RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 IGF2-ASQ6U949 168 aa6.13□□□□□ -1.43
SCN8A-201ENST00000354534 NOTCH4Q99466 2003 aa6.13□□□□□ -1.43
SCN8A-201ENST00000354534 TLN1Q9Y490 2541 aaKnown RBP6.13□□□□□ -1.43
SCN8A-201ENST00000354534 SPRY4Q9C004 299 aa6.13□□□□□ -1.43
SCN8A-201ENST00000354534 TMEM89A2RUT3 159 aa6.13□□□□□ -1.43
SCN8A-201ENST00000354534 TRBV6-5A0A0K0K1A5 114 aa6.13□□□□□ -1.43
SCN8A-201ENST00000354534 K7ENP7 123 aa6.13□□□□□ -1.43
SCN8A-201ENST00000354534 C6orf99Q4VX62 202 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 PCOTHQ58A44 107 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 PRLHP81277 87 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 YPEL4Q96NS1 127 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 LOC107984640A0A0U1RRK4 108 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 PKD1L2Q7Z442 2459 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 ACANP16112 2415 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 ABCA12Q86UK0 2595 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 IGHV7-81A0A0B4J1V7 117 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 TRBV10-1A0A0K0K1A3 114 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 TMEM254Q8TBM7 123 aa6.12□□□□□ -1.43
SCN8A-201ENST00000354534 AJUBAQ96IF1 538 aa6.11□□□□□ -1.43
SCN8A-201ENST00000354534 LY6LH3BQJ8 138 aa6.11□□□□□ -1.43
SCN8A-201ENST00000354534 ZNF706Q9Y5V0 76 aaPredicted RBP6.11□□□□□ -1.43
SCN8A-201ENST00000354534 TRBV7-7A0A0K0K1E9 115 aa6.11□□□□□ -1.43
SCN8A-201ENST00000354534 CHCHD10Q8WYQ3 142 aaPredicted RBP6.11□□□□□ -1.43
SCN8A-201ENST00000354534 TRBV30A0A0K0K1B3 111 aa6.11□□□□□ -1.43
SCN8A-201ENST00000354534 C15orf65H3BRN8 121 aa6.11□□□□□ -1.43
SCN8A-201ENST00000354534 C10orf25Q5T742 122 aa6.11□□□□□ -1.43
SCN8A-201ENST00000354534 PRO0255Q9UI72 69 aa6.11□□□□□ -1.43
SCN8A-201ENST00000354534 FN1P02751 2386 aaKnown RBP6.11□□□□□ -1.43
SCN8A-201ENST00000354534 RPL37AP8A6NKH3 93 aa6.1□□□□□ -1.43
SCN8A-201ENST00000354534 ZNF73O43830 326 aaPredicted RBP6.1□□□□□ -1.43
SCN8A-201ENST00000354534 CIRBP-AS1Q8TBR5 109 aa6.1□□□□□ -1.43
SCN8A-201ENST00000354534 LINC00308Q8TCZ7 52 aa6.1□□□□□ -1.43
SCN8A-201ENST00000354534 LINC01547P58512 204 aaPredicted RBP6.1□□□□□ -1.43
SCN8A-201ENST00000354534 VWCEQ96DN2 955 aa6.1□□□□□ -1.43
SCN8A-201ENST00000354534 Q6ZS92 163 aa6.1□□□□□ -1.43
SCN8A-201ENST00000354534 LINC00467Q9BRT7 94 aa6.1□□□□□ -1.43
SCN8A-201ENST00000354534 C11orf45Q8TAV5 145 aa6.1□□□□□ -1.43
SCN8A-201ENST00000354534 JMJD1CQ15652 2540 aa6.09□□□□□ -1.43
SCN8A-201ENST00000354534 CTRLP40313 264 aa6.09□□□□□ -1.43
SCN8A-201ENST00000354534 A0A1B0GXF2 115 aa6.09□□□□□ -1.43
SCN8A-201ENST00000354534 NRACQ8N912 160 aa6.09□□□□□ -1.43
SCN8A-201ENST00000354534 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.09□□□□□ -1.43
SCN8A-201ENST00000354534 PRAC2D3DTV9 90 aa6.09□□□□□ -1.44
SCN8A-201ENST00000354534 H0Y9P7 68 aa6.09□□□□□ -1.44
SCN8A-201ENST00000354534 PTPRBP23467 1997 aa6.09□□□□□ -1.44
SCN8A-201ENST00000354534 SMIM11BQ8TCY0 68 aa6.09□□□□□ -1.44
SCN8A-201ENST00000354534 PYGO1Q9Y3Y4 419 aa6.09□□□□□ -1.44
SCN8A-201ENST00000354534 C17orf82Q86X59 251 aaPredicted RBP6.08□□□□□ -1.44
SCN8A-201ENST00000354534 C20orf203Q8NBC4 194 aa6.08□□□□□ -1.44
SCN8A-201ENST00000354534 PROK2Q9HC23 129 aa6.08□□□□□ -1.44
SCN8A-201ENST00000354534 DHRS4-AS1Q9P1J3 65 aa6.08□□□□□ -1.44
SCN8A-201ENST00000354534 COL4A5P29400 1685 aa6.08□□□□□ -1.44
SCN8A-201ENST00000354534 PATE2Q6UY27 113 aa6.08□□□□□ -1.44
SCN8A-201ENST00000354534 C1orf147Q96MC9 270 aaPredicted RBP6.08□□□□□ -1.44
SCN8A-201ENST00000354534 IBA57-AS1B1ANH7 110 aa6.08□□□□□ -1.44
SCN8A-201ENST00000354534 LOC100131303A0A0U1RQF7 123 aa6.08□□□□□ -1.44
SCN8A-201ENST00000354534 CRIP2P52943 208 aaPredicted RBP6.08□□□□□ -1.44
SCN8A-201ENST00000354534 DEFB1P60022 68 aa6.08□□□□□ -1.44
SCN8A-201ENST00000354534 IGHV6-1A0A0B4J1U7 121 aa6.07□□□□□ -1.44
SCN8A-201ENST00000354534 CXCL6P80162 114 aa6.07□□□□□ -1.44
SCN8A-201ENST00000354534 RITA1Q96K30 269 aa6.07□□□□□ -1.44
SCN8A-201ENST00000354534 A0A1B0GU69 56 aa6.07□□□□□ -1.44
SCN8A-201ENST00000354534 XGP55808 180 aa6.07□□□□□ -1.44
SCN8A-201ENST00000354534 CDKN2A-AS1Q9UH64 79 aa6.07□□□□□ -1.44
SCN8A-201ENST00000354534 USP9XQ93008 2570 aaPredicted RBP6.07□□□□□ -1.44
SCN8A-201ENST00000354534 SMAD5-AS1Q9Y6J3 95 aa6.07□□□□□ -1.44
SCN8A-201ENST00000354534 TNFRSF13BO14836 293 aaPredicted RBP6.07□□□□□ -1.44
SCN8A-201ENST00000354534 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
SCN8A-201ENST00000354534 H7C423 109 aa6.06□□□□□ -1.44
SCN8A-201ENST00000354534 ZFP36P26651 326 aaKnown RBP6.06□□□□□ -1.44
SCN8A-201ENST00000354534 IGFL3Q6UXB1 125 aa6.06□□□□□ -1.44
SCN8A-201ENST00000354534 M0R2N4 97 aa6.06□□□□□ -1.44
SCN8A-201ENST00000354534 INSL3P51460 131 aa6.06□□□□□ -1.44
SCN8A-201ENST00000354534 TP53TG3Q9ULZ0 132 aa6.06□□□□□ -1.44
SCN8A-201ENST00000354534 J3QKU1 62 aa6.06□□□□□ -1.44
SCN8A-201ENST00000354534 C7orf65Q6ZTY9 151 aa6.06□□□□□ -1.44
SCN8A-201ENST00000354534 I3L2K1 104 aa6.06□□□□□ -1.44
SCN8A-201ENST00000354534 LY6G6EA0A0G2JKS1 128 aa6.06□□□□□ -1.44
SCN8A-201ENST00000354534 TRAV10A0A0B4J240 114 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 RBX1P62877 108 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 MDFIQ99750 246 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 PLAC8L1A1L4L8 177 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 IL17DQ8TAD2 202 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 Q6JHZ5 121 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 C8orf87E5RJ46 101 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 Q9UF83 564 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 NCOR2Q9Y618 2525 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 LIMD2Q9BT23 127 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 MAPKAPK5-AS1Q8N8E1 139 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 CTSZQ9UBR2 303 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 LRP4O75096 1905 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 IGF2RP11717 2491 aa6.05□□□□□ -1.44
SCN8A-201ENST00000354534 MTORP42345 2549 aa6.04□□□□□ -1.44
SCN8A-201ENST00000354534 IGLV2-18A0A075B6J9 118 aa6.04□□□□□ -1.44
SCN8A-201ENST00000354534 IGLV1-44P01699 117 aa6.04□□□□□ -1.44
SCN8A-201ENST00000354534 K7EIM0 57 aa6.04□□□□□ -1.44
SCN8A-201ENST00000354534 FRMD6-AS1P0C7T7 363 aa6.04□□□□□ -1.44
SCN8A-201ENST00000354534 NRGNQ92686 78 aa6.04□□□□□ -1.44
SCN8A-201ENST00000354534 SBSPONQ8IVN8 264 aa6.04□□□□□ -1.44
SCN8A-201ENST00000354534 C11orf53Q8IXP5 236 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms