RNA–Protein interactions for RNA: ENST00000366690.4

RAB4A-201, Transcript of RAB4A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB4A, Length 2,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-201ENST00000366690 ATP6V0E2Q8NHE4 81 aa13.37□□□□□ -0.27
RAB4A-201ENST00000366690 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
RAB4A-201ENST00000366690 ODF3L2Q3SX64 289 aa13.36□□□□□ -0.27
RAB4A-201ENST00000366690 HIST2H2BCQ6DN03 193 aa13.36□□□□□ -0.27
RAB4A-201ENST00000366690 RNF152Q8N8N0 203 aa13.36□□□□□ -0.27
RAB4A-201ENST00000366690 NTN5Q8WTR8 489 aaPredicted RBP13.36□□□□□ -0.27
RAB4A-201ENST00000366690 ITPR2Q14571 2701 aa13.35□□□□□ -0.27
RAB4A-201ENST00000366690 A0A0B4J2C4 111 aa13.35□□□□□ -0.27
RAB4A-201ENST00000366690 C4orf3Q8WVX3 66 aa13.35□□□□□ -0.27
RAB4A-201ENST00000366690 CLEC2BQ92478 149 aa13.35□□□□□ -0.27
RAB4A-201ENST00000366690 WFDC10AQ9H1F0 79 aa13.35□□□□□ -0.27
RAB4A-201ENST00000366690 TRAV13-1A0A0B4J241 112 aa13.35□□□□□ -0.27
RAB4A-201ENST00000366690 TEX49A0A1B0GTD5 131 aa13.34□□□□□ -0.27
RAB4A-201ENST00000366690 Q6ZTI0 123 aa13.34□□□□□ -0.27
RAB4A-201ENST00000366690 STHQ8IWL8 128 aa13.34□□□□□ -0.27
RAB4A-201ENST00000366690 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.33□□□□□ -0.28
RAB4A-201ENST00000366690 TINCRA0A1B0GVN0 87 aa13.33□□□□□ -0.28
RAB4A-201ENST00000366690 TENM4Q6N022 2769 aa13.33□□□□□ -0.28
RAB4A-201ENST00000366690 PLA2G2AP14555 144 aa13.33□□□□□ -0.28
RAB4A-201ENST00000366690 CKS1BP61024 79 aa13.33□□□□□ -0.28
RAB4A-201ENST00000366690 DEFB113Q30KQ7 82 aa13.33□□□□□ -0.28
RAB4A-201ENST00000366690 SPANXA1Q9NS26 97 aa13.32□□□□□ -0.28
RAB4A-201ENST00000366690 C1orf158Q8N1D5 194 aa13.32□□□□□ -0.28
RAB4A-201ENST00000366690 LINC01620Q4KN68 170 aa13.32□□□□□ -0.28
RAB4A-201ENST00000366690 TMEM101Q96IK0 257 aa13.32□□□□□ -0.28
RAB4A-201ENST00000366690 GAGE12JA6NER3 117 aa13.31□□□□□ -0.28
RAB4A-201ENST00000366690 GAGE4Q13068 117 aa13.31□□□□□ -0.28
RAB4A-201ENST00000366690 GAGE5Q13069 117 aa13.31□□□□□ -0.28
RAB4A-201ENST00000366690 SBSPONQ8IVN8 264 aa13.31□□□□□ -0.28
RAB4A-201ENST00000366690 CRYBA4P53673 196 aa13.31□□□□□ -0.28
RAB4A-201ENST00000366690 CIDEAO60543 219 aa13.3□□□□□ -0.28
RAB4A-201ENST00000366690 MIAQ16674 131 aa13.3□□□□□ -0.28
RAB4A-201ENST00000366690 ICOSQ9Y6W8 199 aa13.3□□□□□ -0.28
RAB4A-201ENST00000366690 IGKV3OR2-268A0A0C4DH90 116 aa13.3□□□□□ -0.28
RAB4A-201ENST00000366690 A8MTW9 85 aa13.3□□□□□ -0.28
RAB4A-201ENST00000366690 ATXN8Q156A1 80 aa13.3□□□□□ -0.28
RAB4A-201ENST00000366690 WFDC11Q8NEX6 87 aa13.3□□□□□ -0.28
RAB4A-201ENST00000366690 SCGB1A1P11684 91 aa13.29□□□□□ -0.28
RAB4A-201ENST00000366690 Q9H8V8 135 aa13.29□□□□□ -0.28
RAB4A-201ENST00000366690 RPL13AP40429 203 aaKnown RBP13.29□□□□□ -0.28
RAB4A-201ENST00000366690 EDA2RQ9HAV5 297 aa13.29□□□□□ -0.28
RAB4A-201ENST00000366690 RS1O15537 224 aa13.29□□□□□ -0.28
RAB4A-201ENST00000366690 NOP10Q9NPE3 64 aaKnown RBP13.29□□□□□ -0.28
RAB4A-201ENST00000366690 LOC100131303A0A0U1RQF7 123 aa13.27□□□□□ -0.28
RAB4A-201ENST00000366690 RPL35AP18077 110 aaKnown RBP13.27□□□□□ -0.28
RAB4A-201ENST00000366690 ZFAND6Q6FIF0 208 aa13.27□□□□□ -0.28
RAB4A-201ENST00000366690 Q8N2B8 174 aa13.27□□□□□ -0.28
RAB4A-201ENST00000366690 DNAJC9-AS1A6NH13 148 aa13.27□□□□□ -0.29
RAB4A-201ENST00000366690 NTM-AS1Q6ZSK4 140 aa13.27□□□□□ -0.29
RAB4A-201ENST00000366690 A0A1B0GV72 72 aa13.26□□□□□ -0.29
RAB4A-201ENST00000366690 BEAN1Q3B7T3 259 aa13.26□□□□□ -0.29
RAB4A-201ENST00000366690 LINC00242Q5T6M2 205 aa13.26□□□□□ -0.29
RAB4A-201ENST00000366690 ESM1Q9NQ30 184 aa13.26□□□□□ -0.29
RAB4A-201ENST00000366690 NOTCH2Q04721 2471 aa13.26□□□□□ -0.29
RAB4A-201ENST00000366690 CITED2Q99967 270 aaPredicted RBP13.26□□□□□ -0.29
RAB4A-201ENST00000366690 ZNF843Q8N446 348 aa13.26□□□□□ -0.29
RAB4A-201ENST00000366690 CCL24O00175 119 aa13.25□□□□□ -0.29
RAB4A-201ENST00000366690 C2orf82Q6UX34 121 aa13.25□□□□□ -0.29
RAB4A-201ENST00000366690 SPANXDQ9BXN6 97 aa13.25□□□□□ -0.29
RAB4A-201ENST00000366690 SPANXCQ9NY87 97 aa13.25□□□□□ -0.29
RAB4A-201ENST00000366690 HIVEP2P31629 2446 aa13.24□□□□□ -0.29
RAB4A-201ENST00000366690 TRBV30A0A0K0K1B3 111 aa13.24□□□□□ -0.29
RAB4A-201ENST00000366690 GAGE7O76087 117 aa13.23□□□□□ -0.29
RAB4A-201ENST00000366690 GAGE12FP0CL80 117 aa13.23□□□□□ -0.29
RAB4A-201ENST00000366690 GAGE12GP0CL81 117 aa13.23□□□□□ -0.29
RAB4A-201ENST00000366690 GAGE12IP0CL82 117 aa13.23□□□□□ -0.29
RAB4A-201ENST00000366690 KRTAP1-3Q8IUG1 177 aa13.23□□□□□ -0.29
RAB4A-201ENST00000366690 H7C423 109 aa13.23□□□□□ -0.29
RAB4A-201ENST00000366690 CRLF1O75462 422 aa13.23□□□□□ -0.29
RAB4A-201ENST00000366690 DNAJC30Q96LL9 226 aa13.23□□□□□ -0.29
RAB4A-201ENST00000366690 MEIG1Q5JSS6 88 aa13.22□□□□□ -0.29
RAB4A-201ENST00000366690 K7EQD1 137 aa13.22□□□□□ -0.29
RAB4A-201ENST00000366690 RPL36AP83881 106 aaKnown RBP13.22□□□□□ -0.29
RAB4A-201ENST00000366690 RPL36ALQ969Q0 106 aaKnown RBP13.22□□□□□ -0.29
RAB4A-201ENST00000366690 TRBV10-2A0A0K0K1G8 114 aa13.21□□□□□ -0.29
RAB4A-201ENST00000366690 PRIMA1Q86XR5 153 aa13.21□□□□□ -0.29
RAB4A-201ENST00000366690 VWFP04275 2813 aa13.21□□□□□ -0.3
RAB4A-201ENST00000366690 TRGV2A0A075B6R0 118 aa13.2□□□□□ -0.3
RAB4A-201ENST00000366690 SOSTDC1Q6X4U4 206 aa13.2□□□□□ -0.3
RAB4A-201ENST00000366690 NDUFA1O15239 70 aa13.2□□□□□ -0.3
RAB4A-201ENST00000366690 TRAV26-1A0A087WT03 109 aa13.2□□□□□ -0.3
RAB4A-201ENST00000366690 SMIM1B2RUZ4 78 aa13.2□□□□□ -0.3
RAB4A-201ENST00000366690 COX6CP09669 75 aa13.2□□□□□ -0.3
RAB4A-201ENST00000366690 LINC00308Q8TCZ7 52 aa13.2□□□□□ -0.3
RAB4A-201ENST00000366690 TRAV4A0A0B4J268 109 aa13.19□□□□□ -0.3
RAB4A-201ENST00000366690 PIK3CD-AS1Q5SR53 167 aa13.19□□□□□ -0.3
RAB4A-201ENST00000366690 UBE2WQ96B02 151 aa13.19□□□□□ -0.3
RAB4A-201ENST00000366690 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
RAB4A-201ENST00000366690 TIRAPP58753 221 aa13.18□□□□□ -0.3
RAB4A-201ENST00000366690 HERVK_113P63121 156 aa13.18□□□□□ -0.3
RAB4A-201ENST00000366690 CIRBPQ14011 172 aaKnown RBP13.17□□□□□ -0.3
RAB4A-201ENST00000366690 HELZ2Q9BYK8 2649 aaKnown RBP13.17□□□□□ -0.3
RAB4A-201ENST00000366690 GIG44P09565 113 aaPredicted RBP13.17□□□□□ -0.3
RAB4A-201ENST00000366690 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
RAB4A-201ENST00000366690 UBE2L6O14933 153 aa13.17□□□□□ -0.3
RAB4A-201ENST00000366690 RNF183Q96D59 192 aa13.17□□□□□ -0.3
RAB4A-201ENST00000366690 YAE1D1Q9NRH1 226 aa13.17□□□□□ -0.3
RAB4A-201ENST00000366690 IGLV5-45A0A087WSX0 123 aa13.16□□□□□ -0.3
RAB4A-201ENST00000366690 TRAV8-4A0A0B4J246 113 aa13.16□□□□□ -0.3
RAB4A-201ENST00000366690 GAGE6Q13070 117 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms