RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 SAA4P35542 130 aa8.85□□□□□ -0.99
PRKN-206ENST00000366898 CXCL5P42830 114 aa8.85□□□□□ -0.99
PRKN-206ENST00000366898 TACC2O95359 2948 aa8.85□□□□□ -0.99
PRKN-206ENST00000366898 BRI3O95415 125 aa8.84□□□□□ -0.99
PRKN-206ENST00000366898 LINC01619G3V211 115 aa8.84□□□□□ -0.99
PRKN-206ENST00000366898 IGLV1-47P01700 117 aa8.84□□□□□ -0.99
PRKN-206ENST00000366898 FUSP35637 526 aaKnown RBP eCLIP8.84□□□□□ -0.99
PRKN-206ENST00000366898 PRR4Q16378 134 aa8.84□□□□□ -0.99
PRKN-206ENST00000366898 SERP1Q9Y6X1 66 aa8.84□□□□□ -0.99
PRKN-206ENST00000366898 IGHV4-28A0A0C4DH34 117 aa8.84□□□□□ -0.99
PRKN-206ENST00000366898 ABCA2Q9BZC7 2435 aa8.83□□□□□ -1
PRKN-206ENST00000366898 ADORA2A-AS1P86434 159 aa8.83□□□□□ -1
PRKN-206ENST00000366898 TRBV6-1A0A0K0K1D8 114 aa8.83□□□□□ -1
PRKN-206ENST00000366898 UBE2E2Q96LR5 201 aa8.83□□□□□ -1
PRKN-206ENST00000366898 ZMAT4Q9H898 229 aa8.83□□□□□ -1
PRKN-206ENST00000366898 IGHV4-4A0A075B6R2 117 aa8.83□□□□□ -1
PRKN-206ENST00000366898 RAI1Q7Z5J4 1906 aaPredicted RBP8.82□□□□□ -1
PRKN-206ENST00000366898 PIK3CD-AS1Q5SR53 167 aa8.82□□□□□ -1
PRKN-206ENST00000366898 C5orf38Q86SI9 138 aa8.82□□□□□ -1
PRKN-206ENST00000366898 MIR7-3HGQ8N6C7 128 aa8.82□□□□□ -1
PRKN-206ENST00000366898 ATP6V0E1O15342 81 aa8.82□□□□□ -1
PRKN-206ENST00000366898 C20orf203Q8NBC4 194 aa8.82□□□□□ -1
PRKN-206ENST00000366898 JMJD7-PLA2G4BH0Y9G9 81 aa8.82□□□□□ -1
PRKN-206ENST00000366898 HIST2H2BCQ6DN03 193 aa8.82□□□□□ -1
PRKN-206ENST00000366898 HIST2H2BDQ6DRA6 164 aa8.82□□□□□ -1
PRKN-206ENST00000366898 MAPK1IP1LQ8NDC0 245 aa8.82□□□□□ -1
PRKN-206ENST00000366898 ZZEF1O43149 2961 aa8.82□□□□□ -1
PRKN-206ENST00000366898 ABCA12Q86UK0 2595 aa8.81□□□□□ -1
PRKN-206ENST00000366898 RPS28P62857 69 aaKnown RBP8.81□□□□□ -1
PRKN-206ENST00000366898 CCL19Q99731 98 aa8.81□□□□□ -1
PRKN-206ENST00000366898 NRACQ8N912 160 aa8.81□□□□□ -1
PRKN-206ENST00000366898 LINC00574Q9H8X3 128 aa8.81□□□□□ -1
PRKN-206ENST00000366898 PKD1L2Q7Z442 2459 aa8.81□□□□□ -1
PRKN-206ENST00000366898 TRBV7-7A0A0K0K1E9 115 aa8.8□□□□□ -1
PRKN-206ENST00000366898 TMEM223A0PJW6 202 aa8.8□□□□□ -1
PRKN-206ENST00000366898 CTSGP08311 255 aa8.8□□□□□ -1
PRKN-206ENST00000366898 ZFP36P26651 326 aaKnown RBP8.8□□□□□ -1
PRKN-206ENST00000366898 J3QKU1 62 aa8.8□□□□□ -1
PRKN-206ENST00000366898 TSPEAR-AS2P59090 65 aa8.8□□□□□ -1
PRKN-206ENST00000366898 CDKN2A-AS1Q9UH64 79 aa8.8□□□□□ -1
PRKN-206ENST00000366898 IGF1P05019 195 aa8.79□□□□□ -1
PRKN-206ENST00000366898 XCL1P47992 114 aa8.79□□□□□ -1
PRKN-206ENST00000366898 BLCAPP62952 87 aa8.79□□□□□ -1
PRKN-206ENST00000366898 SIRPDQ9H106 197 aa8.79□□□□□ -1
PRKN-206ENST00000366898 XCL2Q9UBD3 114 aa8.79□□□□□ -1
PRKN-206ENST00000366898 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
PRKN-206ENST00000366898 LINC00308Q8TCZ7 52 aa8.79□□□□□ -1
PRKN-206ENST00000366898 CFHR3Q02985 330 aa8.78□□□□□ -1
PRKN-206ENST00000366898 CRYGAP11844 174 aa8.78□□□□□ -1
PRKN-206ENST00000366898 LRBAP50851 2863 aa8.78□□□□□ -1
PRKN-206ENST00000366898 PRRC2AP48634 2157 aaKnown RBP8.78□□□□□ -1
PRKN-206ENST00000366898 H3BUX3 64 aa8.77□□□□□ -1
PRKN-206ENST00000366898 HILS1P60008 231 aa8.77□□□□□ -1.01
PRKN-206ENST00000366898 NREPQ16612 68 aa8.77□□□□□ -1.01
PRKN-206ENST00000366898 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
PRKN-206ENST00000366898 PSPHP1O15172 72 aa8.76□□□□□ -1.01
PRKN-206ENST00000366898 DEFB131AP59861 70 aa8.76□□□□□ -1.01
PRKN-206ENST00000366898 HTN3P15516 51 aa8.76□□□□□ -1.01
PRKN-206ENST00000366898 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
PRKN-206ENST00000366898 ZNF580Q9UK33 172 aa8.76□□□□□ -1.01
PRKN-206ENST00000366898 POM121L12Q8N7R1 296 aa8.76□□□□□ -1.01
PRKN-206ENST00000366898 C11orf21Q9P2W6 132 aa8.76□□□□□ -1.01
PRKN-206ENST00000366898 FN1P02751 2386 aaKnown RBP8.75□□□□□ -1.01
PRKN-206ENST00000366898 HOXB4P17483 251 aaPredicted RBP8.75□□□□□ -1.01
PRKN-206ENST00000366898 FAM19A1Q7Z5A9 133 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 A0A1W2PRX2 142 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 FAM223BA6NKX1 122 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 MINOS1Q5TGZ0 78 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 Q6JHZ5 121 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 RMI2Q96E14 147 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 LENEPQ9Y5L5 61 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 MINOS1-NBL1R4GNA1 71 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 IGHV7-81A0A0B4J1V7 117 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 IGHV1-69P01742 117 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 FAM19A4Q96LR4 140 aa8.75□□□□□ -1.01
PRKN-206ENST00000366898 DEFB105AQ8NG35 78 aa8.74□□□□□ -1.01
PRKN-206ENST00000366898 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
PRKN-206ENST00000366898 STHQ8IWL8 128 aa8.74□□□□□ -1.01
PRKN-206ENST00000366898 FAM110DQ8TAY7 271 aaPredicted RBP8.74□□□□□ -1.01
PRKN-206ENST00000366898 TMEM256-PLSCR3K7ERE1 68 aa8.74□□□□□ -1.01
PRKN-206ENST00000366898 NANOS2P60321 138 aaKnown RBP8.74□□□□□ -1.01
PRKN-206ENST00000366898 MRPL53Q96EL3 112 aaKnown RBP8.74□□□□□ -1.01
PRKN-206ENST00000366898 COL12A1Q99715 3063 aa8.73□□□□□ -1.01
PRKN-206ENST00000366898 SS18Q15532 418 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 PRORYQ9H606 182 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 IGLV11-55A0A075B6I3 123 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 MIFP14174 115 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 PTPRBP23467 1997 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 MTORP42345 2549 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 LINC00846Q9NV44 126 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 TRBV7-6A0A0J9YX20 115 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 CHKB-CPT1BH3BT56 60 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 C19orf84I3L1E1 186 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 IL17DQ8TAD2 202 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 TRBV27A0A0K0K1C4 114 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 CLPSL1A2RUU4 121 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 ATP5EP2Q5VTU8 51 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 C9orf47Q6ZRZ4 202 aa8.72□□□□□ -1.01
PRKN-206ENST00000366898 NDUFC1O43677 76 aa8.71□□□□□ -1.01
PRKN-206ENST00000366898 Q8N9W7 124 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms