RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 A0A096LNJ9 63 aa11.6□□□□□ -0.55
TRAPPC11-202ENST00000357207 ABCA12Q86UK0 2595 aa11.59□□□□□ -0.55
TRAPPC11-202ENST00000357207 TIMM17BO60830 172 aa11.59□□□□□ -0.55
TRAPPC11-202ENST00000357207 CRYGDP07320 174 aa11.59□□□□□ -0.55
TRAPPC11-202ENST00000357207 C11orf71Q6IPW1 123 aa11.59□□□□□ -0.55
TRAPPC11-202ENST00000357207 CITED2Q99967 270 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC11-202ENST00000357207 LST1O00453 97 aa11.58□□□□□ -0.56
TRAPPC11-202ENST00000357207 CPAMD8Q8IZJ3 1885 aa11.58□□□□□ -0.56
TRAPPC11-202ENST00000357207 CLPSL1A2RUU4 121 aa11.58□□□□□ -0.56
TRAPPC11-202ENST00000357207 DEFB114Q30KQ6 69 aa11.58□□□□□ -0.56
TRAPPC11-202ENST00000357207 C20orf197Q8N268 126 aa11.57□□□□□ -0.56
TRAPPC11-202ENST00000357207 IBA57-AS1B1ANH7 110 aa11.57□□□□□ -0.56
TRAPPC11-202ENST00000357207 RPL18AQ02543 176 aaKnown RBP11.57□□□□□ -0.56
TRAPPC11-202ENST00000357207 IGIPA6NJ69 53 aa11.57□□□□□ -0.56
TRAPPC11-202ENST00000357207 HIGD2BQ4VC39 106 aa11.57□□□□□ -0.56
TRAPPC11-202ENST00000357207 DEFB4AO15263 64 aa11.57□□□□□ -0.56
TRAPPC11-202ENST00000357207 DEFB135Q30KP9 77 aa11.57□□□□□ -0.56
TRAPPC11-202ENST00000357207 AGRNO00468 2067 aa11.56□□□□□ -0.56
TRAPPC11-202ENST00000357207 UBE2D1P51668 147 aa11.56□□□□□ -0.56
TRAPPC11-202ENST00000357207 C3orf22Q8N5N4 141 aa11.56□□□□□ -0.56
TRAPPC11-202ENST00000357207 IMUPQ9GZP8 106 aa11.56□□□□□ -0.56
TRAPPC11-202ENST00000357207 ANKRD11Q6UB99 2663 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC11-202ENST00000357207 C19orf84I3L1E1 186 aa11.55□□□□□ -0.56
TRAPPC11-202ENST00000357207 SLPIP03973 132 aa11.55□□□□□ -0.56
TRAPPC11-202ENST00000357207 C10orf99Q6UWK7 81 aa11.55□□□□□ -0.56
TRAPPC11-202ENST00000357207 C9orf85Q96MD7 179 aa11.55□□□□□ -0.56
TRAPPC11-202ENST00000357207 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
TRAPPC11-202ENST00000357207 FN1P02751 2386 aaKnown RBP11.54□□□□□ -0.56
TRAPPC11-202ENST00000357207 COX8CQ7Z4L0 72 aa11.54□□□□□ -0.56
TRAPPC11-202ENST00000357207 PKD1L2Q7Z442 2459 aa11.54□□□□□ -0.56
TRAPPC11-202ENST00000357207 H7C423 109 aa11.53□□□□□ -0.56
TRAPPC11-202ENST00000357207 COX7BP24311 80 aa11.53□□□□□ -0.56
TRAPPC11-202ENST00000357207 LINC00269Q8N2A0 174 aa11.53□□□□□ -0.56
TRAPPC11-202ENST00000357207 JMJD1CQ15652 2540 aa11.52□□□□□ -0.57
TRAPPC11-202ENST00000357207 J3QKU1 62 aa11.52□□□□□ -0.57
TRAPPC11-202ENST00000357207 MP68P56378 58 aa11.52□□□□□ -0.57
TRAPPC11-202ENST00000357207 ZFYVE26Q68DK2 2539 aa11.52□□□□□ -0.57
TRAPPC11-202ENST00000357207 FAM222AQ5U5X8 452 aa11.51□□□□□ -0.57
TRAPPC11-202ENST00000357207 PSMG3-AS1Q96PY0 264 aa11.51□□□□□ -0.57
TRAPPC11-202ENST00000357207 PRO3102Q9H379 93 aa11.51□□□□□ -0.57
TRAPPC11-202ENST00000357207 MRPS36P82909 103 aaKnown RBP11.51□□□□□ -0.57
TRAPPC11-202ENST00000357207 Q6YL49 198 aa11.51□□□□□ -0.57
TRAPPC11-202ENST00000357207 ATP5EP2Q5VTU8 51 aa11.51□□□□□ -0.57
TRAPPC11-202ENST00000357207 UBE2D4Q9Y2X8 147 aa11.51□□□□□ -0.57
TRAPPC11-202ENST00000357207 CCDC179H3BU77 68 aa11.51□□□□□ -0.57
TRAPPC11-202ENST00000357207 DCANP1Q8TF63 244 aa11.51□□□□□ -0.57
TRAPPC11-202ENST00000357207 POM121L12Q8N7R1 296 aa11.5□□□□□ -0.57
TRAPPC11-202ENST00000357207 TRBV6-8A0A0A6YYG3 113 aa11.5□□□□□ -0.57
TRAPPC11-202ENST00000357207 REG3AQ06141 175 aa11.5□□□□□ -0.57
TRAPPC11-202ENST00000357207 F8W735 103 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC11-202ENST00000357207 TRBV6-4A0A1B0GX49 114 aa11.49□□□□□ -0.57
TRAPPC11-202ENST00000357207 NDUFC2O95298 119 aa11.49□□□□□ -0.57
TRAPPC11-202ENST00000357207 UBE2D3P61077 147 aa11.49□□□□□ -0.57
TRAPPC11-202ENST00000357207 UBE2D2P62837 147 aa11.49□□□□□ -0.57
TRAPPC11-202ENST00000357207 CHCHD10Q8WYQ3 142 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC11-202ENST00000357207 ENHOQ6UWT2 76 aa11.48□□□□□ -0.57
TRAPPC11-202ENST00000357207 DNAJC9-AS1A6NH13 148 aa11.48□□□□□ -0.57
TRAPPC11-202ENST00000357207 NDUFA7O95182 113 aa11.48□□□□□ -0.57
TRAPPC11-202ENST00000357207 CLUHP3Q96NS8 147 aa11.48□□□□□ -0.57
TRAPPC11-202ENST00000357207 PRB2P02812 416 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC11-202ENST00000357207 C6orf99Q4VX62 202 aa11.47□□□□□ -0.57
TRAPPC11-202ENST00000357207 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
TRAPPC11-202ENST00000357207 IGLV4-69A0A075B6H9 119 aa11.47□□□□□ -0.57
TRAPPC11-202ENST00000357207 BPY2O14599 106 aa11.47□□□□□ -0.57
TRAPPC11-202ENST00000357207 IGLV1-40P01703 118 aa11.47□□□□□ -0.57
TRAPPC11-202ENST00000357207 Q6Q795 121 aa11.47□□□□□ -0.57
TRAPPC11-202ENST00000357207 IGLV2-18A0A075B6J9 118 aa11.46□□□□□ -0.57
TRAPPC11-202ENST00000357207 USP17L23D6RBM5 183 aa11.46□□□□□ -0.57
TRAPPC11-202ENST00000357207 PRM2P04554 102 aa11.46□□□□□ -0.57
TRAPPC11-202ENST00000357207 CCL18P55774 89 aa11.46□□□□□ -0.57
TRAPPC11-202ENST00000357207 C5orf47Q569G3 176 aa11.46□□□□□ -0.57
TRAPPC11-202ENST00000357207 TET2Q6N021 2002 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC11-202ENST00000357207 SERP2Q8N6R1 65 aa11.46□□□□□ -0.57
TRAPPC11-202ENST00000357207 WFDC11Q8NEX6 87 aa11.46□□□□□ -0.58
TRAPPC11-202ENST00000357207 NDUFS5O43920 106 aa11.46□□□□□ -0.58
TRAPPC11-202ENST00000357207 CRIP2P52943 208 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC11-202ENST00000357207 COL5A1P20908 1838 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC11-202ENST00000357207 FAM236DA0A1B0GTK5 79 aa11.45□□□□□ -0.58
TRAPPC11-202ENST00000357207 FAM236CP0DP71 79 aa11.45□□□□□ -0.58
TRAPPC11-202ENST00000357207 TSPEAR-AS2P59090 65 aa11.45□□□□□ -0.58
TRAPPC11-202ENST00000357207 FAM110AQ9BQ89 295 aa11.44□□□□□ -0.58
TRAPPC11-202ENST00000357207 FAM240AA0A1B0GVK7 77 aa11.44□□□□□ -0.58
TRAPPC11-202ENST00000357207 EXPH5Q8NEV8 1989 aa11.44□□□□□ -0.58
TRAPPC11-202ENST00000357207 COX7CP15954 63 aa11.44□□□□□ -0.58
TRAPPC11-202ENST00000357207 NDUFB1O75438 58 aa11.43□□□□□ -0.58
TRAPPC11-202ENST00000357207 PRRC2AP48634 2157 aaKnown RBP11.43□□□□□ -0.58
TRAPPC11-202ENST00000357207 SMIM9A6NGZ8 99 aa11.43□□□□□ -0.58
TRAPPC11-202ENST00000357207 SMIM11BQ8TCY0 68 aa11.42□□□□□ -0.58
TRAPPC11-202ENST00000357207 IGHV4-31P0DP07 118 aa11.42□□□□□ -0.58
TRAPPC11-202ENST00000357207 SCXQ7RTU7 201 aa11.42□□□□□ -0.58
TRAPPC11-202ENST00000357207 XAGE1AQ9HD64 81 aa11.41□□□□□ -0.58
TRAPPC11-202ENST00000357207 LYRM9A8MSI8 78 aa11.41□□□□□ -0.58
TRAPPC11-202ENST00000357207 LINC00242Q5T6M2 205 aa11.41□□□□□ -0.58
TRAPPC11-202ENST00000357207 Q6ZSV7 163 aa11.41□□□□□ -0.58
TRAPPC11-202ENST00000357207 PRRC2CQ9Y520 2896 aaKnown RBP11.41□□□□□ -0.58
TRAPPC11-202ENST00000357207 MRGPRG-AS1Q2M3A8 158 aa11.4□□□□□ -0.58
TRAPPC11-202ENST00000357207 BRK1Q8WUW1 75 aa11.4□□□□□ -0.58
TRAPPC11-202ENST00000357207 ADAMTS20P59510 1910 aa11.4□□□□□ -0.58
TRAPPC11-202ENST00000357207 CDC42SE2Q9NRR3 84 aa11.39□□□□□ -0.59
TRAPPC11-202ENST00000357207 CDSNQ15517 529 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms