RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 CCDC179H3BU77 68 aa13.19□□□□□ -0.3
CACNA1A-201ENST00000360228 IGKV2-28A0A075B6P5 120 aa13.18□□□□□ -0.3
CACNA1A-201ENST00000360228 IGKV2D-28P01615 120 aa13.18□□□□□ -0.3
CACNA1A-201ENST00000360228 SETD2Q9BYW2 2564 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-201ENST00000360228 CTSZQ9UBR2 303 aa13.17□□□□□ -0.3
CACNA1A-201ENST00000360228 Q6Q795 121 aa13.17□□□□□ -0.3
CACNA1A-201ENST00000360228 CHCHD10Q8WYQ3 142 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-201ENST00000360228 TMEM223A0PJW6 202 aa13.17□□□□□ -0.3
CACNA1A-201ENST00000360228 GRNP28799 593 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-201ENST00000360228 IGLV9-49A0A0B4J1Y8 123 aa13.16□□□□□ -0.3
CACNA1A-201ENST00000360228 C1orf147Q96MC9 270 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-201ENST00000360228 CLUHP3Q96NS8 147 aa13.15□□□□□ -0.3
CACNA1A-201ENST00000360228 LINC00467Q9BRT7 94 aa13.15□□□□□ -0.3
CACNA1A-201ENST00000360228 TRAV7A0A075B6U4 112 aa13.15□□□□□ -0.3
CACNA1A-201ENST00000360228 TRBV10-1A0A0K0K1A3 114 aa13.15□□□□□ -0.3
CACNA1A-201ENST00000360228 SPRNQ5BIV9 151 aa13.15□□□□□ -0.3
CACNA1A-201ENST00000360228 PLA2G2AP14555 144 aa13.15□□□□□ -0.3
CACNA1A-201ENST00000360228 PPDPFQ9H3Y8 114 aa13.15□□□□□ -0.3
CACNA1A-201ENST00000360228 TRBV7-6A0A0J9YX20 115 aa13.14□□□□□ -0.31
CACNA1A-201ENST00000360228 ZFP36P26651 326 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-201ENST00000360228 NRACQ8N912 160 aa13.14□□□□□ -0.31
CACNA1A-201ENST00000360228 C22orf34Q6ZV56 151 aa13.13□□□□□ -0.31
CACNA1A-201ENST00000360228 TRBV30A0A0K0K1B3 111 aa13.12□□□□□ -0.31
CACNA1A-201ENST00000360228 XAGE1AQ9HD64 81 aa13.12□□□□□ -0.31
CACNA1A-201ENST00000360228 PROK2Q9HC23 129 aa13.12□□□□□ -0.31
CACNA1A-201ENST00000360228 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-201ENST00000360228 C20orf203Q8NBC4 194 aa13.12□□□□□ -0.31
CACNA1A-201ENST00000360228 ZNF524Q96C55 264 aa13.12□□□□□ -0.31
CACNA1A-201ENST00000360228 TRIAP1O43715 76 aa13.12□□□□□ -0.31
CACNA1A-201ENST00000360228 FAM215AQ9Y5M1 114 aa13.12□□□□□ -0.31
CACNA1A-201ENST00000360228 POM121L12Q8N7R1 296 aa13.12□□□□□ -0.31
CACNA1A-201ENST00000360228 ZNF706Q9Y5V0 76 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-201ENST00000360228 FAM167A-AS1Q96KT0 104 aa13.11□□□□□ -0.31
CACNA1A-201ENST00000360228 IGF1P05019 195 aa13.11□□□□□ -0.31
CACNA1A-201ENST00000360228 EBI3Q14213 229 aa13.11□□□□□ -0.31
CACNA1A-201ENST00000360228 LY6G6EA0A0G2JKS1 128 aa13.11□□□□□ -0.31
CACNA1A-201ENST00000360228 NRGNQ92686 78 aa13.11□□□□□ -0.31
CACNA1A-201ENST00000360228 PSPHP1O15172 72 aa13.1□□□□□ -0.31
CACNA1A-201ENST00000360228 TP53TG3Q9ULZ0 132 aa13.1□□□□□ -0.31
CACNA1A-201ENST00000360228 PKD1L2Q7Z442 2459 aa13.1□□□□□ -0.31
CACNA1A-201ENST00000360228 HILS1P60008 231 aa13.1□□□□□ -0.31
CACNA1A-201ENST00000360228 MAP6D1Q9H9H5 199 aa13.1□□□□□ -0.31
CACNA1A-201ENST00000360228 TRBV6-5A0A0K0K1A5 114 aa13.1□□□□□ -0.31
CACNA1A-201ENST00000360228 RNF185Q96GF1 192 aa13.1□□□□□ -0.31
CACNA1A-201ENST00000360228 DEFB131BA0A096LNP1 70 aa13.09□□□□□ -0.31
CACNA1A-201ENST00000360228 K7EMT4 169 aa13.09□□□□□ -0.31
CACNA1A-201ENST00000360228 Q8N976 141 aa13.09□□□□□ -0.31
CACNA1A-201ENST00000360228 ZFHX2Q9C0A1 2572 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-201ENST00000360228 THSD7BQ9C0I4 1608 aa13.09□□□□□ -0.31
CACNA1A-201ENST00000360228 H7C423 109 aa13.09□□□□□ -0.31
CACNA1A-201ENST00000360228 INSL3P51460 131 aa13.09□□□□□ -0.31
CACNA1A-201ENST00000360228 SOSTDC1Q6X4U4 206 aa13.08□□□□□ -0.32
CACNA1A-201ENST00000360228 UNQ9165/PRO28630Q6UXU0 137 aa13.08□□□□□ -0.32
CACNA1A-201ENST00000360228 MYCNOSP40205 109 aa13.07□□□□□ -0.32
CACNA1A-201ENST00000360228 PATE2Q6UY27 113 aa13.07□□□□□ -0.32
CACNA1A-201ENST00000360228 LY6LH3BQJ8 138 aa13.06□□□□□ -0.32
CACNA1A-201ENST00000360228 RSPO1Q2MKA7 263 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-201ENST00000360228 Q6ZTI0 123 aa13.06□□□□□ -0.32
CACNA1A-201ENST00000360228 A0A0J9YX75 114 aa13.06□□□□□ -0.32
CACNA1A-201ENST00000360228 IBA57-AS1B1ANH7 110 aa13.06□□□□□ -0.32
CACNA1A-201ENST00000360228 LINC00308Q8TCZ7 52 aa13.06□□□□□ -0.32
CACNA1A-201ENST00000360228 C11orf53Q8IXP5 236 aa13.06□□□□□ -0.32
CACNA1A-201ENST00000360228 RPL37AP8A6NKH3 93 aa13.05□□□□□ -0.32
CACNA1A-201ENST00000360228 PRO0628Q9UI54 55 aa13.05□□□□□ -0.32
CACNA1A-201ENST00000360228 SPAG11AQ6PDA7 123 aa13.05□□□□□ -0.32
CACNA1A-201ENST00000360228 C6orf99Q4VX62 202 aa13.05□□□□□ -0.32
CACNA1A-201ENST00000360228 DHRS4-AS1Q9P1J3 65 aa13.05□□□□□ -0.32
CACNA1A-201ENST00000360228 CDKN2A-AS1Q9UH64 79 aa13.04□□□□□ -0.32
CACNA1A-201ENST00000360228 ESRGQ1W209 222 aa13.04□□□□□ -0.32
CACNA1A-201ENST00000360228 C10orf25Q5T742 122 aa13.04□□□□□ -0.32
CACNA1A-201ENST00000360228 CFAP126Q5VTH2 177 aa13.03□□□□□ -0.32
CACNA1A-201ENST00000360228 CELA1Q9UNI1 258 aa13.03□□□□□ -0.32
CACNA1A-201ENST00000360228 MRPS12O15235 138 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-201ENST00000360228 CXCL6P80162 114 aa13.02□□□□□ -0.33
CACNA1A-201ENST00000360228 RBX1P62877 108 aa13.02□□□□□ -0.33
CACNA1A-201ENST00000360228 DNAJC9-AS1A6NH13 148 aa13.01□□□□□ -0.33
CACNA1A-201ENST00000360228 IGLV3-1P01715 115 aa13.01□□□□□ -0.33
CACNA1A-201ENST00000360228 LIMD2Q9BT23 127 aa13.01□□□□□ -0.33
CACNA1A-201ENST00000360228 IGLV2-18A0A075B6J9 118 aa13.01□□□□□ -0.33
CACNA1A-201ENST00000360228 M0R2N4 97 aa13.01□□□□□ -0.33
CACNA1A-201ENST00000360228 NEXN-AS1Q8NBZ9 246 aa13□□□□□ -0.33
CACNA1A-201ENST00000360228 E7EUB6 86 aa13□□□□□ -0.33
CACNA1A-201ENST00000360228 RETNLBQ9BQ08 111 aa13□□□□□ -0.33
CACNA1A-201ENST00000360228 MUC7Q8TAX7 377 aa12.99□□□□□ -0.33
CACNA1A-201ENST00000360228 CIRBP-AS1Q8TBR5 109 aa12.99□□□□□ -0.33
CACNA1A-201ENST00000360228 FRMD6-AS1P0C7T7 363 aa12.99□□□□□ -0.33
CACNA1A-201ENST00000360228 Q6JHZ5 121 aa12.98□□□□□ -0.33
CACNA1A-201ENST00000360228 ABCA12Q86UK0 2595 aa12.98□□□□□ -0.33
CACNA1A-201ENST00000360228 A6NDX4 124 aa12.98□□□□□ -0.33
CACNA1A-201ENST00000360228 TP73-AS1Q9UF72 201 aa12.98□□□□□ -0.33
CACNA1A-201ENST00000360228 TRBV6-8A0A0A6YYG3 113 aa12.98□□□□□ -0.33
CACNA1A-201ENST00000360228 ODF3L1Q8IXM7 274 aa12.98□□□□□ -0.33
CACNA1A-201ENST00000360228 USP9XQ93008 2570 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-201ENST00000360228 SYCNQ0VAF6 134 aa12.97□□□□□ -0.33
CACNA1A-201ENST00000360228 A8MZ25 164 aa12.97□□□□□ -0.33
CACNA1A-201ENST00000360228 IGLV4-3A0A075B6K6 122 aa12.97□□□□□ -0.33
CACNA1A-201ENST00000360228 PLA2G1BP04054 148 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-201ENST00000360228 ANKRD17O75179 2603 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-201ENST00000360228 MTORP42345 2549 aa12.97□□□□□ -0.33
CACNA1A-201ENST00000360228 A0A1B0GXF2 115 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms