RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 TMEM86BQ8N661 226 aa13.11□□□□□ -0.31
SPNS3-201ENST00000355530 TRGV1A0A0A0MS02 117 aa13.1□□□□□ -0.31
SPNS3-201ENST00000355530 IGLV5-39A0A0G2JS06 123 aa13.1□□□□□ -0.31
SPNS3-201ENST00000355530 KRTAP10-9P60411 292 aa13.1□□□□□ -0.31
SPNS3-201ENST00000355530 FAM19A3Q7Z5A8 133 aa13.1□□□□□ -0.31
SPNS3-201ENST00000355530 C1orf158Q8N1D5 194 aa13.1□□□□□ -0.31
SPNS3-201ENST00000355530 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.1□□□□□ -0.31
SPNS3-201ENST00000355530 TRBV10-1A0A0K0K1A3 114 aa13.1□□□□□ -0.31
SPNS3-201ENST00000355530 H3BT86 120 aa13.09□□□□□ -0.31
SPNS3-201ENST00000355530 Q96MF0 132 aa13.09□□□□□ -0.31
SPNS3-201ENST00000355530 CSDC2Q9Y534 153 aaKnown RBP13.09□□□□□ -0.31
SPNS3-201ENST00000355530 K7EQD1 137 aa13.09□□□□□ -0.31
SPNS3-201ENST00000355530 RPL36AP83881 106 aaKnown RBP13.09□□□□□ -0.31
SPNS3-201ENST00000355530 LINC00242Q5T6M2 205 aa13.09□□□□□ -0.31
SPNS3-201ENST00000355530 RPL36ALQ969Q0 106 aaKnown RBP13.09□□□□□ -0.31
SPNS3-201ENST00000355530 UBE2WQ96B02 151 aa13.09□□□□□ -0.31
SPNS3-201ENST00000355530 MYO9AB2RTY4 2548 aa13.08□□□□□ -0.32
SPNS3-201ENST00000355530 PRB1P04280 392 aa13.08□□□□□ -0.32
SPNS3-201ENST00000355530 COX6A2Q02221 97 aa13.08□□□□□ -0.32
SPNS3-201ENST00000355530 C2orf82Q6UX34 121 aa13.08□□□□□ -0.32
SPNS3-201ENST00000355530 Q6ZSV7 163 aa13.08□□□□□ -0.32
SPNS3-201ENST00000355530 CENPEQ02224 2701 aa13.08□□□□□ -0.32
SPNS3-201ENST00000355530 FAM208BQ5VWN6 2430 aa13.08□□□□□ -0.32
SPNS3-201ENST00000355530 LST1O00453 97 aa13.07□□□□□ -0.32
SPNS3-201ENST00000355530 DAZ2Q13117 558 aaKnown RBP13.07□□□□□ -0.32
SPNS3-201ENST00000355530 DAZ4Q86SG3 579 aaKnown RBP13.07□□□□□ -0.32
SPNS3-201ENST00000355530 DAZ3Q9NR90 486 aaKnown RBP13.07□□□□□ -0.32
SPNS3-201ENST00000355530 UBR5O95071 2799 aaPredicted RBP13.07□□□□□ -0.32
SPNS3-201ENST00000355530 TEX15Q9BXT5 2789 aa13.07□□□□□ -0.32
SPNS3-201ENST00000355530 TEX49A0A1B0GTD5 131 aa13.07□□□□□ -0.32
SPNS3-201ENST00000355530 H7C423 109 aa13.07□□□□□ -0.32
SPNS3-201ENST00000355530 DAND5Q8N907 189 aa13.07□□□□□ -0.32
SPNS3-201ENST00000355530 Q9H8V8 135 aa13.07□□□□□ -0.32
SPNS3-201ENST00000355530 LINC00694P0DN24 101 aa13.06□□□□□ -0.32
SPNS3-201ENST00000355530 HIST2H2BDQ6DRA6 164 aa13.06□□□□□ -0.32
SPNS3-201ENST00000355530 COPS9Q8WXC6 57 aa13.06□□□□□ -0.32
SPNS3-201ENST00000355530 LRRK2Q5S007 2527 aa13.06□□□□□ -0.32
SPNS3-201ENST00000355530 CITED1Q99966 193 aa13.06□□□□□ -0.32
SPNS3-201ENST00000355530 TRAV4A0A0B4J268 109 aa13.05□□□□□ -0.32
SPNS3-201ENST00000355530 SMIM1B2RUZ4 78 aa13.05□□□□□ -0.32
SPNS3-201ENST00000355530 LINC00308Q8TCZ7 52 aa13.05□□□□□ -0.32
SPNS3-201ENST00000355530 CLEC2BQ92478 149 aa13.05□□□□□ -0.32
SPNS3-201ENST00000355530 TRAV8-4A0A0B4J246 113 aa13.04□□□□□ -0.32
SPNS3-201ENST00000355530 Q6ZTI0 123 aa13.04□□□□□ -0.32
SPNS3-201ENST00000355530 NAV2Q8IVL1 2488 aa13.04□□□□□ -0.32
SPNS3-201ENST00000355530 PTPN13Q12923 2485 aa13.04□□□□□ -0.32
SPNS3-201ENST00000355530 NTM-AS1Q6ZSK4 140 aa13.04□□□□□ -0.32
SPNS3-201ENST00000355530 TEX29Q8N6K0 151 aa13.04□□□□□ -0.32
SPNS3-201ENST00000355530 ZNF462Q96JM2 2506 aa13.03□□□□□ -0.32
SPNS3-201ENST00000355530 DNAJC9-AS1A6NH13 148 aa13.03□□□□□ -0.32
SPNS3-201ENST00000355530 CCL24O00175 119 aa13.03□□□□□ -0.32
SPNS3-201ENST00000355530 CITED2Q99967 270 aaPredicted RBP13.03□□□□□ -0.32
SPNS3-201ENST00000355530 SNCGO76070 127 aa13.02□□□□□ -0.33
SPNS3-201ENST00000355530 KRTAP1-3Q8IUG1 177 aa13.02□□□□□ -0.33
SPNS3-201ENST00000355530 TRAV13-1A0A0B4J241 112 aa13.01□□□□□ -0.33
SPNS3-201ENST00000355530 A0A1W2PRX2 142 aa13.01□□□□□ -0.33
SPNS3-201ENST00000355530 NDUFA7O95182 113 aa13.01□□□□□ -0.33
SPNS3-201ENST00000355530 ZNF625Q96I27 306 aaPredicted RBP13.01□□□□□ -0.33
SPNS3-201ENST00000355530 CDC42SE2Q9NRR3 84 aa13.01□□□□□ -0.33
SPNS3-201ENST00000355530 PRIMA1Q86XR5 153 aa13□□□□□ -0.33
SPNS3-201ENST00000355530 CHD6Q8TD26 2715 aa13□□□□□ -0.33
SPNS3-201ENST00000355530 GAGE12JA6NER3 117 aa13□□□□□ -0.33
SPNS3-201ENST00000355530 F5H768 121 aa13□□□□□ -0.33
SPNS3-201ENST00000355530 GAGE4Q13068 117 aa13□□□□□ -0.33
SPNS3-201ENST00000355530 GAGE5Q13069 117 aa13□□□□□ -0.33
SPNS3-201ENST00000355530 ABCA12Q86UK0 2595 aa12.99□□□□□ -0.33
SPNS3-201ENST00000355530 HERV-K104P63124 156 aa12.99□□□□□ -0.33
SPNS3-201ENST00000355530 C11orf44Q8N8P7 122 aa12.99□□□□□ -0.33
SPNS3-201ENST00000355530 BBC3Q96PG8 261 aaPredicted RBP12.99□□□□□ -0.33
SPNS3-201ENST00000355530 PPDPFQ9H3Y8 114 aa12.98□□□□□ -0.33
SPNS3-201ENST00000355530 UBE2L6O14933 153 aa12.98□□□□□ -0.33
SPNS3-201ENST00000355530 CMC4P56277 68 aaPredicted RBP12.98□□□□□ -0.33
SPNS3-201ENST00000355530 MEIG1Q5JSS6 88 aa12.98□□□□□ -0.33
SPNS3-201ENST00000355530 TMEM243Q9BU79 118 aa12.98□□□□□ -0.33
SPNS3-201ENST00000355530 NOP10Q9NPE3 64 aaKnown RBP12.98□□□□□ -0.33
SPNS3-201ENST00000355530 FAM240AA0A1B0GVK7 77 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 GAGE2BQ13066 116 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 GAGE2EQ4V326 116 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 DEFB121Q5J5C9 76 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 C16orf74Q96GX8 76 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 ANAPC13Q9BS18 74 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 GAGE2DQ9UEU5 116 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 TRAV26-1A0A087WT03 109 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 COX7A2LO14548 114 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 SOSTDC1Q6X4U4 206 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 ZNF843Q8N446 348 aa12.97□□□□□ -0.33
SPNS3-201ENST00000355530 A0A0U1RRA0 63 aa12.96□□□□□ -0.33
SPNS3-201ENST00000355530 Q6Q795 121 aa12.95□□□□□ -0.34
SPNS3-201ENST00000355530 ZFYVE26Q68DK2 2539 aa12.95□□□□□ -0.34
SPNS3-201ENST00000355530 CRLF1O75462 422 aa12.95□□□□□ -0.34
SPNS3-201ENST00000355530 SHISA2Q6UWI4 295 aa12.95□□□□□ -0.34
SPNS3-201ENST00000355530 GIG44P09565 113 aaPredicted RBP12.94□□□□□ -0.34
SPNS3-201ENST00000355530 EPG5Q9HCE0 2579 aa12.94□□□□□ -0.34
SPNS3-201ENST00000355530 AKAP9Q99996 3911 aa12.94□□□□□ -0.34
SPNS3-201ENST00000355530 PLAC8L1A1L4L8 177 aa12.94□□□□□ -0.34
SPNS3-201ENST00000355530 MRPL23Q16540 153 aaKnown RBP12.94□□□□□ -0.34
SPNS3-201ENST00000355530 SVIPQ8NHG7 77 aa12.94□□□□□ -0.34
SPNS3-201ENST00000355530 ESM1Q9NQ30 184 aa12.94□□□□□ -0.34
SPNS3-201ENST00000355530 TRGV2A0A075B6R0 118 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms