RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 LINC00308Q8TCZ7 52 aa8.82□□□□□ -1
CDC42BPA-202ENST00000366764 MAP6D1Q9H9H5 199 aa8.82□□□□□ -1
CDC42BPA-202ENST00000366764 Q6Q795 121 aa8.82□□□□□ -1
CDC42BPA-202ENST00000366764 RNF183Q96D59 192 aa8.82□□□□□ -1
CDC42BPA-202ENST00000366764 TRANK1O15050 2925 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 LINC01548A6NM66 108 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 LST1O00453 97 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 UBE2D1P51668 147 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 DEFB1P60022 68 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 ZNF580Q9UK33 172 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 CLPSL1A2RUU4 121 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 LINC01546A6NGU7 62 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 C9orf66Q5T8R8 295 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 CDKN2A-AS1Q9UH64 79 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 MRGPRG-AS1Q2M3A8 158 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 TSHBP01222 138 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 SPART-AS1P0CW21 52 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 LINC00467Q9BRT7 94 aa8.81□□□□□ -1
CDC42BPA-202ENST00000366764 INSL3P51460 131 aa8.8□□□□□ -1
CDC42BPA-202ENST00000366764 PSMB8P28062 276 aa8.8□□□□□ -1
CDC42BPA-202ENST00000366764 C1orf43Q9BWL3 253 aa8.8□□□□□ -1
CDC42BPA-202ENST00000366764 CRIP2P52943 208 aaPredicted RBP8.8□□□□□ -1
CDC42BPA-202ENST00000366764 C11orf21Q9P2W6 132 aa8.8□□□□□ -1
CDC42BPA-202ENST00000366764 UBE2D3P61077 147 aa8.79□□□□□ -1
CDC42BPA-202ENST00000366764 UBE2D2P62837 147 aa8.79□□□□□ -1
CDC42BPA-202ENST00000366764 IGIPA6NJ69 53 aa8.79□□□□□ -1
CDC42BPA-202ENST00000366764 SMIM9A6NGZ8 99 aa8.79□□□□□ -1
CDC42BPA-202ENST00000366764 PSCAO43653 123 aa8.78□□□□□ -1
CDC42BPA-202ENST00000366764 MUC7Q8TAX7 377 aa8.78□□□□□ -1
CDC42BPA-202ENST00000366764 UBE2DNLQ8IWF7 75 aa8.78□□□□□ -1
CDC42BPA-202ENST00000366764 PRO0255Q9UI72 69 aa8.78□□□□□ -1
CDC42BPA-202ENST00000366764 CLPSL2Q6UWE3 100 aa8.78□□□□□ -1
CDC42BPA-202ENST00000366764 IGLV1-40P01703 118 aa8.78□□□□□ -1
CDC42BPA-202ENST00000366764 IGKV3D-7A0A0C4DH55 119 aa8.77□□□□□ -1
CDC42BPA-202ENST00000366764 DCANP1Q8TF63 244 aa8.77□□□□□ -1.01
CDC42BPA-202ENST00000366764 A0A096LNJ9 63 aa8.77□□□□□ -1.01
CDC42BPA-202ENST00000366764 PRR9Q5T870 116 aa8.77□□□□□ -1.01
CDC42BPA-202ENST00000366764 C3orf22Q8N5N4 141 aa8.76□□□□□ -1.01
CDC42BPA-202ENST00000366764 CAMK2N2Q96S95 79 aa8.76□□□□□ -1.01
CDC42BPA-202ENST00000366764 DIRC1Q969H9 104 aa8.76□□□□□ -1.01
CDC42BPA-202ENST00000366764 AKAP13Q12802 2813 aa8.76□□□□□ -1.01
CDC42BPA-202ENST00000366764 DEFB114Q30KQ6 69 aa8.75□□□□□ -1.01
CDC42BPA-202ENST00000366764 RS1O15537 224 aa8.75□□□□□ -1.01
CDC42BPA-202ENST00000366764 CRYGDP07320 174 aa8.75□□□□□ -1.01
CDC42BPA-202ENST00000366764 SPAG11BQ08648 103 aa8.75□□□□□ -1.01
CDC42BPA-202ENST00000366764 C14orf132Q9NPU4 83 aa8.75□□□□□ -1.01
CDC42BPA-202ENST00000366764 FLNAP21333 2647 aaKnown RBP8.75□□□□□ -1.01
CDC42BPA-202ENST00000366764 TRBV6-4A0A1B0GX49 114 aa8.75□□□□□ -1.01
CDC42BPA-202ENST00000366764 Q6YL49 198 aa8.75□□□□□ -1.01
CDC42BPA-202ENST00000366764 Q6ZQT7 251 aa8.75□□□□□ -1.01
CDC42BPA-202ENST00000366764 CEMP1Q6PRD7 247 aaPredicted RBP8.74□□□□□ -1.01
CDC42BPA-202ENST00000366764 LRRC75A-AS1Q8N1F1 130 aa8.74□□□□□ -1.01
CDC42BPA-202ENST00000366764 PRORYQ9H606 182 aa8.74□□□□□ -1.01
CDC42BPA-202ENST00000366764 NREPQ16612 68 aa8.74□□□□□ -1.01
CDC42BPA-202ENST00000366764 IGLV2-18A0A075B6J9 118 aa8.74□□□□□ -1.01
CDC42BPA-202ENST00000366764 FLNBO75369 2602 aaKnown RBP8.74□□□□□ -1.01
CDC42BPA-202ENST00000366764 LYRM9A8MSI8 78 aa8.74□□□□□ -1.01
CDC42BPA-202ENST00000366764 ATP5EP56381 51 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPA-202ENST00000366764 NDUFA7O95182 113 aa8.73□□□□□ -1.01
CDC42BPA-202ENST00000366764 ETDCA0A1B0GVM5 59 aa8.73□□□□□ -1.01
CDC42BPA-202ENST00000366764 NDUFC2O95298 119 aa8.73□□□□□ -1.01
CDC42BPA-202ENST00000366764 XGP55808 180 aa8.73□□□□□ -1.01
CDC42BPA-202ENST00000366764 C3orf56Q8N813 242 aa8.72□□□□□ -1.01
CDC42BPA-202ENST00000366764 F8W735 103 aaPredicted RBP8.72□□□□□ -1.01
CDC42BPA-202ENST00000366764 GAS8-AS1O95177 125 aa8.72□□□□□ -1.01
CDC42BPA-202ENST00000366764 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
CDC42BPA-202ENST00000366764 COX17Q14061 63 aa8.72□□□□□ -1.01
CDC42BPA-202ENST00000366764 Q6ZTI0 123 aa8.72□□□□□ -1.01
CDC42BPA-202ENST00000366764 ZNF292O60281 2723 aa8.71□□□□□ -1.01
CDC42BPA-202ENST00000366764 UBE2D4Q9Y2X8 147 aa8.71□□□□□ -1.01
CDC42BPA-202ENST00000366764 IGLV4-69A0A075B6H9 119 aa8.71□□□□□ -1.02
CDC42BPA-202ENST00000366764 NDUFC1O43677 76 aa8.71□□□□□ -1.02
CDC42BPA-202ENST00000366764 MP68P56378 58 aa8.71□□□□□ -1.02
CDC42BPA-202ENST00000366764 COX7BP24311 80 aa8.71□□□□□ -1.02
CDC42BPA-202ENST00000366764 IGLV10-54A0A075B6I4 117 aa8.71□□□□□ -1.02
CDC42BPA-202ENST00000366764 HIGD2BQ4VC39 106 aa8.7□□□□□ -1.02
CDC42BPA-202ENST00000366764 SERP2Q8N6R1 65 aa8.7□□□□□ -1.02
CDC42BPA-202ENST00000366764 UPK3BQ9BT76 320 aa8.7□□□□□ -1.02
CDC42BPA-202ENST00000366764 TRBV6-8A0A0A6YYG3 113 aa8.7□□□□□ -1.02
CDC42BPA-202ENST00000366764 CSDC2Q9Y534 153 aaKnown RBP8.7□□□□□ -1.02
CDC42BPA-202ENST00000366764 Q9HAA7 133 aa8.7□□□□□ -1.02
CDC42BPA-202ENST00000366764 A0A096LPF7 62 aa8.7□□□□□ -1.02
CDC42BPA-202ENST00000366764 IGKV2D-24A0A075B6R9 120 aa8.69□□□□□ -1.02
CDC42BPA-202ENST00000366764 Q6ZS46 218 aa8.69□□□□□ -1.02
CDC42BPA-202ENST00000366764 DNAJC9-AS1A6NH13 148 aa8.68□□□□□ -1.02
CDC42BPA-202ENST00000366764 AMELXQ99217 191 aa8.68□□□□□ -1.02
CDC42BPA-202ENST00000366764 PCNTO95613 3336 aa8.67□□□□□ -1.02
CDC42BPA-202ENST00000366764 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
CDC42BPA-202ENST00000366764 J3QKU1 62 aa8.66□□□□□ -1.02
CDC42BPA-202ENST00000366764 REG3AQ06141 175 aa8.66□□□□□ -1.02
CDC42BPA-202ENST00000366764 SDIM1Q6ZPB5 146 aa8.66□□□□□ -1.02
CDC42BPA-202ENST00000366764 COX7CP15954 63 aa8.65□□□□□ -1.02
CDC42BPA-202ENST00000366764 CD164L2Q6UWJ8 174 aa8.65□□□□□ -1.02
CDC42BPA-202ENST00000366764 CITED2Q99967 270 aaPredicted RBP8.65□□□□□ -1.02
CDC42BPA-202ENST00000366764 IGHV4-31P0DP07 118 aa8.65□□□□□ -1.03
CDC42BPA-202ENST00000366764 Q6JHZ5 121 aa8.65□□□□□ -1.03
CDC42BPA-202ENST00000366764 CHCHD10Q8WYQ3 142 aaPredicted RBP8.65□□□□□ -1.03
CDC42BPA-202ENST00000366764 ATRQ13535 2644 aa8.64□□□□□ -1.03
CDC42BPA-202ENST00000366764 DEFB135Q30KP9 77 aa8.64□□□□□ -1.03
CDC42BPA-202ENST00000366764 KLK12Q9UKR0 248 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms