RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 GEMIN7Q9H840 131 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-202ENST00000343765 PRO0461Q9UI25 63 aa10.69□□□□□ -0.7
VIPAS39-202ENST00000343765 PLA2G2AP14555 144 aa10.69□□□□□ -0.7
VIPAS39-202ENST00000343765 ZNF418Q8TF45 676 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-202ENST00000343765 IL17DQ8TAD2 202 aa10.68□□□□□ -0.7
VIPAS39-202ENST00000343765 IGHV1-58A0A0C4DH39 117 aa10.68□□□□□ -0.7
VIPAS39-202ENST00000343765 TINCRA0A1B0GVN0 87 aa10.68□□□□□ -0.7
VIPAS39-202ENST00000343765 GAGE12JA6NER3 117 aa10.68□□□□□ -0.7
VIPAS39-202ENST00000343765 TMEM238C9JI98 176 aa10.68□□□□□ -0.7
VIPAS39-202ENST00000343765 GAGE4Q13068 117 aa10.68□□□□□ -0.7
VIPAS39-202ENST00000343765 GAGE5Q13069 117 aa10.68□□□□□ -0.7
VIPAS39-202ENST00000343765 TMEM263Q8WUH6 116 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-202ENST00000343765 PRO1854Q9UHT4 67 aa10.68□□□□□ -0.7
VIPAS39-202ENST00000343765 EIF4EBP3O60516 100 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-202ENST00000343765 PRSS2P07478 247 aa10.67□□□□□ -0.7
VIPAS39-202ENST00000343765 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-202ENST00000343765 LINC00694P0DN24 101 aa10.67□□□□□ -0.7
VIPAS39-202ENST00000343765 CRYBA4P53673 196 aa10.67□□□□□ -0.7
VIPAS39-202ENST00000343765 NPC2P61916 151 aa10.67□□□□□ -0.7
VIPAS39-202ENST00000343765 NDUFA12Q9UI09 145 aa10.67□□□□□ -0.7
VIPAS39-202ENST00000343765 J3QKU1 62 aa10.67□□□□□ -0.7
VIPAS39-202ENST00000343765 K7EQD1 137 aa10.67□□□□□ -0.7
VIPAS39-202ENST00000343765 NDUFA7O95182 113 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 SCGB1C2P0DMR2 95 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 UBE2D3P61077 147 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 UBE2D2P62837 147 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 VSIG2Q96IQ7 327 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 C16orf95Q9H693 158 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 CDKN2A-AS1Q9UH64 79 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 GAGE7O76087 117 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 RPL36AP83881 106 aaKnown RBP10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 RPL36ALQ969Q0 106 aaKnown RBP10.66□□□□□ -0.7
VIPAS39-202ENST00000343765 TCL1BO95988 128 aa10.65□□□□□ -0.7
VIPAS39-202ENST00000343765 INSL3P51460 131 aa10.65□□□□□ -0.7
VIPAS39-202ENST00000343765 TRRAPQ9Y4A5 3859 aa10.65□□□□□ -0.71
VIPAS39-202ENST00000343765 TRGV2A0A075B6R0 118 aa10.65□□□□□ -0.71
VIPAS39-202ENST00000343765 ADAMTSL4-AS1Q5T5F5 129 aa10.65□□□□□ -0.71
VIPAS39-202ENST00000343765 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.65□□□□□ -0.71
VIPAS39-202ENST00000343765 IGLV1-51P01701 117 aa10.64□□□□□ -0.71
VIPAS39-202ENST00000343765 COX6A2Q02221 97 aa10.64□□□□□ -0.71
VIPAS39-202ENST00000343765 TRAV4A0A0B4J268 109 aa10.64□□□□□ -0.71
VIPAS39-202ENST00000343765 SMCPP49901 116 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-202ENST00000343765 Q1RN00 199 aa10.64□□□□□ -0.71
VIPAS39-202ENST00000343765 NTM-AS1Q6ZSK4 140 aa10.64□□□□□ -0.71
VIPAS39-202ENST00000343765 LITAFQ99732 161 aa10.64□□□□□ -0.71
VIPAS39-202ENST00000343765 TRAV13-1A0A0B4J241 112 aa10.63□□□□□ -0.71
VIPAS39-202ENST00000343765 LOC100131303A0A0U1RQF7 123 aa10.63□□□□□ -0.71
VIPAS39-202ENST00000343765 LYRM7Q5U5X0 104 aa10.63□□□□□ -0.71
VIPAS39-202ENST00000343765 C19orf73Q9NVV2 129 aa10.63□□□□□ -0.71
VIPAS39-202ENST00000343765 IGHV3-33P01772 117 aa10.62□□□□□ -0.71
VIPAS39-202ENST00000343765 HILS1P60008 231 aa10.62□□□□□ -0.71
VIPAS39-202ENST00000343765 DAND5Q8N907 189 aa10.62□□□□□ -0.71
VIPAS39-202ENST00000343765 ERG28Q9UKR5 140 aa10.62□□□□□ -0.71
VIPAS39-202ENST00000343765 ATRQ13535 2644 aa10.61□□□□□ -0.71
VIPAS39-202ENST00000343765 PLAC8L1A1L4L8 177 aa10.61□□□□□ -0.71
VIPAS39-202ENST00000343765 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
VIPAS39-202ENST00000343765 TRBV10-1A0A0K0K1A3 114 aa10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 TMEM101Q96IK0 257 aa10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 A0A0B4J2C4 111 aa10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 DAZ2Q13117 558 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 DAZ4Q86SG3 579 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 ZNF625Q96I27 306 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 DAZ3Q9NR90 486 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 J3QR89 54 aa10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 CMC4P56277 68 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 LINC00242Q5T6M2 205 aa10.6□□□□□ -0.71
VIPAS39-202ENST00000343765 HIVEP1P15822 2718 aa10.59□□□□□ -0.71
VIPAS39-202ENST00000343765 A0A0U1RRA0 63 aa10.59□□□□□ -0.71
VIPAS39-202ENST00000343765 ZFAND6Q6FIF0 208 aa10.59□□□□□ -0.71
VIPAS39-202ENST00000343765 KRTAP10-3P60369 221 aa10.59□□□□□ -0.71
VIPAS39-202ENST00000343765 TRGV4A0A0C4DH28 118 aa10.58□□□□□ -0.72
VIPAS39-202ENST00000343765 PF4P02776 101 aa10.58□□□□□ -0.72
VIPAS39-202ENST00000343765 TIRAPP58753 221 aa10.58□□□□□ -0.72
VIPAS39-202ENST00000343765 MIAQ16674 131 aa10.58□□□□□ -0.72
VIPAS39-202ENST00000343765 TRBV20-1A0A075B6N2 111 aa10.58□□□□□ -0.72
VIPAS39-202ENST00000343765 UBE2L6O14933 153 aa10.58□□□□□ -0.72
VIPAS39-202ENST00000343765 CSNK1G2-AS1Q8NCQ2 148 aa10.58□□□□□ -0.72
VIPAS39-202ENST00000343765 C1QTNF4Q9BXJ3 329 aa10.58□□□□□ -0.72
VIPAS39-202ENST00000343765 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
VIPAS39-202ENST00000343765 NSD1Q96L73 2696 aaPredicted RBP10.57□□□□□ -0.72
VIPAS39-202ENST00000343765 HERVK_113P63121 156 aa10.57□□□□□ -0.72
VIPAS39-202ENST00000343765 SPANXDQ9BXN6 97 aa10.57□□□□□ -0.72
VIPAS39-202ENST00000343765 Q9H8V8 135 aa10.57□□□□□ -0.72
VIPAS39-202ENST00000343765 SPANXCQ9NY87 97 aa10.57□□□□□ -0.72
VIPAS39-202ENST00000343765 FLNBO75369 2602 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-202ENST00000343765 IGLV5-45A0A087WSX0 123 aa10.56□□□□□ -0.72
VIPAS39-202ENST00000343765 IGKV3OR2-268A0A0C4DH90 116 aa10.56□□□□□ -0.72
VIPAS39-202ENST00000343765 SPATA3Q8NHX4 192 aa10.56□□□□□ -0.72
VIPAS39-202ENST00000343765 TMEM243Q9BU79 118 aa10.56□□□□□ -0.72
VIPAS39-202ENST00000343765 GAGE12HA6NDE8 117 aa10.55□□□□□ -0.72
VIPAS39-202ENST00000343765 SBSPONQ8IVN8 264 aa10.55□□□□□ -0.72
VIPAS39-202ENST00000343765 CDC42SE2Q9NRR3 84 aa10.55□□□□□ -0.72
VIPAS39-202ENST00000343765 C9JAW5 83 aa10.55□□□□□ -0.72
VIPAS39-202ENST00000343765 DEFB130BP0DP73 79 aa10.55□□□□□ -0.72
VIPAS39-202ENST00000343765 DEFB130AP0DP74 79 aa10.55□□□□□ -0.72
VIPAS39-202ENST00000343765 FOXI1Q12951 378 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms