RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 EML5Q05BV3 1969 aa9.96□□□□□ -0.82
PTPRK-204ENST00000368210 OPRPNQ99935 248 aaPredicted RBP9.96□□□□□ -0.82
PTPRK-204ENST00000368210 TMEM256-PLSCR3K7ERE1 68 aa9.96□□□□□ -0.82
PTPRK-204ENST00000368210 IGLV2-11P01706 119 aa9.95□□□□□ -0.82
PTPRK-204ENST00000368210 SPART-AS1P0CW21 52 aa9.95□□□□□ -0.82
PTPRK-204ENST00000368210 DAND5Q8N907 189 aa9.95□□□□□ -0.82
PTPRK-204ENST00000368210 ODF3Q96PU9 254 aa9.95□□□□□ -0.82
PTPRK-204ENST00000368210 CDIP1Q9H305 208 aa9.95□□□□□ -0.82
PTPRK-204ENST00000368210 COL5A1P20908 1838 aaPredicted RBP9.95□□□□□ -0.82
PTPRK-204ENST00000368210 IGHV1-58A0A0C4DH39 117 aa9.94□□□□□ -0.82
PTPRK-204ENST00000368210 NKAPP1Q8N9T2 125 aa9.94□□□□□ -0.82
PTPRK-204ENST00000368210 A0A0J9YXY3 114 aa9.94□□□□□ -0.82
PTPRK-204ENST00000368210 ZFAND2AQ8N6M9 145 aa9.94□□□□□ -0.82
PTPRK-204ENST00000368210 Q9HAA7 133 aa9.94□□□□□ -0.82
PTPRK-204ENST00000368210 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
PTPRK-204ENST00000368210 PRB2P02812 416 aaPredicted RBP9.94□□□□□ -0.82
PTPRK-204ENST00000368210 RPS28P62857 69 aaKnown RBP9.94□□□□□ -0.82
PTPRK-204ENST00000368210 NREPQ16612 68 aa9.94□□□□□ -0.82
PTPRK-204ENST00000368210 NEXN-AS1Q8NBZ9 246 aa9.94□□□□□ -0.82
PTPRK-204ENST00000368210 TMEM263Q8WUH6 116 aaKnown RBP9.94□□□□□ -0.82
PTPRK-204ENST00000368210 IGHV3-30-3P0DP02 117 aa9.93□□□□□ -0.82
PTPRK-204ENST00000368210 ESM1Q9NQ30 184 aa9.93□□□□□ -0.82
PTPRK-204ENST00000368210 HHLA3Q9XRX5 114 aa9.93□□□□□ -0.82
PTPRK-204ENST00000368210 CPAMD8Q8IZJ3 1885 aa9.93□□□□□ -0.82
PTPRK-204ENST00000368210 C10orf99Q6UWK7 81 aa9.93□□□□□ -0.82
PTPRK-204ENST00000368210 HIST2H2BCQ6DN03 193 aa9.92□□□□□ -0.82
PTPRK-204ENST00000368210 HIST2H2BDQ6DRA6 164 aa9.92□□□□□ -0.82
PTPRK-204ENST00000368210 ENHOQ6UWT2 76 aa9.92□□□□□ -0.82
PTPRK-204ENST00000368210 COX7B2Q8TF08 81 aa9.92□□□□□ -0.82
PTPRK-204ENST00000368210 U3KQK5 164 aa9.92□□□□□ -0.82
PTPRK-204ENST00000368210 IGLV10-54A0A075B6I4 117 aa9.92□□□□□ -0.82
PTPRK-204ENST00000368210 TRBV10-1A0A0K0K1A3 114 aa9.92□□□□□ -0.82
PTPRK-204ENST00000368210 LST1O00453 97 aa9.91□□□□□ -0.82
PTPRK-204ENST00000368210 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
PTPRK-204ENST00000368210 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
PTPRK-204ENST00000368210 DEFB135Q30KP9 77 aa9.91□□□□□ -0.82
PTPRK-204ENST00000368210 DEFB114Q30KQ6 69 aa9.91□□□□□ -0.82
PTPRK-204ENST00000368210 RMI2Q96E14 147 aa9.91□□□□□ -0.82
PTPRK-204ENST00000368210 EXPH5Q8NEV8 1989 aa9.91□□□□□ -0.82
PTPRK-204ENST00000368210 NFE4Q86UQ8 179 aa9.91□□□□□ -0.82
PTPRK-204ENST00000368210 KLK5Q9Y337 293 aaPredicted RBP9.91□□□□□ -0.82
PTPRK-204ENST00000368210 IGKV2D-24A0A075B6R9 120 aa9.9□□□□□ -0.82
PTPRK-204ENST00000368210 Q6JHZ5 121 aa9.9□□□□□ -0.82
PTPRK-204ENST00000368210 ZNF843Q8N446 348 aa9.9□□□□□ -0.83
PTPRK-204ENST00000368210 CEMP1Q6PRD7 247 aaPredicted RBP9.89□□□□□ -0.83
PTPRK-204ENST00000368210 PMAIP1Q13794 54 aa9.89□□□□□ -0.83
PTPRK-204ENST00000368210 DEFB4AO15263 64 aa9.89□□□□□ -0.83
PTPRK-204ENST00000368210 ZMAT4Q9H898 229 aa9.89□□□□□ -0.83
PTPRK-204ENST00000368210 UBE2D3P61077 147 aa9.88□□□□□ -0.83
PTPRK-204ENST00000368210 UBE2D2P62837 147 aa9.88□□□□□ -0.83
PTPRK-204ENST00000368210 Q6ZSV7 163 aa9.88□□□□□ -0.83
PTPRK-204ENST00000368210 RNF185Q96GF1 192 aa9.88□□□□□ -0.83
PTPRK-204ENST00000368210 H7C423 109 aa9.88□□□□□ -0.83
PTPRK-204ENST00000368210 Q6ZTI0 123 aa9.88□□□□□ -0.83
PTPRK-204ENST00000368210 FN1P02751 2386 aaKnown RBP9.88□□□□□ -0.83
PTPRK-204ENST00000368210 LRRK2Q5S007 2527 aa9.87□□□□□ -0.83
PTPRK-204ENST00000368210 PRO0255Q9UI72 69 aa9.87□□□□□ -0.83
PTPRK-204ENST00000368210 Q6ZS46 218 aa9.87□□□□□ -0.83
PTPRK-204ENST00000368210 SNURFQ9Y675 71 aa9.87□□□□□ -0.83
PTPRK-204ENST00000368210 UBE2D1P51668 147 aa9.86□□□□□ -0.83
PTPRK-204ENST00000368210 URB1-AS1Q96HZ7 61 aa9.85□□□□□ -0.83
PTPRK-204ENST00000368210 PSMG3-AS1Q96PY0 264 aa9.85□□□□□ -0.83
PTPRK-204ENST00000368210 TIRAPP58753 221 aa9.85□□□□□ -0.83
PTPRK-204ENST00000368210 C11orf21Q9P2W6 132 aa9.85□□□□□ -0.83
PTPRK-204ENST00000368210 TRBV7-7A0A0K0K1E9 115 aa9.84□□□□□ -0.83
PTPRK-204ENST00000368210 CAMK2N2Q96S95 79 aa9.84□□□□□ -0.83
PTPRK-204ENST00000368210 ZNF702PQ9H963 129 aa9.84□□□□□ -0.83
PTPRK-204ENST00000368210 PRRC2CQ9Y520 2896 aaKnown RBP9.84□□□□□ -0.83
PTPRK-204ENST00000368210 IGLV1-40P01703 118 aa9.84□□□□□ -0.83
PTPRK-204ENST00000368210 A0A1W2PPR1 153 aa9.83□□□□□ -0.84
PTPRK-204ENST00000368210 PIK3CD-AS1Q5SR53 167 aa9.83□□□□□ -0.84
PTPRK-204ENST00000368210 M0QY20 66 aa9.83□□□□□ -0.84
PTPRK-204ENST00000368210 HIGD2BQ4VC39 106 aa9.83□□□□□ -0.84
PTPRK-204ENST00000368210 PRR9Q5T870 116 aa9.83□□□□□ -0.84
PTPRK-204ENST00000368210 TRAV7A0A075B6U4 112 aa9.83□□□□□ -0.84
PTPRK-204ENST00000368210 TMEM223A0PJW6 202 aa9.83□□□□□ -0.84
PTPRK-204ENST00000368210 AVPP01185 164 aa9.82□□□□□ -0.84
PTPRK-204ENST00000368210 RNASE3P12724 160 aaKnown RBP9.82□□□□□ -0.84
PTPRK-204ENST00000368210 PCNTO95613 3336 aa9.82□□□□□ -0.84
PTPRK-204ENST00000368210 ZNF22P17026 224 aaPredicted RBP9.82□□□□□ -0.84
PTPRK-204ENST00000368210 DOPEY1Q5JWR5 2465 aa9.82□□□□□ -0.84
PTPRK-204ENST00000368210 MIR7-3HGQ8N6C7 128 aa9.81□□□□□ -0.84
PTPRK-204ENST00000368210 CRYGAP11844 174 aa9.81□□□□□ -0.84
PTPRK-204ENST00000368210 KLLNB2CW77 178 aa9.81□□□□□ -0.84
PTPRK-204ENST00000368210 UBE2BP63146 152 aa9.81□□□□□ -0.84
PTPRK-204ENST00000368210 KLK12Q9UKR0 248 aa9.81□□□□□ -0.84
PTPRK-204ENST00000368210 CCL18P55774 89 aa9.81□□□□□ -0.84
PTPRK-204ENST00000368210 LINC00467Q9BRT7 94 aa9.81□□□□□ -0.84
PTPRK-204ENST00000368210 NRACQ8N912 160 aa9.8□□□□□ -0.84
PTPRK-204ENST00000368210 TNRC6BQ9UPQ9 1833 aaKnown RBP9.8□□□□□ -0.84
PTPRK-204ENST00000368210 IGLV4-3A0A075B6K6 122 aa9.8□□□□□ -0.84
PTPRK-204ENST00000368210 A6NED7 52 aa9.8□□□□□ -0.84
PTPRK-204ENST00000368210 TRBV27A0A0K0K1C4 114 aa9.8□□□□□ -0.84
PTPRK-204ENST00000368210 MIFP14174 115 aa9.8□□□□□ -0.84
PTPRK-204ENST00000368210 FAM19A3Q7Z5A8 133 aa9.79□□□□□ -0.84
PTPRK-204ENST00000368210 BPY2O14599 106 aa9.79□□□□□ -0.84
PTPRK-204ENST00000368210 DCANP1Q8TF63 244 aa9.79□□□□□ -0.84
PTPRK-204ENST00000368210 CDKN2A-AS1Q9UH64 79 aa9.79□□□□□ -0.84
PTPRK-204ENST00000368210 MTORP42345 2549 aa9.79□□□□□ -0.84
PTPRK-204ENST00000368210 SPAG11BQ08648 103 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms