RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 PYGO1Q9Y3Y4 419 aa13.61□□□□□ -0.23
SCARF1-202ENST00000348987 CFHR3Q02985 330 aa13.61□□□□□ -0.23
SCARF1-202ENST00000348987 TEX15Q9BXT5 2789 aa13.61□□□□□ -0.23
SCARF1-202ENST00000348987 ZNF469Q96JG9 3925 aaPredicted RBP13.61□□□□□ -0.23
SCARF1-202ENST00000348987 BBC3Q96PG8 261 aaPredicted RBP13.6□□□□□ -0.23
SCARF1-202ENST00000348987 LINC00526Q96FQ7 95 aa13.6□□□□□ -0.23
SCARF1-202ENST00000348987 IGHV4-59P01825 116 aa13.6□□□□□ -0.23
SCARF1-202ENST00000348987 DAZ2Q13117 558 aaKnown RBP13.6□□□□□ -0.23
SCARF1-202ENST00000348987 DAZ4Q86SG3 579 aaKnown RBP13.6□□□□□ -0.23
SCARF1-202ENST00000348987 DAZ3Q9NR90 486 aaKnown RBP13.6□□□□□ -0.23
SCARF1-202ENST00000348987 NBPF19A0A087WUL8 3843 aa13.59□□□□□ -0.23
SCARF1-202ENST00000348987 A0A0U1RRA0 63 aa13.59□□□□□ -0.23
SCARF1-202ENST00000348987 PROK1P58294 105 aa13.59□□□□□ -0.23
SCARF1-202ENST00000348987 TINCRA0A1B0GVN0 87 aa13.58□□□□□ -0.24
SCARF1-202ENST00000348987 COX7A2LO14548 114 aa13.57□□□□□ -0.24
SCARF1-202ENST00000348987 IGHV1OR15-1A0A075B7D0 117 aa13.57□□□□□ -0.24
SCARF1-202ENST00000348987 Q8N2B8 174 aa13.57□□□□□ -0.24
SCARF1-202ENST00000348987 Q9UF83 564 aa13.57□□□□□ -0.24
SCARF1-202ENST00000348987 SONP18583 2426 aaKnown RBP13.57□□□□□ -0.24
SCARF1-202ENST00000348987 PSMB8P28062 276 aa13.56□□□□□ -0.24
SCARF1-202ENST00000348987 SPINK13Q1W4C9 94 aa13.56□□□□□ -0.24
SCARF1-202ENST00000348987 DEFB112Q30KQ8 113 aa13.56□□□□□ -0.24
SCARF1-202ENST00000348987 ZNF625Q96I27 306 aaPredicted RBP13.56□□□□□ -0.24
SCARF1-202ENST00000348987 FAM19A5Q7Z5A7 132 aaPredicted RBP13.55□□□□□ -0.24
SCARF1-202ENST00000348987 CDKN2A-AS1Q9UH64 79 aa13.55□□□□□ -0.24
SCARF1-202ENST00000348987 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.54□□□□□ -0.24
SCARF1-202ENST00000348987 IGKV2-29A2NJV5 120 aaPredicted RBP13.54□□□□□ -0.24
SCARF1-202ENST00000348987 TIMM17BO60830 172 aa13.54□□□□□ -0.24
SCARF1-202ENST00000348987 LINC00308Q8TCZ7 52 aa13.54□□□□□ -0.24
SCARF1-202ENST00000348987 BAALC-AS2P0C853 105 aa13.54□□□□□ -0.24
SCARF1-202ENST00000348987 COX7CP15954 63 aa13.54□□□□□ -0.24
SCARF1-202ENST00000348987 SDIM1Q6ZPB5 146 aa13.54□□□□□ -0.24
SCARF1-202ENST00000348987 B4DSR2 109 aa13.53□□□□□ -0.24
SCARF1-202ENST00000348987 HTN1P15515 57 aa13.53□□□□□ -0.24
SCARF1-202ENST00000348987 C5orf38Q86SI9 138 aa13.53□□□□□ -0.24
SCARF1-202ENST00000348987 EDA2RQ9HAV5 297 aa13.53□□□□□ -0.24
SCARF1-202ENST00000348987 CCDC168Q8NDH2 2452 aa13.53□□□□□ -0.24
SCARF1-202ENST00000348987 J3KT08 172 aa13.53□□□□□ -0.24
SCARF1-202ENST00000348987 TIRAPP58753 221 aa13.53□□□□□ -0.24
SCARF1-202ENST00000348987 UBE2D4Q9Y2X8 147 aa13.53□□□□□ -0.24
SCARF1-202ENST00000348987 UBR5O95071 2799 aaPredicted RBP13.53□□□□□ -0.24
SCARF1-202ENST00000348987 K7EMT4 169 aa13.52□□□□□ -0.24
SCARF1-202ENST00000348987 ATP5G1P05496 136 aa13.52□□□□□ -0.25
SCARF1-202ENST00000348987 KRTAP10-9P60411 292 aa13.52□□□□□ -0.25
SCARF1-202ENST00000348987 CIRBPQ14011 172 aaKnown RBP13.52□□□□□ -0.25
SCARF1-202ENST00000348987 C2orf48Q96LS8 159 aa13.52□□□□□ -0.25
SCARF1-202ENST00000348987 PEMTQ9UBM1 199 aa13.52□□□□□ -0.25
SCARF1-202ENST00000348987 C22orf24Q9Y442 160 aa13.52□□□□□ -0.25
SCARF1-202ENST00000348987 NDUFA1O15239 70 aa13.51□□□□□ -0.25
SCARF1-202ENST00000348987 BEAN1Q3B7T3 259 aa13.51□□□□□ -0.25
SCARF1-202ENST00000348987 C5orf47Q569G3 176 aa13.51□□□□□ -0.25
SCARF1-202ENST00000348987 GAGE2AQ6NT46 116 aa13.51□□□□□ -0.25
SCARF1-202ENST00000348987 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.51□□□□□ -0.25
SCARF1-202ENST00000348987 SYNJ2BPP57105 145 aa13.51□□□□□ -0.25
SCARF1-202ENST00000348987 LRRC75A-AS1Q8N1F1 130 aa13.51□□□□□ -0.25
SCARF1-202ENST00000348987 CHCHD7Q9BUK0 85 aa13.51□□□□□ -0.25
SCARF1-202ENST00000348987 KNCNA6PVL3 124 aa13.5□□□□□ -0.25
SCARF1-202ENST00000348987 CXCL5P42830 114 aa13.5□□□□□ -0.25
SCARF1-202ENST00000348987 Q9H8V8 135 aa13.5□□□□□ -0.25
SCARF1-202ENST00000348987 SMIM9A6NGZ8 99 aa13.5□□□□□ -0.25
SCARF1-202ENST00000348987 SOSTDC1Q6X4U4 206 aa13.49□□□□□ -0.25
SCARF1-202ENST00000348987 FAM218AQ96MZ4 157 aa13.49□□□□□ -0.25
SCARF1-202ENST00000348987 NF1P21359 2839 aa13.49□□□□□ -0.25
SCARF1-202ENST00000348987 hADV29S1A0JD25 119 aa13.49□□□□□ -0.25
SCARF1-202ENST00000348987 SETD2Q9BYW2 2564 aaPredicted RBP13.49□□□□□ -0.25
SCARF1-202ENST00000348987 LINC00467Q9BRT7 94 aa13.48□□□□□ -0.25
SCARF1-202ENST00000348987 CYSTM1Q9H1C7 97 aa13.48□□□□□ -0.25
SCARF1-202ENST00000348987 IGHV3-38A0A0C4DH36 116 aa13.47□□□□□ -0.25
SCARF1-202ENST00000348987 A0A1B0GX51 115 aa13.47□□□□□ -0.25
SCARF1-202ENST00000348987 CRYGAP11844 174 aa13.47□□□□□ -0.25
SCARF1-202ENST00000348987 COX6A2Q02221 97 aa13.47□□□□□ -0.25
SCARF1-202ENST00000348987 HIST2H2BDQ6DRA6 164 aa13.47□□□□□ -0.25
SCARF1-202ENST00000348987 APCP25054 2843 aa13.47□□□□□ -0.25
SCARF1-202ENST00000348987 NIPBLQ6KC79 2804 aaeCLIP13.47□□□□□ -0.25
SCARF1-202ENST00000348987 RS1O15537 224 aa13.47□□□□□ -0.25
SCARF1-202ENST00000348987 TRACP01848 142 aa13.47□□□□□ -0.25
SCARF1-202ENST00000348987 PRM2P04554 102 aa13.46□□□□□ -0.25
SCARF1-202ENST00000348987 Q6ZSN1 163 aa13.46□□□□□ -0.25
SCARF1-202ENST00000348987 Q9HAA7 133 aa13.46□□□□□ -0.25
SCARF1-202ENST00000348987 NACAE9PAV3 2078 aa13.46□□□□□ -0.25
SCARF1-202ENST00000348987 K7EQG2 157 aa13.46□□□□□ -0.25
SCARF1-202ENST00000348987 CHD6Q8TD26 2715 aa13.45□□□□□ -0.26
SCARF1-202ENST00000348987 TRAV13-1A0A0B4J241 112 aa13.45□□□□□ -0.26
SCARF1-202ENST00000348987 SNRPD3P62318 126 aaKnown RBP13.45□□□□□ -0.26
SCARF1-202ENST00000348987 HIST1H4AP62805 103 aaKnown RBP13.44□□□□□ -0.26
SCARF1-202ENST00000348987 RBMY1A1P0DJD3 496 aaKnown RBP13.43□□□□□ -0.26
SCARF1-202ENST00000348987 RBMY1CP0DJD4 496 aa13.43□□□□□ -0.26
SCARF1-202ENST00000348987 HOXD3P31249 432 aaPredicted RBP13.43□□□□□ -0.26
SCARF1-202ENST00000348987 RBMY1FQ15415 496 aaKnown RBP13.43□□□□□ -0.26
SCARF1-202ENST00000348987 ATOX1O00244 68 aa13.43□□□□□ -0.26
SCARF1-202ENST00000348987 INAFM2P0DMQ5 153 aa13.43□□□□□ -0.26
SCARF1-202ENST00000348987 DEFB136Q30KP8 78 aa13.43□□□□□ -0.26
SCARF1-202ENST00000348987 C18orf65Q6ZTR6 163 aa13.43□□□□□ -0.26
SCARF1-202ENST00000348987 ZNF843Q8N446 348 aa13.42□□□□□ -0.26
SCARF1-202ENST00000348987 IGLV5-45A0A087WSX0 123 aa13.42□□□□□ -0.26
SCARF1-202ENST00000348987 A0A096LNT2 108 aa13.42□□□□□ -0.26
SCARF1-202ENST00000348987 LINC01356Q8N9X3 169 aa13.41□□□□□ -0.26
SCARF1-202ENST00000348987 MALP21145 153 aa13.41□□□□□ -0.26
SCARF1-202ENST00000348987 PIK3CD-AS1Q5SR53 167 aa13.41□□□□□ -0.26
SCARF1-202ENST00000348987 KIR2DL5BQ8NHK3 375 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms