RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 WFDC9Q8NEX5 89 aa8.1□□□□□ -1.11
RPL28-201ENST00000344063 TRAV23DV6A0A075B6W5 121 aa8.1□□□□□ -1.11
RPL28-201ENST00000344063 TRBV30A0A0K0K1B3 111 aa8.1□□□□□ -1.11
RPL28-201ENST00000344063 H0YGX0 51 aa8.1□□□□□ -1.11
RPL28-201ENST00000344063 C4orf3Q8WVX3 66 aa8.1□□□□□ -1.11
RPL28-201ENST00000344063 C3orf22Q8N5N4 141 aa8.1□□□□□ -1.11
RPL28-201ENST00000344063 PSMG3-AS1Q96PY0 264 aa8.1□□□□□ -1.11
RPL28-201ENST00000344063 PIK3CD-AS1Q5SR53 167 aa8.09□□□□□ -1.11
RPL28-201ENST00000344063 USP9XQ93008 2570 aaPredicted RBP8.09□□□□□ -1.11
RPL28-201ENST00000344063 HIVEP3Q5T1R4 2406 aa8.09□□□□□ -1.11
RPL28-201ENST00000344063 USP9YO00507 2555 aaPredicted RBP8.09□□□□□ -1.11
RPL28-201ENST00000344063 F5H768 121 aa8.09□□□□□ -1.11
RPL28-201ENST00000344063 H7C423 109 aa8.09□□□□□ -1.11
RPL28-201ENST00000344063 M0QXV9 152 aa8.09□□□□□ -1.11
RPL28-201ENST00000344063 COX7A2LO14548 114 aa8.09□□□□□ -1.11
RPL28-201ENST00000344063 UBE2D3P61077 147 aa8.09□□□□□ -1.11
RPL28-201ENST00000344063 UBE2D2P62837 147 aa8.09□□□□□ -1.11
RPL28-201ENST00000344063 TMEM263Q8WUH6 116 aaKnown RBP8.09□□□□□ -1.11
RPL28-201ENST00000344063 MAP6D1Q9H9H5 199 aa8.09□□□□□ -1.11
RPL28-201ENST00000344063 ZNF580Q9UK33 172 aa8.09□□□□□ -1.11
RPL28-201ENST00000344063 RAI1Q7Z5J4 1906 aaPredicted RBP8.09□□□□□ -1.11
RPL28-201ENST00000344063 SLPIP03973 132 aa8.08□□□□□ -1.12
RPL28-201ENST00000344063 LINC00694P0DN24 101 aa8.08□□□□□ -1.12
RPL28-201ENST00000344063 COX7B2Q8TF08 81 aa8.08□□□□□ -1.12
RPL28-201ENST00000344063 PTPRBP23467 1997 aa8.08□□□□□ -1.12
RPL28-201ENST00000344063 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
RPL28-201ENST00000344063 FN1P02751 2386 aaKnown RBP8.07□□□□□ -1.12
RPL28-201ENST00000344063 APOC4P55056 127 aa8.07□□□□□ -1.12
RPL28-201ENST00000344063 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
RPL28-201ENST00000344063 LINC00467Q9BRT7 94 aa8.07□□□□□ -1.12
RPL28-201ENST00000344063 PYGO1Q9Y3Y4 419 aa8.07□□□□□ -1.12
RPL28-201ENST00000344063 NDUFA7O95182 113 aa8.07□□□□□ -1.12
RPL28-201ENST00000344063 ANGP03950 147 aaKnown RBP8.07□□□□□ -1.12
RPL28-201ENST00000344063 CDSNQ15517 529 aa8.07□□□□□ -1.12
RPL28-201ENST00000344063 C20orf197Q8N268 126 aa8.07□□□□□ -1.12
RPL28-201ENST00000344063 PRM2P04554 102 aa8.07□□□□□ -1.12
RPL28-201ENST00000344063 HIST2H2BCQ6DN03 193 aa8.06□□□□□ -1.12
RPL28-201ENST00000344063 PRORYQ9H606 182 aa8.06□□□□□ -1.12
RPL28-201ENST00000344063 ANKRD11Q6UB99 2663 aaPredicted RBP8.06□□□□□ -1.12
RPL28-201ENST00000344063 IGLV10-54A0A075B6I4 117 aa8.06□□□□□ -1.12
RPL28-201ENST00000344063 IGLV1-40P01703 118 aa8.06□□□□□ -1.12
RPL28-201ENST00000344063 LINC00308Q8TCZ7 52 aa8.06□□□□□ -1.12
RPL28-201ENST00000344063 C9orf85Q96MD7 179 aa8.06□□□□□ -1.12
RPL28-201ENST00000344063 IGLV2-18A0A075B6J9 118 aa8.06□□□□□ -1.12
RPL28-201ENST00000344063 MPLKIPQ8TAP9 179 aa8.06□□□□□ -1.12
RPL28-201ENST00000344063 KLK5Q9Y337 293 aaPredicted RBP8.06□□□□□ -1.12
RPL28-201ENST00000344063 IGLV4-69A0A075B6H9 119 aa8.05□□□□□ -1.12
RPL28-201ENST00000344063 LST1O00453 97 aa8.05□□□□□ -1.12
RPL28-201ENST00000344063 Q6YL49 198 aa8.05□□□□□ -1.12
RPL28-201ENST00000344063 IGIPA6NJ69 53 aa8.05□□□□□ -1.12
RPL28-201ENST00000344063 ZNF561-AS1K7EIQ3 104 aa8.05□□□□□ -1.12
RPL28-201ENST00000344063 PSCAO43653 123 aa8.05□□□□□ -1.12
RPL28-201ENST00000344063 DCANP1Q8TF63 244 aa8.05□□□□□ -1.12
RPL28-201ENST00000344063 NCR3O14931 201 aa8.05□□□□□ -1.12
RPL28-201ENST00000344063 TSHBP01222 138 aa8.05□□□□□ -1.12
RPL28-201ENST00000344063 CRYGDP07320 174 aa8.05□□□□□ -1.12
RPL28-201ENST00000344063 PRO0461Q9UI25 63 aa8.04□□□□□ -1.12
RPL28-201ENST00000344063 GYPEP15421 78 aa8.04□□□□□ -1.12
RPL28-201ENST00000344063 TIRAPP58753 221 aa8.03□□□□□ -1.12
RPL28-201ENST00000344063 HIST2H2BDQ6DRA6 164 aa8.03□□□□□ -1.12
RPL28-201ENST00000344063 POM121L12Q8N7R1 296 aa8.03□□□□□ -1.12
RPL28-201ENST00000344063 FAM240AA0A1B0GVK7 77 aa8.03□□□□□ -1.12
RPL28-201ENST00000344063 DEFB114Q30KQ6 69 aa8.03□□□□□ -1.12
RPL28-201ENST00000344063 C10orf99Q6UWK7 81 aa8.03□□□□□ -1.12
RPL28-201ENST00000344063 BRI3O95415 125 aa8.02□□□□□ -1.12
RPL28-201ENST00000344063 PCSK5Q92824 1860 aa8.02□□□□□ -1.12
RPL28-201ENST00000344063 PRRC2AP48634 2157 aaKnown RBP8.02□□□□□ -1.12
RPL28-201ENST00000344063 LOC107984640A0A0U1RRK4 108 aa8.02□□□□□ -1.13
RPL28-201ENST00000344063 WFDC11Q8NEX6 87 aa8.02□□□□□ -1.13
RPL28-201ENST00000344063 XIRP2A4UGR9 3374 aa8.01□□□□□ -1.13
RPL28-201ENST00000344063 NDUFA1O15239 70 aa8.01□□□□□ -1.13
RPL28-201ENST00000344063 TIMM17BO60830 172 aa8.01□□□□□ -1.13
RPL28-201ENST00000344063 Q6ZTI0 123 aa8.01□□□□□ -1.13
RPL28-201ENST00000344063 ESM1Q9NQ30 184 aa8.01□□□□□ -1.13
RPL28-201ENST00000344063 PPDPFQ9H3Y8 114 aa8.01□□□□□ -1.13
RPL28-201ENST00000344063 FAM236DA0A1B0GTK5 79 aa8□□□□□ -1.13
RPL28-201ENST00000344063 FAM236CP0DP71 79 aa8□□□□□ -1.13
RPL28-201ENST00000344063 MP68P56378 58 aa8□□□□□ -1.13
RPL28-201ENST00000344063 ADAMTSL4-AS1Q5T5F5 129 aa8□□□□□ -1.13
RPL28-201ENST00000344063 ENHOQ6UWT2 76 aa8□□□□□ -1.13
RPL28-201ENST00000344063 IGHV4-31P0DP07 118 aa8□□□□□ -1.13
RPL28-201ENST00000344063 A0A087WVE0 104 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 COX7CP15954 63 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 EDN2P20800 178 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 PKD1L2Q7Z442 2459 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 C1orf195Q5TG92 126 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 Q6Q795 121 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 IGHV4-28A0A0C4DH34 117 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 CXCL5P42830 114 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 C9orf66Q5T8R8 295 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 A0A1W2PPR1 153 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 USP17L23D6RBM5 183 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 LRRC75A-AS1Q8N1F1 130 aa7.99□□□□□ -1.13
RPL28-201ENST00000344063 NDUFS5O43920 106 aa7.98□□□□□ -1.13
RPL28-201ENST00000344063 SCXQ7RTU7 201 aa7.98□□□□□ -1.13
RPL28-201ENST00000344063 DEFB105AQ8NG35 78 aa7.98□□□□□ -1.13
RPL28-201ENST00000344063 LINC01546A6NGU7 62 aa7.98□□□□□ -1.13
RPL28-201ENST00000344063 MRPS36P82909 103 aaKnown RBP7.98□□□□□ -1.13
RPL28-201ENST00000344063 NKAPP1Q8N9T2 125 aa7.98□□□□□ -1.13
RPL28-201ENST00000344063 UPK3BQ9BT76 320 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms