RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 SLC25A29Q8N8R3 303 aa13.08□□□□□ -0.32
APP-203ENST00000354192 TMEM223A0PJW6 202 aa13.08□□□□□ -0.32
APP-203ENST00000354192 TAL2Q16559 108 aa13.08□□□□□ -0.32
APP-203ENST00000354192 RPL36AP83881 106 aaKnown RBP13.08□□□□□ -0.32
APP-203ENST00000354192 RPL36ALQ969Q0 106 aaKnown RBP13.08□□□□□ -0.32
APP-203ENST00000354192 PTH2Q96A98 100 aa13.08□□□□□ -0.32
APP-203ENST00000354192 CHCHD7Q9BUK0 85 aa13.08□□□□□ -0.32
APP-203ENST00000354192 CDKN2A-AS1Q9UH64 79 aa13.08□□□□□ -0.32
APP-203ENST00000354192 TEX29Q8N6K0 151 aa13.07□□□□□ -0.32
APP-203ENST00000354192 LINC00482Q8N8I6 264 aa13.07□□□□□ -0.32
APP-203ENST00000354192 NDUFA12Q9UI09 145 aa13.07□□□□□ -0.32
APP-203ENST00000354192 TSPAN13O95857 204 aa13.06□□□□□ -0.32
APP-203ENST00000354192 C10orf126Q8N4M7 172 aa13.06□□□□□ -0.32
APP-203ENST00000354192 TOMM7Q9P0U1 55 aa13.06□□□□□ -0.32
APP-203ENST00000354192 MAST4O15021 2626 aa13.05□□□□□ -0.32
APP-203ENST00000354192 UBE2L6O14933 153 aa13.05□□□□□ -0.32
APP-203ENST00000354192 UBE2D4Q9Y2X8 147 aa13.05□□□□□ -0.32
APP-203ENST00000354192 LY6G6DO95868 133 aa13.05□□□□□ -0.32
APP-203ENST00000354192 LEPROTO15243 131 aa13.04□□□□□ -0.32
APP-203ENST00000354192 CFC1BP0CG36 223 aa13.04□□□□□ -0.32
APP-203ENST00000354192 CFC1P0CG37 223 aa13.04□□□□□ -0.32
APP-203ENST00000354192 GAGE6Q13070 117 aa13.04□□□□□ -0.32
APP-203ENST00000354192 SPATA3Q8NHX4 192 aa13.04□□□□□ -0.32
APP-203ENST00000354192 TRRAPQ9Y4A5 3859 aa13.04□□□□□ -0.32
APP-203ENST00000354192 RNASE1P07998 156 aaKnown RBP13.04□□□□□ -0.32
APP-203ENST00000354192 FHL3Q13643 280 aa13.04□□□□□ -0.32
APP-203ENST00000354192 STAB1Q9NY15 2570 aa13.04□□□□□ -0.32
APP-203ENST00000354192 INSL3P51460 131 aa13.04□□□□□ -0.32
APP-203ENST00000354192 NDUFA11Q86Y39 141 aa13.04□□□□□ -0.32
APP-203ENST00000354192 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
APP-203ENST00000354192 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
APP-203ENST00000354192 COX6A2Q02221 97 aa13.02□□□□□ -0.32
APP-203ENST00000354192 RS1O15537 224 aa13.02□□□□□ -0.33
APP-203ENST00000354192 NFE4Q86UQ8 179 aa13.02□□□□□ -0.33
APP-203ENST00000354192 C11orf68Q9H3H3 251 aaKnown RBP13.02□□□□□ -0.33
APP-203ENST00000354192 A0A0J9YXY3 114 aa13.02□□□□□ -0.33
APP-203ENST00000354192 K7EQD1 137 aa13.02□□□□□ -0.33
APP-203ENST00000354192 TMEM263Q8WUH6 116 aaKnown RBP13.02□□□□□ -0.33
APP-203ENST00000354192 CLPSL2Q6UWE3 100 aa13.01□□□□□ -0.33
APP-203ENST00000354192 CHCHD5Q9BSY4 110 aa13.01□□□□□ -0.33
APP-203ENST00000354192 NOTCH1P46531 2555 aa13.01□□□□□ -0.33
APP-203ENST00000354192 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13□□□□□ -0.33
APP-203ENST00000354192 FAM104AQ969W3 186 aa13□□□□□ -0.33
APP-203ENST00000354192 TRAV25A0A0B4J276 109 aa13□□□□□ -0.33
APP-203ENST00000354192 TMEM262E9PQX1 116 aa13□□□□□ -0.33
APP-203ENST00000354192 CRLF1O75462 422 aa13□□□□□ -0.33
APP-203ENST00000354192 HILS1P60008 231 aa13□□□□□ -0.33
APP-203ENST00000354192 ADAMTSL4-AS1Q5T5F5 129 aa13□□□□□ -0.33
APP-203ENST00000354192 PRO1854Q9UHT4 67 aa13□□□□□ -0.33
APP-203ENST00000354192 GIG44P09565 113 aaPredicted RBP13□□□□□ -0.33
APP-203ENST00000354192 MEIG1Q5JSS6 88 aa12.99□□□□□ -0.33
APP-203ENST00000354192 AMELXQ99217 191 aa12.99□□□□□ -0.33
APP-203ENST00000354192 TMEM238C9JI98 176 aa12.99□□□□□ -0.33
APP-203ENST00000354192 HTN3P15516 51 aa12.99□□□□□ -0.33
APP-203ENST00000354192 KRTAP10-3P60369 221 aa12.98□□□□□ -0.33
APP-203ENST00000354192 NTM-AS1Q6ZSK4 140 aa12.98□□□□□ -0.33
APP-203ENST00000354192 GTSF1LQ9H1H1 148 aa12.98□□□□□ -0.33
APP-203ENST00000354192 ANK3Q12955 4377 aaKnown RBP12.98□□□□□ -0.33
APP-203ENST00000354192 IGLV1-51P01701 117 aa12.98□□□□□ -0.33
APP-203ENST00000354192 SPANXA1Q9NS26 97 aa12.97□□□□□ -0.33
APP-203ENST00000354192 ERG28Q9UKR5 140 aa12.97□□□□□ -0.33
APP-203ENST00000354192 Q9H8V8 135 aa12.97□□□□□ -0.33
APP-203ENST00000354192 IGHV1-58A0A0C4DH39 117 aa12.97□□□□□ -0.33
APP-203ENST00000354192 TCL1BO95988 128 aa12.97□□□□□ -0.33
APP-203ENST00000354192 UBE2D1P51668 147 aa12.96□□□□□ -0.33
APP-203ENST00000354192 BEAN1Q3B7T3 259 aa12.96□□□□□ -0.33
APP-203ENST00000354192 A8MTW9 85 aa12.96□□□□□ -0.33
APP-203ENST00000354192 EIF4EBP3O60516 100 aaPredicted RBP12.96□□□□□ -0.33
APP-203ENST00000354192 MRPS36P82909 103 aaKnown RBP12.96□□□□□ -0.33
APP-203ENST00000354192 DEFB135Q30KP9 77 aa12.95□□□□□ -0.34
APP-203ENST00000354192 VSIG2Q96IQ7 327 aa12.95□□□□□ -0.34
APP-203ENST00000354192 PYGO1Q9Y3Y4 419 aa12.95□□□□□ -0.34
APP-203ENST00000354192 G3V4G9 280 aa12.94□□□□□ -0.34
APP-203ENST00000354192 PRIMA1Q86XR5 153 aa12.94□□□□□ -0.34
APP-203ENST00000354192 C9JAW5 83 aa12.93□□□□□ -0.34
APP-203ENST00000354192 TMEM101Q96IK0 257 aa12.93□□□□□ -0.34
APP-203ENST00000354192 TRAV4A0A0B4J268 109 aa12.93□□□□□ -0.34
APP-203ENST00000354192 F8W1H4 67 aa12.93□□□□□ -0.34
APP-203ENST00000354192 SMAGPQ0VAQ4 97 aa12.93□□□□□ -0.34
APP-203ENST00000354192 DNAJC30Q96LL9 226 aa12.93□□□□□ -0.34
APP-203ENST00000354192 TMEM243Q9BU79 118 aa12.93□□□□□ -0.34
APP-203ENST00000354192 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
APP-203ENST00000354192 CIDEAO60543 219 aa12.92□□□□□ -0.34
APP-203ENST00000354192 LINC00242Q5T6M2 205 aa12.92□□□□□ -0.34
APP-203ENST00000354192 C1QTNF4Q9BXJ3 329 aa12.92□□□□□ -0.34
APP-203ENST00000354192 TINCRA0A1B0GVN0 87 aa12.91□□□□□ -0.34
APP-203ENST00000354192 C5orf38Q86SI9 138 aa12.91□□□□□ -0.34
APP-203ENST00000354192 SPANXB1Q9NS25 103 aaPredicted RBP12.91□□□□□ -0.34
APP-203ENST00000354192 C19orf73Q9NVV2 129 aa12.9□□□□□ -0.34
APP-203ENST00000354192 J3QR89 54 aa12.89□□□□□ -0.35
APP-203ENST00000354192 GYPEP15421 78 aa12.89□□□□□ -0.35
APP-203ENST00000354192 UBE2D3P61077 147 aa12.89□□□□□ -0.35
APP-203ENST00000354192 UBE2D2P62837 147 aa12.89□□□□□ -0.35
APP-203ENST00000354192 IGLV4-60A0A075B6I1 120 aa12.88□□□□□ -0.35
APP-203ENST00000354192 C16orf95Q9H693 158 aa12.88□□□□□ -0.35
APP-203ENST00000354192 IGHV3-33P01772 117 aa12.88□□□□□ -0.35
APP-203ENST00000354192 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
APP-203ENST00000354192 DAZ4Q86SG3 579 aaKnown RBP12.88□□□□□ -0.35
APP-203ENST00000354192 DAZ3Q9NR90 486 aaKnown RBP12.88□□□□□ -0.35
APP-203ENST00000354192 PLAC8L1A1L4L8 177 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms