RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 PTPRDP23468 1912 aa6.59□□□□□ -1.35
CTNND1-201ENST00000358694 PLA2G2AP14555 144 aa6.59□□□□□ -1.36
CTNND1-201ENST00000358694 ARID2Q68CP9 1835 aa6.58□□□□□ -1.36
CTNND1-201ENST00000358694 RIF1Q5UIP0 2472 aaKnown RBP6.58□□□□□ -1.36
CTNND1-201ENST00000358694 MALRD1Q5VYJ5 2156 aa6.58□□□□□ -1.36
CTNND1-201ENST00000358694 IGLV2-14P01704 120 aa6.58□□□□□ -1.36
CTNND1-201ENST00000358694 KIAA1671Q9BY89 1806 aa6.58□□□□□ -1.36
CTNND1-201ENST00000358694 NCKAP5O14513 1909 aa6.58□□□□□ -1.36
CTNND1-201ENST00000358694 LINC00208Q96KT6 92 aa6.58□□□□□ -1.36
CTNND1-201ENST00000358694 C1orf137Q5JT78 98 aa6.57□□□□□ -1.36
CTNND1-201ENST00000358694 C1orf195Q5TG92 126 aa6.57□□□□□ -1.36
CTNND1-201ENST00000358694 SIPA1L1O43166 1804 aa6.57□□□□□ -1.36
CTNND1-201ENST00000358694 LINC00959A0A1B0GUT2 108 aa6.57□□□□□ -1.36
CTNND1-201ENST00000358694 ZGRF1Q86YA3 2104 aa6.57□□□□□ -1.36
CTNND1-201ENST00000358694 FBXL19-AS1Q494R0 122 aa6.57□□□□□ -1.36
CTNND1-201ENST00000358694 LINC01556Q5JQF7 62 aa6.57□□□□□ -1.36
CTNND1-201ENST00000358694 CREBBPQ92793 2442 aa6.57□□□□□ -1.36
CTNND1-201ENST00000358694 A8MZ25 164 aa6.57□□□□□ -1.36
CTNND1-201ENST00000358694 Q6Q795 121 aa6.57□□□□□ -1.36
CTNND1-201ENST00000358694 M0QY20 66 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 EBI3Q14213 229 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 OXLD1Q5BKU9 147 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 TICRRQ7Z2Z1 1910 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 REG3GQ6UW15 175 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 TRBV30A0A0K0K1B3 111 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 FRMD6-AS1P0C7T7 363 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 KRTAP27-1Q3LI81 207 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 PCOTHQ58A44 107 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 GDF5OSQ5U4N7 250 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 C10orf99Q6UWK7 81 aa6.56□□□□□ -1.36
CTNND1-201ENST00000358694 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-201ENST00000358694 NBASA2RRP1 2371 aa6.55□□□□□ -1.36
CTNND1-201ENST00000358694 PMAIP1Q13794 54 aa6.55□□□□□ -1.36
CTNND1-201ENST00000358694 SMIM11BQ8TCY0 68 aa6.55□□□□□ -1.36
CTNND1-201ENST00000358694 MRPS12O15235 138 aaKnown RBP6.55□□□□□ -1.36
CTNND1-201ENST00000358694 CACNA1HO95180 2353 aa6.55□□□□□ -1.36
CTNND1-201ENST00000358694 COX17Q14061 63 aa6.54□□□□□ -1.36
CTNND1-201ENST00000358694 LINC01006Q8NI28 216 aa6.54□□□□□ -1.36
CTNND1-201ENST00000358694 Q8NA96 180 aa6.54□□□□□ -1.36
CTNND1-201ENST00000358694 C6orf223Q8N319 242 aa6.54□□□□□ -1.36
CTNND1-201ENST00000358694 LCTP09848 1927 aa6.54□□□□□ -1.36
CTNND1-201ENST00000358694 CSDC2Q9Y534 153 aaKnown RBP6.54□□□□□ -1.36
CTNND1-201ENST00000358694 CYSRT1A8MQ03 144 aa6.53□□□□□ -1.36
CTNND1-201ENST00000358694 NDUFA7O95182 113 aa6.53□□□□□ -1.36
CTNND1-201ENST00000358694 PYGO1Q9Y3Y4 419 aa6.53□□□□□ -1.36
CTNND1-201ENST00000358694 HIVEP2P31629 2446 aa6.53□□□□□ -1.36
CTNND1-201ENST00000358694 C1orf134Q5TEV5 83 aa6.53□□□□□ -1.36
CTNND1-201ENST00000358694 MRGPRG-AS1Q2M3A8 158 aa6.53□□□□□ -1.36
CTNND1-201ENST00000358694 TNRC6AQ8NDV7 1962 aaKnown RBP6.53□□□□□ -1.36
CTNND1-201ENST00000358694 LINC01547P58512 204 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-201ENST00000358694 WDR81Q562E7 1941 aa6.52□□□□□ -1.37
CTNND1-201ENST00000358694 BEAN1Q3B7T3 259 aa6.52□□□□□ -1.37
CTNND1-201ENST00000358694 ZNF702PQ9H963 129 aa6.52□□□□□ -1.37
CTNND1-201ENST00000358694 LTBP1Q14766 1721 aa6.51□□□□□ -1.37
CTNND1-201ENST00000358694 C2orf48Q96LS8 159 aa6.51□□□□□ -1.37
CTNND1-201ENST00000358694 PSMG3-AS1Q96PY0 264 aa6.51□□□□□ -1.37
CTNND1-201ENST00000358694 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
CTNND1-201ENST00000358694 Q9BRP9 147 aa6.51□□□□□ -1.37
CTNND1-201ENST00000358694 C18orf65Q6ZTR6 163 aa6.51□□□□□ -1.37
CTNND1-201ENST00000358694 LIMD2Q9BT23 127 aa6.51□□□□□ -1.37
CTNND1-201ENST00000358694 MSMPQ1L6U9 139 aa6.51□□□□□ -1.37
CTNND1-201ENST00000358694 MAPKAPK5-AS1Q8N8E1 139 aa6.51□□□□□ -1.37
CTNND1-201ENST00000358694 PRLHP81277 87 aa6.5□□□□□ -1.37
CTNND1-201ENST00000358694 TSHBP01222 138 aa6.5□□□□□ -1.37
CTNND1-201ENST00000358694 Q8IZM0 81 aa6.5□□□□□ -1.37
CTNND1-201ENST00000358694 SBF1O95248 1867 aa6.5□□□□□ -1.37
CTNND1-201ENST00000358694 Q6JHZ5 121 aa6.5□□□□□ -1.37
CTNND1-201ENST00000358694 SBSPONQ8IVN8 264 aa6.5□□□□□ -1.37
CTNND1-201ENST00000358694 U3KQK5 164 aa6.5□□□□□ -1.37
CTNND1-201ENST00000358694 MED13Q9UHV7 2174 aa6.5□□□□□ -1.37
CTNND1-201ENST00000358694 RNF185Q96GF1 192 aa6.49□□□□□ -1.37
CTNND1-201ENST00000358694 DSCAML1Q8TD84 2053 aa6.49□□□□□ -1.37
CTNND1-201ENST00000358694 NTM-AS1Q6ZSK4 140 aa6.49□□□□□ -1.37
CTNND1-201ENST00000358694 MYLKQ15746 1914 aa6.49□□□□□ -1.37
CTNND1-201ENST00000358694 BRI3O95415 125 aa6.49□□□□□ -1.37
CTNND1-201ENST00000358694 PRM2P04554 102 aa6.49□□□□□ -1.37
CTNND1-201ENST00000358694 COX7CP15954 63 aa6.49□□□□□ -1.37
CTNND1-201ENST00000358694 UNQ6190/PRO20217Q6UXQ8 127 aa6.49□□□□□ -1.37
CTNND1-201ENST00000358694 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
CTNND1-201ENST00000358694 SMIM26A0A096LP01 95 aa6.48□□□□□ -1.37
CTNND1-201ENST00000358694 WISP2O76076 250 aa6.48□□□□□ -1.37
CTNND1-201ENST00000358694 IGKV2-30P06310 120 aa6.48□□□□□ -1.37
CTNND1-201ENST00000358694 EGFEM1PQ0D2K5 195 aa6.48□□□□□ -1.37
CTNND1-201ENST00000358694 TSC2P49815 1807 aa6.48□□□□□ -1.37
CTNND1-201ENST00000358694 MUC7Q8TAX7 377 aa6.48□□□□□ -1.37
CTNND1-201ENST00000358694 IMUPQ9GZP8 106 aa6.48□□□□□ -1.37
CTNND1-201ENST00000358694 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
CTNND1-201ENST00000358694 H0Y9P7 68 aa6.47□□□□□ -1.37
CTNND1-201ENST00000358694 DEFB116Q30KQ4 102 aa6.47□□□□□ -1.37
CTNND1-201ENST00000358694 TRBV10-3A0A0K0K1G6 114 aa6.47□□□□□ -1.37
CTNND1-201ENST00000358694 PSPHP1O15172 72 aa6.47□□□□□ -1.37
CTNND1-201ENST00000358694 CRYGAP11844 174 aa6.47□□□□□ -1.37
CTNND1-201ENST00000358694 GPR179Q6PRD1 2367 aa6.47□□□□□ -1.37
CTNND1-201ENST00000358694 PTPRQQ9UMZ3 2332 aa6.47□□□□□ -1.37
CTNND1-201ENST00000358694 WNK1Q9H4A3 2382 aa6.47□□□□□ -1.37
CTNND1-201ENST00000358694 PLXND1Q9Y4D7 1925 aa6.47□□□□□ -1.37
CTNND1-201ENST00000358694 A0A1W2PNU3 283 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-201ENST00000358694 RNASE3P12724 160 aaKnown RBP6.47□□□□□ -1.37
CTNND1-201ENST00000358694 MRPS36P82909 103 aaKnown RBP6.47□□□□□ -1.37
CTNND1-201ENST00000358694 MBD6Q96DN6 1003 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms