RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 IMMP2LQ96T52 175 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 TRGV9Q99603 122 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 HIST1H2BLQ99880 126 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 TMEM147Q9BVK8 224 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
H3F3A-201ENST00000366813 TRAV4A0A0B4J268 109 aa4.21□□□□□ -1.74
H3F3A-201ENST00000366813 IFNA1P01562 189 aa4.21□□□□□ -1.74
H3F3A-201ENST00000366813 HLA-DQA1P01909 254 aa4.21□□□□□ -1.74
H3F3A-201ENST00000366813 TRGC2P03986 189 aa4.21□□□□□ -1.74
H3F3A-201ENST00000366813 RPL7P18124 248 aaKnown RBP4.21□□□□□ -1.74
H3F3A-201ENST00000366813 S100GP29377 79 aa4.21□□□□□ -1.74
H3F3A-201ENST00000366813 SP6Q3SY56 376 aa4.21□□□□□ -1.74
H3F3A-201ENST00000366813 NIT1Q86X76 327 aa4.21□□□□□ -1.74
H3F3A-201ENST00000366813 SLC25A29Q8N8R3 303 aa4.21□□□□□ -1.74
H3F3A-201ENST00000366813 PACRGQ96M98 296 aaPredicted RBP4.21□□□□□ -1.74
H3F3A-201ENST00000366813 ODF3Q96PU9 254 aa4.21□□□□□ -1.74
H3F3A-201ENST00000366813 ZNF331Q9NQX6 463 aaPredicted RBP4.21□□□□□ -1.74
H3F3A-201ENST00000366813 NAT8Q9UHE5 227 aa4.21□□□□□ -1.74
H3F3A-201ENST00000366813 IGHV3-64A0A075B6Q5 118 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 TGIF2-C20orf24A0A0A6YYL0 155 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 SMCO3A2RU48 225 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 ZNF727A8MUV8 499 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 H3BRN7 92 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 GZMBP10144 247 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 CNBPP62633 177 aaKnown RBP4.2□□□□□ -1.74
H3F3A-201ENST00000366813 ERCC8Q13216 396 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 ATP6V1FQ16864 119 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 MAJINQ3KP22 176 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 KCNIP4Q6PIL6 250 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 TMEM75Q8N9X5 138 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 SHANK2-AS3Q9BTD1 123 aa4.2□□□□□ -1.74
H3F3A-201ENST00000366813 USH2AO75445 5202 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 TRAV9-1A0A075B6T8 112 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 SLC17A3O00476 420 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 SSSCA1O60232 199 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 TSPAN13O95857 204 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 MBP02144 154 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 ESDP10768 282 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 HBG1P69891 147 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 HBG2P69892 147 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 ZNF726P1Q15940 193 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 PRR9Q5T870 116 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 TMEM14EPQ6UXP3 125 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 PRADC1Q9BSG0 188 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 WDR61Q9GZS3 305 aaKnown RBP4.19□□□□□ -1.74
H3F3A-201ENST00000366813 MANBALQ9NQG1 85 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.19□□□□□ -1.74
H3F3A-201ENST00000366813 URGCP-MRPS24S4R325 110 aa4.19□□□□□ -1.74
H3F3A-201ENST00000366813 IGHV3-73A0A0B4J1V6 119 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 IGKV2-24A0A0C4DH68 120 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 CTXND1A0A1B0GTU2 59 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 H0Y9J4 135 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 K7EQM0 130 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 MRPS12O15235 138 aaKnown RBP4.18□□□□□ -1.74
H3F3A-201ENST00000366813 SYNGR2O43760 224 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 GPX1P07203 203 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 FABP4P15090 132 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 RAB4AP20338 218 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 RAB11AP62491 216 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 IQCJQ1A5X6 159 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 TMEM241Q24JQ0 296 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 ENHOQ6UWT2 76 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 KRTAP11-1Q8IUC1 163 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 SCGB1C1Q8TD33 95 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 PGLYRP4Q96LB8 373 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 KRTAP4-1Q9BYQ7 146 aa4.18□□□□□ -1.74
H3F3A-201ENST00000366813 A0A1B0GV90 55 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 MAP1LC3B2A6NCE7 125 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 CST7O76096 145 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 METTL15P1P0C7V9 234 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 CRYGAP11844 174 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 RPL23P62829 140 aaKnown RBP4.17□□□□□ -1.74
H3F3A-201ENST00000366813 MEF2BQ02080 365 aaPredicted RBP4.17□□□□□ -1.74
H3F3A-201ENST00000366813 COX6A2Q02221 97 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 Q0VG73 95 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 RHOHQ15669 191 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 TMEM183BQ1AE95 376 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 LCN15Q6UWW0 184 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 FAM19A4Q96LR4 140 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 MAP1LC3BQ9GZQ8 125 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 HIGD1AQ9Y241 93 aa4.17□□□□□ -1.74
H3F3A-201ENST00000366813 A0A0J9YXY3 114 aa4.16□□□□□ -1.74
H3F3A-201ENST00000366813 TRBV6-4A0A1B0GX49 114 aa4.16□□□□□ -1.74
H3F3A-201ENST00000366813 OR5G3P0C626 314 aa4.16□□□□□ -1.74
H3F3A-201ENST00000366813 S100A7P31151 101 aa4.16□□□□□ -1.74
H3F3A-201ENST00000366813 SELENOTP62341 195 aa4.16□□□□□ -1.74
H3F3A-201ENST00000366813 ZFAND2AQ8N6M9 145 aa4.16□□□□□ -1.74
H3F3A-201ENST00000366813 SMIM7Q9BQ49 75 aa4.16□□□□□ -1.74
H3F3A-201ENST00000366813 SLC50A1Q9BRV3 221 aa4.16□□□□□ -1.74
H3F3A-201ENST00000366813 GNG13Q9P2W3 67 aa4.16□□□□□ -1.74
H3F3A-201ENST00000366813 ARL2-SNX15V9GYD0 113 aa4.16□□□□□ -1.74
H3F3A-201ENST00000366813 A0A087WX48 190 aa4.15□□□□□ -1.75
H3F3A-201ENST00000366813 F6UZH7 168 aa4.15□□□□□ -1.75
H3F3A-201ENST00000366813 M0R143 59 aa4.15□□□□□ -1.75
H3F3A-201ENST00000366813 PDE6DO43924 150 aa4.15□□□□□ -1.75
H3F3A-201ENST00000366813 HYPMO75409 117 aa4.15□□□□□ -1.75
H3F3A-201ENST00000366813 LINC00614P0C842 121 aa4.15□□□□□ -1.75
H3F3A-201ENST00000366813 MT1HP80294 61 aa4.15□□□□□ -1.75
H3F3A-201ENST00000366813 CHCHD10Q8WYQ3 142 aaPredicted RBP4.15□□□□□ -1.75
H3F3A-201ENST00000366813 CIB3Q96Q77 187 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms