RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 ARL17AQ8IVW1 177 aa11.35□□□□□ -0.59
PHTF1-201ENST00000357783 TINCRA0A1B0GVN0 87 aa11.35□□□□□ -0.59
PHTF1-201ENST00000357783 K7EQD1 137 aa11.35□□□□□ -0.59
PHTF1-201ENST00000357783 SPINK8P0C7L1 97 aa11.35□□□□□ -0.59
PHTF1-201ENST00000357783 CMC4P56277 68 aaPredicted RBP11.35□□□□□ -0.59
PHTF1-201ENST00000357783 C19orf73Q9NVV2 129 aa11.35□□□□□ -0.59
PHTF1-201ENST00000357783 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
PHTF1-201ENST00000357783 DGAT2L7PQ6IED9 249 aa11.34□□□□□ -0.59
PHTF1-201ENST00000357783 HECTD1Q9ULT8 2610 aa11.34□□□□□ -0.59
PHTF1-201ENST00000357783 TRAV4A0A0B4J268 109 aa11.34□□□□□ -0.59
PHTF1-201ENST00000357783 A8MZ25 164 aa11.34□□□□□ -0.59
PHTF1-201ENST00000357783 GCN1Q92616 2671 aaKnown RBP11.33□□□□□ -0.6
PHTF1-201ENST00000357783 IGHV1-58A0A0C4DH39 117 aa11.33□□□□□ -0.6
PHTF1-201ENST00000357783 RPL36AP83881 106 aaKnown RBP11.33□□□□□ -0.6
PHTF1-201ENST00000357783 ETDBQ3ZM63 59 aa11.33□□□□□ -0.6
PHTF1-201ENST00000357783 SH2D6Q7Z4S9 175 aa11.33□□□□□ -0.6
PHTF1-201ENST00000357783 RPL36ALQ969Q0 106 aaKnown RBP11.33□□□□□ -0.6
PHTF1-201ENST00000357783 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
PHTF1-201ENST00000357783 A4D1N5 150 aa11.33□□□□□ -0.6
PHTF1-201ENST00000357783 GAGE13Q4V321 117 aa11.33□□□□□ -0.6
PHTF1-201ENST00000357783 GAGE12JA6NER3 117 aa11.32□□□□□ -0.6
PHTF1-201ENST00000357783 NDUFA7O95182 113 aa11.32□□□□□ -0.6
PHTF1-201ENST00000357783 GAGE4Q13068 117 aa11.32□□□□□ -0.6
PHTF1-201ENST00000357783 GAGE5Q13069 117 aa11.32□□□□□ -0.6
PHTF1-201ENST00000357783 LINC00694P0DN24 101 aa11.32□□□□□ -0.6
PHTF1-201ENST00000357783 MUSTN1Q8IVN3 82 aa11.32□□□□□ -0.6
PHTF1-201ENST00000357783 VSIG2Q96IQ7 327 aa11.32□□□□□ -0.6
PHTF1-201ENST00000357783 PRO0461Q9UI25 63 aa11.32□□□□□ -0.6
PHTF1-201ENST00000357783 TRBV10-1A0A0K0K1A3 114 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 PLAC8L1A1L4L8 177 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 GAGE7O76087 117 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 GAGE12FP0CL80 117 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 GAGE12GP0CL81 117 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 GAGE12IP0CL82 117 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 NDUFA12Q9UI09 145 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 NOTCH2Q04721 2471 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 PSMB2P49721 201 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
PHTF1-201ENST00000357783 SVIPQ8NHG7 77 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 C16orf74Q96GX8 76 aa11.31□□□□□ -0.6
PHTF1-201ENST00000357783 TRGV2A0A075B6R0 118 aa11.3□□□□□ -0.6
PHTF1-201ENST00000357783 FAM110AQ9BQ89 295 aa11.3□□□□□ -0.6
PHTF1-201ENST00000357783 PRO1854Q9UHT4 67 aa11.3□□□□□ -0.6
PHTF1-201ENST00000357783 KRTAP10-3P60369 221 aa11.3□□□□□ -0.6
PHTF1-201ENST00000357783 NTM-AS1Q6ZSK4 140 aa11.3□□□□□ -0.6
PHTF1-201ENST00000357783 CDKN2A-AS1Q9UH64 79 aa11.3□□□□□ -0.6
PHTF1-201ENST00000357783 EIF4EBP3O60516 100 aaPredicted RBP11.29□□□□□ -0.6
PHTF1-201ENST00000357783 UBE2D3P61077 147 aa11.29□□□□□ -0.6
PHTF1-201ENST00000357783 UBE2D2P62837 147 aa11.29□□□□□ -0.6
PHTF1-201ENST00000357783 DAZ4Q86SG3 579 aaKnown RBP11.29□□□□□ -0.6
PHTF1-201ENST00000357783 CSNK1G2-AS1Q8NCQ2 148 aa11.29□□□□□ -0.6
PHTF1-201ENST00000357783 C1QTNF4Q9BXJ3 329 aa11.29□□□□□ -0.6
PHTF1-201ENST00000357783 DAZ3Q9NR90 486 aaKnown RBP11.29□□□□□ -0.6
PHTF1-201ENST00000357783 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.29□□□□□ -0.6
PHTF1-201ENST00000357783 INSL3P51460 131 aa11.28□□□□□ -0.6
PHTF1-201ENST00000357783 LITAFQ99732 161 aa11.28□□□□□ -0.6
PHTF1-201ENST00000357783 FN1P02751 2386 aaKnown RBP11.28□□□□□ -0.6
PHTF1-201ENST00000357783 PF4P02776 101 aa11.28□□□□□ -0.6
PHTF1-201ENST00000357783 COX6A2Q02221 97 aa11.28□□□□□ -0.6
PHTF1-201ENST00000357783 LOC100131303A0A0U1RQF7 123 aa11.27□□□□□ -0.61
PHTF1-201ENST00000357783 H7C2G1 150 aa11.27□□□□□ -0.61
PHTF1-201ENST00000357783 PRSS2P07478 247 aa11.27□□□□□ -0.61
PHTF1-201ENST00000357783 CKS1BP61024 79 aa11.27□□□□□ -0.61
PHTF1-201ENST00000357783 LY6G6DO95868 133 aa11.27□□□□□ -0.61
PHTF1-201ENST00000357783 ADAMTSL4-AS1Q5T5F5 129 aa11.27□□□□□ -0.61
PHTF1-201ENST00000357783 TIRAPP58753 221 aa11.26□□□□□ -0.61
PHTF1-201ENST00000357783 LYRM7Q5U5X0 104 aa11.26□□□□□ -0.61
PHTF1-201ENST00000357783 IGLV5-45A0A087WSX0 123 aa11.25□□□□□ -0.61
PHTF1-201ENST00000357783 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
PHTF1-201ENST00000357783 LINC00242Q5T6M2 205 aa11.25□□□□□ -0.61
PHTF1-201ENST00000357783 ZFAND6Q6FIF0 208 aa11.25□□□□□ -0.61
PHTF1-201ENST00000357783 TCL1BO95988 128 aa11.25□□□□□ -0.61
PHTF1-201ENST00000357783 IGHV3-33P01772 117 aa11.25□□□□□ -0.61
PHTF1-201ENST00000357783 SCGB1C2P0DMR2 95 aa11.25□□□□□ -0.61
PHTF1-201ENST00000357783 NPC2P61916 151 aa11.25□□□□□ -0.61
PHTF1-201ENST00000357783 SBSPONQ8IVN8 264 aa11.25□□□□□ -0.61
PHTF1-201ENST00000357783 TMEM101Q96IK0 257 aa11.25□□□□□ -0.61
PHTF1-201ENST00000357783 A0A0B4J2C4 111 aa11.24□□□□□ -0.61
PHTF1-201ENST00000357783 TRGV4A0A0C4DH28 118 aa11.24□□□□□ -0.61
PHTF1-201ENST00000357783 OVOL2Q9BRP0 275 aa11.24□□□□□ -0.61
PHTF1-201ENST00000357783 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.23□□□□□ -0.61
PHTF1-201ENST00000357783 SMCPP49901 116 aaPredicted RBP11.23□□□□□ -0.61
PHTF1-201ENST00000357783 HERVK_113P63121 156 aa11.23□□□□□ -0.61
PHTF1-201ENST00000357783 ERG28Q9UKR5 140 aa11.23□□□□□ -0.61
PHTF1-201ENST00000357783 LINC00482Q8N8I6 264 aa11.23□□□□□ -0.61
PHTF1-201ENST00000357783 TMEM243Q9BU79 118 aa11.23□□□□□ -0.61
PHTF1-201ENST00000357783 CSDC2Q9Y534 153 aaKnown RBP11.23□□□□□ -0.61
PHTF1-201ENST00000357783 UBE2L6O14933 153 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 SPANXDQ9BXN6 97 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 SPANXCQ9NY87 97 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 VWFP04275 2813 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 FOXI1Q12951 378 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 MIAQ16674 131 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 Q1RN00 199 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 ATP6V0E2Q8NHE4 81 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 CDC42SE2Q9NRR3 84 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 OTOGQ6ZRI0 2925 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 TRBV6-4A0A1B0GX49 114 aa11.22□□□□□ -0.61
PHTF1-201ENST00000357783 DAND5Q8N907 189 aa11.21□□□□□ -0.61
PHTF1-201ENST00000357783 TRBV20-1A0A075B6N2 111 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms