RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 EBI3Q14213 229 aa11.32□□□□□ -0.6
STRN3-201ENST00000355683 BAALC-AS2P0C853 105 aa11.31□□□□□ -0.6
STRN3-201ENST00000355683 FAM236AA0A1B0GUQ0 79 aa11.31□□□□□ -0.6
STRN3-201ENST00000355683 FAM236BA0A1B0GV22 79 aa11.31□□□□□ -0.6
STRN3-201ENST00000355683 PIFOQ8TCI5 191 aa11.31□□□□□ -0.6
STRN3-201ENST00000355683 IGHV3-30-3P0DP02 117 aa11.3□□□□□ -0.6
STRN3-201ENST00000355683 GATA3P23771 443 aa11.3□□□□□ -0.6
STRN3-201ENST00000355683 XCL1P47992 114 aa11.3□□□□□ -0.6
STRN3-201ENST00000355683 Q9HAA7 133 aa11.3□□□□□ -0.6
STRN3-201ENST00000355683 HRNRQ86YZ3 2850 aaPredicted RBP11.3□□□□□ -0.6
STRN3-201ENST00000355683 HAMPP81172 84 aa11.3□□□□□ -0.6
STRN3-201ENST00000355683 ICOSQ9Y6W8 199 aa11.3□□□□□ -0.6
STRN3-201ENST00000355683 CITED1Q99966 193 aa11.29□□□□□ -0.6
STRN3-201ENST00000355683 CITED2Q99967 270 aaPredicted RBP11.29□□□□□ -0.6
STRN3-201ENST00000355683 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
STRN3-201ENST00000355683 Q6ZTI0 123 aa11.29□□□□□ -0.6
STRN3-201ENST00000355683 CCL24O00175 119 aa11.28□□□□□ -0.6
STRN3-201ENST00000355683 RHODO00212 210 aa11.28□□□□□ -0.6
STRN3-201ENST00000355683 CRIP2P52943 208 aaPredicted RBP11.28□□□□□ -0.6
STRN3-201ENST00000355683 NEXN-AS1Q8NBZ9 246 aa11.28□□□□□ -0.6
STRN3-201ENST00000355683 TRBV6-1A0A0K0K1D8 114 aa11.27□□□□□ -0.6
STRN3-201ENST00000355683 U3KQK5 164 aa11.27□□□□□ -0.6
STRN3-201ENST00000355683 CRLF1O75462 422 aa11.27□□□□□ -0.61
STRN3-201ENST00000355683 ITPR2Q14571 2701 aa11.26□□□□□ -0.61
STRN3-201ENST00000355683 XGP55808 180 aa11.26□□□□□ -0.61
STRN3-201ENST00000355683 C20orf203Q8NBC4 194 aa11.26□□□□□ -0.61
STRN3-201ENST00000355683 TMEM243Q9BU79 118 aa11.26□□□□□ -0.61
STRN3-201ENST00000355683 GPHB5Q86YW7 130 aa11.26□□□□□ -0.61
STRN3-201ENST00000355683 SMR3AQ99954 134 aa11.26□□□□□ -0.61
STRN3-201ENST00000355683 CDKN2A-AS1Q9UH64 79 aa11.26□□□□□ -0.61
STRN3-201ENST00000355683 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
STRN3-201ENST00000355683 ATP5G1P05496 136 aa11.25□□□□□ -0.61
STRN3-201ENST00000355683 TSPEAR-AS2P59090 65 aa11.24□□□□□ -0.61
STRN3-201ENST00000355683 RHOHQ15669 191 aa11.24□□□□□ -0.61
STRN3-201ENST00000355683 DPH3Q96FX2 82 aa11.24□□□□□ -0.61
STRN3-201ENST00000355683 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
STRN3-201ENST00000355683 ELANEP08246 267 aa11.24□□□□□ -0.61
STRN3-201ENST00000355683 LOC100131303A0A0U1RQF7 123 aa11.23□□□□□ -0.61
STRN3-201ENST00000355683 UNC79Q9P2D8 2635 aa11.23□□□□□ -0.61
STRN3-201ENST00000355683 A0A0J9YXY3 114 aa11.23□□□□□ -0.61
STRN3-201ENST00000355683 LGALS9O00182 355 aa11.23□□□□□ -0.61
STRN3-201ENST00000355683 SOCS3O14543 225 aa11.23□□□□□ -0.61
STRN3-201ENST00000355683 K7EQG2 157 aa11.22□□□□□ -0.61
STRN3-201ENST00000355683 M0QY20 66 aa11.22□□□□□ -0.61
STRN3-201ENST00000355683 DCANP1Q8TF63 244 aa11.22□□□□□ -0.61
STRN3-201ENST00000355683 TIMM17AQ99595 171 aa11.22□□□□□ -0.61
STRN3-201ENST00000355683 NFE4Q86UQ8 179 aa11.21□□□□□ -0.61
STRN3-201ENST00000355683 INAFM2P0DMQ5 153 aa11.21□□□□□ -0.61
STRN3-201ENST00000355683 TRAV4A0A0B4J268 109 aa11.21□□□□□ -0.62
STRN3-201ENST00000355683 F5H768 121 aa11.21□□□□□ -0.62
STRN3-201ENST00000355683 HERVK_113P63121 156 aa11.21□□□□□ -0.62
STRN3-201ENST00000355683 SLC25A29Q8N8R3 303 aa11.21□□□□□ -0.62
STRN3-201ENST00000355683 SND1-IT1Q9HBX3 110 aa11.21□□□□□ -0.62
STRN3-201ENST00000355683 ZNF22P17026 224 aaPredicted RBP11.2□□□□□ -0.62
STRN3-201ENST00000355683 PIK3CD-AS1Q5SR53 167 aa11.2□□□□□ -0.62
STRN3-201ENST00000355683 SETXQ7Z333 2677 aaKnown RBP11.2□□□□□ -0.62
STRN3-201ENST00000355683 TRIAP1O43715 76 aa11.2□□□□□ -0.62
STRN3-201ENST00000355683 CRYGDP07320 174 aa11.2□□□□□ -0.62
STRN3-201ENST00000355683 LINC00526Q96FQ7 95 aa11.2□□□□□ -0.62
STRN3-201ENST00000355683 MAP6D1Q9H9H5 199 aa11.2□□□□□ -0.62
STRN3-201ENST00000355683 ANGP03950 147 aaKnown RBP11.19□□□□□ -0.62
STRN3-201ENST00000355683 IGLV4-3A0A075B6K6 122 aa11.19□□□□□ -0.62
STRN3-201ENST00000355683 LINC00482Q8N8I6 264 aa11.19□□□□□ -0.62
STRN3-201ENST00000355683 TRBV10-2A0A0K0K1G8 114 aa11.19□□□□□ -0.62
STRN3-201ENST00000355683 PSMB8P28062 276 aa11.19□□□□□ -0.62
STRN3-201ENST00000355683 LECT2O14960 151 aa11.18□□□□□ -0.62
STRN3-201ENST00000355683 SS18Q15532 418 aa11.18□□□□□ -0.62
STRN3-201ENST00000355683 Q6ZSN1 163 aa11.18□□□□□ -0.62
STRN3-201ENST00000355683 TRBV7-3A0A075B6L6 115 aa11.18□□□□□ -0.62
STRN3-201ENST00000355683 PRB2P02812 416 aaPredicted RBP11.18□□□□□ -0.62
STRN3-201ENST00000355683 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
STRN3-201ENST00000355683 IGHV3-33P01772 117 aa11.18□□□□□ -0.62
STRN3-201ENST00000355683 HERV-K104P63124 156 aa11.18□□□□□ -0.62
STRN3-201ENST00000355683 CFAP126Q5VTH2 177 aa11.17□□□□□ -0.62
STRN3-201ENST00000355683 J3QLI3 93 aa11.17□□□□□ -0.62
STRN3-201ENST00000355683 NDUFV3P56181 108 aaKnown RBP11.17□□□□□ -0.62
STRN3-201ENST00000355683 SVIPQ8NHG7 77 aa11.17□□□□□ -0.62
STRN3-201ENST00000355683 VSIG2Q96IQ7 327 aa11.17□□□□□ -0.62
STRN3-201ENST00000355683 IGHV1-58A0A0C4DH39 117 aa11.17□□□□□ -0.62
STRN3-201ENST00000355683 TMEM126AQ9H061 195 aa11.17□□□□□ -0.62
STRN3-201ENST00000355683 IGLV2-18A0A075B6J9 118 aa11.16□□□□□ -0.62
STRN3-201ENST00000355683 TRAV25A0A0B4J276 109 aa11.16□□□□□ -0.62
STRN3-201ENST00000355683 DEFB135Q30KP9 77 aa11.16□□□□□ -0.62
STRN3-201ENST00000355683 SPATA25Q9BR10 227 aa11.16□□□□□ -0.62
STRN3-201ENST00000355683 C14orf132Q9NPU4 83 aa11.16□□□□□ -0.62
STRN3-201ENST00000355683 A0A1B0GX51 115 aa11.16□□□□□ -0.62
STRN3-201ENST00000355683 IGHV4-31P0DP07 118 aa11.16□□□□□ -0.62
STRN3-201ENST00000355683 SLPIP03973 132 aa11.15□□□□□ -0.62
STRN3-201ENST00000355683 H3BUA1 57 aa11.15□□□□□ -0.62
STRN3-201ENST00000355683 CSMD2Q7Z408 3487 aa11.15□□□□□ -0.62
STRN3-201ENST00000355683 POLR2KP53803 58 aaKnown RBP11.15□□□□□ -0.63
STRN3-201ENST00000355683 SPANXA1Q9NS26 97 aa11.14□□□□□ -0.63
STRN3-201ENST00000355683 DNAJC9-AS1A6NH13 148 aa11.14□□□□□ -0.63
STRN3-201ENST00000355683 K7EMT4 169 aa11.14□□□□□ -0.63
STRN3-201ENST00000355683 TSHBP01222 138 aa11.14□□□□□ -0.63
STRN3-201ENST00000355683 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
STRN3-201ENST00000355683 STAB1Q9NY15 2570 aa11.14□□□□□ -0.63
STRN3-201ENST00000355683 CCDC179H3BU77 68 aa11.13□□□□□ -0.63
STRN3-201ENST00000355683 IGHV3-30P01768 117 aa11.13□□□□□ -0.63
STRN3-201ENST00000355683 IGHV3-30-5P0DP03 117 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms