RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 UBE2D2P62837 147 aa10.63□□□□□ -0.71
GABPB1-202ENST00000359031 CEMP1Q6PRD7 247 aaPredicted RBP10.63□□□□□ -0.71
GABPB1-202ENST00000359031 Q6ZUT4 128 aa10.63□□□□□ -0.71
GABPB1-202ENST00000359031 OR5A1Q8NGJ0 315 aa10.63□□□□□ -0.71
GABPB1-202ENST00000359031 TRGV2A0A075B6R0 118 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 TINCRA0A1B0GVN0 87 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 K7EP34 96 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 K7ERJ3 54 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 SMAGPQ0VAQ4 97 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 SLC25A29Q8N8R3 303 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 GAGE12BA1L429 117 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 GAGE10A6NGK3 116 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 GAGE7O76087 117 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 GAGE12FP0CL80 117 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 GAGE12GP0CL81 117 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 GAGE12IP0CL82 117 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 C12orf74Q32Q52 190 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 SAMD5Q5TGI4 173 aa10.62□□□□□ -0.71
GABPB1-202ENST00000359031 MEGF8Q7Z7M0 2845 aa10.61□□□□□ -0.71
GABPB1-202ENST00000359031 TRBV6-4A0A1B0GX49 114 aa10.61□□□□□ -0.71
GABPB1-202ENST00000359031 FABP2P12104 132 aa10.61□□□□□ -0.71
GABPB1-202ENST00000359031 SRSF9Q13242 221 aaKnown RBP eCLIP10.6□□□□□ -0.71
GABPB1-202ENST00000359031 CITED1Q99966 193 aa10.6□□□□□ -0.71
GABPB1-202ENST00000359031 NAA38Q9BRA0 125 aaKnown RBP10.6□□□□□ -0.71
GABPB1-202ENST00000359031 GAGE12JA6NER3 117 aa10.59□□□□□ -0.71
GABPB1-202ENST00000359031 GAGE4Q13068 117 aa10.59□□□□□ -0.71
GABPB1-202ENST00000359031 GAGE5Q13069 117 aa10.59□□□□□ -0.71
GABPB1-202ENST00000359031 GAGE13Q4V321 117 aa10.59□□□□□ -0.71
GABPB1-202ENST00000359031 RNASE13Q5GAN3 156 aaKnown RBP10.59□□□□□ -0.71
GABPB1-202ENST00000359031 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
GABPB1-202ENST00000359031 GTSF1LQ9H1H1 148 aa10.59□□□□□ -0.71
GABPB1-202ENST00000359031 CSDC2Q9Y534 153 aaKnown RBP10.59□□□□□ -0.71
GABPB1-202ENST00000359031 UBE2D1P51668 147 aa10.58□□□□□ -0.72
GABPB1-202ENST00000359031 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
GABPB1-202ENST00000359031 SPCS1Q9Y6A9 102 aa10.58□□□□□ -0.72
GABPB1-202ENST00000359031 TRGV4A0A0C4DH28 118 aa10.58□□□□□ -0.72
GABPB1-202ENST00000359031 IGHV1-58A0A0C4DH39 117 aa10.58□□□□□ -0.72
GABPB1-202ENST00000359031 SMIM9A6NGZ8 99 aa10.58□□□□□ -0.72
GABPB1-202ENST00000359031 IGLL5B9A064 214 aa10.58□□□□□ -0.72
GABPB1-202ENST00000359031 TIRAPP58753 221 aa10.58□□□□□ -0.72
GABPB1-202ENST00000359031 KIR2DL5BQ8NHK3 375 aa10.58□□□□□ -0.72
GABPB1-202ENST00000359031 IGLV5-45A0A087WSX0 123 aa10.57□□□□□ -0.72
GABPB1-202ENST00000359031 IGHV3-30-3P0DP02 117 aa10.57□□□□□ -0.72
GABPB1-202ENST00000359031 NTM-AS1Q6ZSK4 140 aa10.57□□□□□ -0.72
GABPB1-202ENST00000359031 LINC00612Q8N6U2 182 aa10.57□□□□□ -0.72
GABPB1-202ENST00000359031 GEMIN7Q9H840 131 aaKnown RBP10.57□□□□□ -0.72
GABPB1-202ENST00000359031 IGHV3-64A0A075B6Q5 118 aa10.56□□□□□ -0.72
GABPB1-202ENST00000359031 FAM19A3Q7Z5A8 133 aa10.56□□□□□ -0.72
GABPB1-202ENST00000359031 H7C423 109 aa10.55□□□□□ -0.72
GABPB1-202ENST00000359031 IGHV3-30P01768 117 aa10.55□□□□□ -0.72
GABPB1-202ENST00000359031 IGHV3-30-5P0DP03 117 aa10.55□□□□□ -0.72
GABPB1-202ENST00000359031 FHL2Q14192 279 aa10.55□□□□□ -0.72
GABPB1-202ENST00000359031 TMEM243Q9BU79 118 aa10.55□□□□□ -0.72
GABPB1-202ENST00000359031 TENM1Q9UKZ4 2725 aa10.55□□□□□ -0.72
GABPB1-202ENST00000359031 TMEM238C9JI98 176 aa10.55□□□□□ -0.72
GABPB1-202ENST00000359031 LINC00694P0DN24 101 aa10.55□□□□□ -0.72
GABPB1-202ENST00000359031 VSIG2Q96IQ7 327 aa10.55□□□□□ -0.72
GABPB1-202ENST00000359031 UBE2L6O14933 153 aa10.54□□□□□ -0.72
GABPB1-202ENST00000359031 HERVK_113P63121 156 aa10.54□□□□□ -0.72
GABPB1-202ENST00000359031 X6R8D5 127 aa10.54□□□□□ -0.72
GABPB1-202ENST00000359031 MGAM2Q2M2H8 2515 aa10.53□□□□□ -0.72
GABPB1-202ENST00000359031 TRAV8-3A0A0A6YYJ7 113 aa10.53□□□□□ -0.72
GABPB1-202ENST00000359031 C10orf126Q8N4M7 172 aa10.53□□□□□ -0.72
GABPB1-202ENST00000359031 A0A0J9YXY3 114 aa10.52□□□□□ -0.73
GABPB1-202ENST00000359031 LOC100131303A0A0U1RQF7 123 aa10.52□□□□□ -0.73
GABPB1-202ENST00000359031 SPINK8P0C7L1 97 aa10.52□□□□□ -0.73
GABPB1-202ENST00000359031 APOC4P55056 127 aa10.52□□□□□ -0.73
GABPB1-202ENST00000359031 SHISA2Q6UWI4 295 aa10.52□□□□□ -0.73
GABPB1-202ENST00000359031 TMEM101Q96IK0 257 aa10.52□□□□□ -0.73
GABPB1-202ENST00000359031 ZFAND6Q6FIF0 208 aa10.51□□□□□ -0.73
GABPB1-202ENST00000359031 CDC42SE2Q9NRR3 84 aa10.51□□□□□ -0.73
GABPB1-202ENST00000359031 CDKN2A-AS1Q9UH64 79 aa10.51□□□□□ -0.73
GABPB1-202ENST00000359031 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
GABPB1-202ENST00000359031 LYRM9A8MSI8 78 aa10.5□□□□□ -0.73
GABPB1-202ENST00000359031 RPL24P83731 157 aaKnown RBP10.5□□□□□ -0.73
GABPB1-202ENST00000359031 LINC00242Q5T6M2 205 aa10.5□□□□□ -0.73
GABPB1-202ENST00000359031 WFDC9Q8NEX5 89 aa10.5□□□□□ -0.73
GABPB1-202ENST00000359031 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
GABPB1-202ENST00000359031 DEFB130BP0DP73 79 aa10.49□□□□□ -0.73
GABPB1-202ENST00000359031 DEFB130AP0DP74 79 aa10.49□□□□□ -0.73
GABPB1-202ENST00000359031 APOMO95445 188 aa10.48□□□□□ -0.73
GABPB1-202ENST00000359031 SPANXDQ9BXN6 97 aa10.48□□□□□ -0.73
GABPB1-202ENST00000359031 SPANXCQ9NY87 97 aa10.48□□□□□ -0.73
GABPB1-202ENST00000359031 TRBV6-8A0A0A6YYG3 113 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 NDUFA1O15239 70 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 TIMM17BO60830 172 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 TSPAN13O95857 204 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 COX6A2Q02221 97 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 LYRM7Q5U5X0 104 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 LITAFQ99732 161 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 A0A0B4J2C4 111 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 CFC1BP0CG36 223 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 CFC1P0CG37 223 aa10.47□□□□□ -0.73
GABPB1-202ENST00000359031 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.46□□□□□ -0.74
GABPB1-202ENST00000359031 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.74
GABPB1-202ENST00000359031 DEFB135Q30KP9 77 aa10.46□□□□□ -0.74
GABPB1-202ENST00000359031 A4D1N5 150 aa10.45□□□□□ -0.74
GABPB1-202ENST00000359031 SMIM1B2RUZ4 78 aa10.45□□□□□ -0.74
GABPB1-202ENST00000359031 OCIAD2Q56VL3 154 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms