RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 BAGE2Q86Y30 109 aa3.26□□□□□ -1.89
RNU4-4P-201ENST00000364588 VAX2Q9UIW0 290 aa3.26□□□□□ -1.89
RNU4-4P-201ENST00000364588 KIF25-AS1Q9Y6Z4 181 aa3.26□□□□□ -1.89
RNU4-4P-201ENST00000364588 IGLV4-60A0A075B6I1 120 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 IGHV3-64A0A075B6Q5 118 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 IGHV1-24A0A0C4DH33 117 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 ARPC5O15511 151 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 CXCL1P09341 107 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 OR5AL1P0C617 328 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 GZMBP10144 247 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 CIRBPQ14011 172 aaKnown RBP3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 IQCJQ1A5X6 159 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 Q6ZRU5 148 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 TMUB2Q71RG4 321 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 C20orf203Q8NBC4 194 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 FAM213BQ8TBF2 198 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 SFT2D1Q8WV19 159 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 AP1S3Q96PC3 154 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 TPPP3Q9BW30 176 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 CYTL1Q9NRR1 136 aa3.25□□□□□ -1.89
RNU4-4P-201ENST00000364588 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 IGKV3OR2-268A0A0C4DH90 116 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 G3V3Q6 166 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 SMLR1H3BR10 107 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 M0QY20 66 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 PHOX2AO14813 284 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 PFDN1O60925 122 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 S100A9P06702 114 aaKnown RBP3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 KRTAP1-4P0C5Y4 121 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 NKX2-5P52952 324 aaPredicted RBP3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 CNBPP62633 177 aaKnown RBP3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 SPACA4Q8TDM5 124 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 C11orf52Q96A22 123 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 TMEM243Q9BU79 118 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 DPH3P1Q9H4G8 78 aa3.24□□□□□ -1.89
RNU4-4P-201ENST00000364588 TRAV8-4A0A0B4J246 113 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 IGKV2-24A0A0C4DH68 120 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 H7C1H1 209 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 P01737 135 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 RPL35P42766 123 aaKnown RBP3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 SULT1A2P50226 295 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 NDUFV3P56181 108 aaKnown RBP3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 COX6A2Q02221 97 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 MAJINQ3KP22 176 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 KCNRGQ8N5I3 272 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 FER1L6-AS1Q8NA97 138 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 OR2D3Q8NGH3 330 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 C7orf33Q8WU49 177 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 GTSF1Q8WW33 167 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 MBD3L1Q8WWY6 194 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 RNF185Q96GF1 192 aa3.23□□□□□ -1.89
RNU4-4P-201ENST00000364588 UBE2L6O14933 153 aa3.22□□□□□ -1.89
RNU4-4P-201ENST00000364588 IGLC6P0CF74 106 aa3.22□□□□□ -1.89
RNU4-4P-201ENST00000364588 CENPWQ5EE01 88 aa3.22□□□□□ -1.89
RNU4-4P-201ENST00000364588 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
RNU4-4P-201ENST00000364588 RASL11AQ6T310 242 aa3.22□□□□□ -1.89
RNU4-4P-201ENST00000364588 C15orf56Q8N910 161 aa3.22□□□□□ -1.89
RNU4-4P-201ENST00000364588 LYPD6BQ8NI32 183 aa3.22□□□□□ -1.89
RNU4-4P-201ENST00000364588 PLAC8Q9NZF1 115 aa3.22□□□□□ -1.89
RNU4-4P-201ENST00000364588 GNG13Q9P2W3 67 aa3.22□□□□□ -1.89
RNU4-4P-201ENST00000364588 RAB19A4D1S5 217 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 UMAD1C9J7I0 102 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 TRGC1P0CF51 173 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 NTF3P20783 257 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 RPS10P46783 165 aaKnown RBP3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 KRTAP12-2P59991 146 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 RPS20P60866 119 aaKnown RBP3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 CACNG7P62955 275 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 CCL20P78556 96 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 PRR3P79522 188 aaKnown RBP3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 LRP2P98164 4655 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 COTL1Q14019 142 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 LYZL1Q6UWQ5 148 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 PGLYRP4Q96LB8 373 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 LINC01600Q96MT4 127 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 NIT2Q9NQR4 276 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 TNXBP22105 4242 aa3.21□□□□□ -1.9
RNU4-4P-201ENST00000364588 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 A0A096LNI7 61 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 TRAV26-2A0A0B4J265 109 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 KANTRA0A1W2PQU2 76 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 IGKV2-29A2NJV5 120 aaPredicted RBP3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 C19orf71A6NCJ1 209 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 NDUFS6O75380 124 aaKnown RBP3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 IFNA1P01562 189 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 GNG4P50150 75 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 ZNF345Q14585 488 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 AMMECR1LQ6DCA0 310 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 RNASEKQ6P5S7 137 aaKnown RBP3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 CHCHD10Q8WYQ3 142 aaPredicted RBP3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 LINC00526Q96FQ7 95 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 MANBALQ9NQG1 85 aa3.2□□□□□ -1.9
RNU4-4P-201ENST00000364588 TRBV20OR9-2A0A075B6H5 130 aa3.19□□□□□ -1.9
RNU4-4P-201ENST00000364588 GVQW2A0A096LPI5 108 aaPredicted RBP3.19□□□□□ -1.9
RNU4-4P-201ENST00000364588 A0A0J9YXV3 536 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms