.21□□□□□ -1.1
RAB39B-201ENST00000369454 C1QTNF4Q9BXJ3 329 aa8.21□□□□□ -1.1
RAB39B-201ENST00000369454 PIK3CD-AS1Q5SR53 167 aa8.2□□□□□ -1.1
RAB39B-201ENST00000369454 SIGMAR1Q99720 223 aa8.2□□□□□ -1.1
RAB39B-201ENST00000369454 GAGE6Q13070 117 aa8.2□□□□□ -1.1
RAB39B-201ENST00000369454 TEX29Q8N6K0 151 aa8.2□□□□□ -1.1
RAB39B-201ENST00000369454 RNASE1P07998 156 aaKnown RBP8.2□□□□□ -1.1
RAB39B-201ENST00000369454 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.19□□□□□ -1.1
RAB39B-201ENST00000369454 TRIAP1O43715 76 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 PF4P02776 101 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 ANKRD29Q8N6D5 301 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 TOMM7Q9P0U1 55 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 SLC25A20O43772 301 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 TRBV20-1A0A075B6N2 111 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 A0A096LPF7 62 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 TRAV4A0A0B4J268 109 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 J3QKU1 62 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 IGLV1-51P01701 117 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
RAB39B-201ENST00000369454 MIAQ16674 131 aa8.18□□□□□ -1.1
RAB39B-201ENST00000369454 ZFAND6Q6FIF0 208 aa8.18□□□□□ -1.1
RAB39B-201ENST00000369454 CLEC2BQ92478 149 aa8.18□□□□□ -1.1
RAB39B-201ENST00000369454 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
RAB39B-201ENST00000369454 A0A0B4J2C4 111 aa8.18□□□□□ -1.1
RAB39B-201ENST00000369454 CRYBA4P53673 196 aa8.18□□□□□ -1.1
RAB39B-201ENST00000369454 PRIMA1Q86XR5 153 aa8.18□□□□□ -1.1
RAB39B-201ENST00000369454 IL17DQ8TAD2 202 aa8.17□□□□□ -1.1
RAB39B-201ENST00000369454 PLAC8L1A1L4L8 177 aa8.17□□□□□ -1.1
RAB39B-201ENST00000369454 DEFB4AO15263 64 aa8.17□□□□□ -1.1
RAB39B-201ENST00000369454 DAZ2Q13117 558 aaKnown RBP8.17□□□□□ -1.1
RAB39B-201ENST00000369454 DAZ4Q86SG3 579 aaKnown RBP8.17□□□□□ -1.1
RAB39B-201ENST00000369454 TEN1Q86WV5 123 aa8.17□□□□□ -1.1
RAB39B-201ENST00000369454 SPATA3Q8NHX4 192 aa8.17□□□□□ -1.1
RAB39B-201ENST00000369454 CHCHD5Q9BSY4 110 aa8.17□□□□□ -1.1
RAB39B-201ENST00000369454 DAZ3Q9NR90 486 aaKnown RBP8.17□□□□□ -1.1
RAB39B-201ENST00000369454 C19orf73Q9NVV2 129 aa8.17□□□□□ -1.1
RAB39B-201ENST00000369454 RPL13AP40429 203 aaKnown RBP8.16□□□□□ -1.1
RAB39B-201ENST00000369454 HERVK_113P63121 156 aa8.16□□□□□ -1.1
RAB39B-201ENST00000369454 C16orf74Q96GX8 76 aa8.16□□□□□ -1.1
RAB39B-201ENST00000369454 TMEM243Q9BU79 118 aa8.16□□□□□ -1.1
RAB39B-201ENST00000369454 CDC42SE2Q9NRR3 84 aa8.16□□□□□ -1.1
RAB39B-201ENST00000369454 KRTAP10-3P60369 221 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms