RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 TSHBP01222 138 aa14.29□□□□□ -0.12
CDK13-202ENST00000340829 JMJD1CQ15652 2540 aa14.28□□□□□ -0.12
CDK13-202ENST00000340829 LINC01006Q8NI28 216 aa14.28□□□□□ -0.12
CDK13-202ENST00000340829 CRYGDP07320 174 aa14.28□□□□□ -0.12
CDK13-202ENST00000340829 IGKV3D-7A0A0C4DH55 119 aa14.27□□□□□ -0.13
CDK13-202ENST00000340829 SPANXDQ9BXN6 97 aa14.27□□□□□ -0.13
CDK13-202ENST00000340829 RAI1Q7Z5J4 1906 aaPredicted RBP14.27□□□□□ -0.13
CDK13-202ENST00000340829 A8MZ25 164 aa14.27□□□□□ -0.13
CDK13-202ENST00000340829 POLR2KP53803 58 aaKnown RBP14.27□□□□□ -0.13
CDK13-202ENST00000340829 Q8N976 141 aa14.26□□□□□ -0.13
CDK13-202ENST00000340829 C9orf85Q96MD7 179 aa14.26□□□□□ -0.13
CDK13-202ENST00000340829 KRTAP10-9P60411 292 aa14.25□□□□□ -0.13
CDK13-202ENST00000340829 hADV29S1A0JD25 119 aa14.25□□□□□ -0.13
CDK13-202ENST00000340829 REG3AQ06141 175 aa14.25□□□□□ -0.13
CDK13-202ENST00000340829 B5MCH6 92 aa14.24□□□□□ -0.13
CDK13-202ENST00000340829 MRGPRG-AS1Q2M3A8 158 aa14.24□□□□□ -0.13
CDK13-202ENST00000340829 SPANXB1Q9NS25 103 aaPredicted RBP14.24□□□□□ -0.13
CDK13-202ENST00000340829 SPANXCQ9NY87 97 aa14.23□□□□□ -0.13
CDK13-202ENST00000340829 TRACP01848 142 aa14.23□□□□□ -0.13
CDK13-202ENST00000340829 SMIM9A6NGZ8 99 aa14.23□□□□□ -0.13
CDK13-202ENST00000340829 LYRM9A8MSI8 78 aa14.22□□□□□ -0.13
CDK13-202ENST00000340829 HIGD2BQ4VC39 106 aa14.22□□□□□ -0.13
CDK13-202ENST00000340829 TRBV6-8A0A0A6YYG3 113 aa14.22□□□□□ -0.13
CDK13-202ENST00000340829 PYGO1Q9Y3Y4 419 aa14.22□□□□□ -0.13
CDK13-202ENST00000340829 TRBV6-4A0A1B0GX49 114 aa14.21□□□□□ -0.13
CDK13-202ENST00000340829 PIK3CD-AS1Q5SR53 167 aa14.21□□□□□ -0.13
CDK13-202ENST00000340829 COL4A2P08572 1712 aa14.21□□□□□ -0.13
CDK13-202ENST00000340829 CHCHD10Q8WYQ3 142 aaPredicted RBP14.21□□□□□ -0.13
CDK13-202ENST00000340829 LINC00308Q8TCZ7 52 aa14.21□□□□□ -0.13
CDK13-202ENST00000340829 TIRAPP58753 221 aa14.21□□□□□ -0.14
CDK13-202ENST00000340829 PRRC2CQ9Y520 2896 aaKnown RBP14.2□□□□□ -0.14
CDK13-202ENST00000340829 ZFYVE26Q68DK2 2539 aa14.2□□□□□ -0.14
CDK13-202ENST00000340829 IGHV4-28A0A0C4DH34 117 aa14.2□□□□□ -0.14
CDK13-202ENST00000340829 FAM236AA0A1B0GUQ0 79 aa14.2□□□□□ -0.14
CDK13-202ENST00000340829 FAM236BA0A1B0GV22 79 aa14.2□□□□□ -0.14
CDK13-202ENST00000340829 LY6G6DO95868 133 aa14.19□□□□□ -0.14
CDK13-202ENST00000340829 DIRC1Q969H9 104 aa14.19□□□□□ -0.14
CDK13-202ENST00000340829 LOC100131303A0A0U1RQF7 123 aa14.19□□□□□ -0.14
CDK13-202ENST00000340829 H7C423 109 aa14.18□□□□□ -0.14
CDK13-202ENST00000340829 CRIP2P52943 208 aaPredicted RBP14.18□□□□□ -0.14
CDK13-202ENST00000340829 TEX49A0A1B0GTD5 131 aa14.18□□□□□ -0.14
CDK13-202ENST00000340829 TRIAP1O43715 76 aa14.18□□□□□ -0.14
CDK13-202ENST00000340829 C11orf45Q8TAV5 145 aa14.18□□□□□ -0.14
CDK13-202ENST00000340829 FUSP35637 526 aaKnown RBP eCLIP14.17□□□□□ -0.14
CDK13-202ENST00000340829 BBC3Q96PG8 261 aaPredicted RBP14.17□□□□□ -0.14
CDK13-202ENST00000340829 JMJD7-PLA2G4BH0Y9G9 81 aa14.17□□□□□ -0.14
CDK13-202ENST00000340829 FAM110AQ9BQ89 295 aa14.17□□□□□ -0.14
CDK13-202ENST00000340829 C14orf132Q9NPU4 83 aa14.17□□□□□ -0.14
CDK13-202ENST00000340829 UBE2D4Q9Y2X8 147 aa14.17□□□□□ -0.14
CDK13-202ENST00000340829 ADAMTS20P59510 1910 aa14.15□□□□□ -0.14
CDK13-202ENST00000340829 FN1P02751 2386 aaKnown RBP14.15□□□□□ -0.15
CDK13-202ENST00000340829 SS18L2Q9UHA2 77 aa14.14□□□□□ -0.15
CDK13-202ENST00000340829 HILS1P60008 231 aa14.14□□□□□ -0.15
CDK13-202ENST00000340829 RBM3P98179 157 aaKnown RBP14.13□□□□□ -0.15
CDK13-202ENST00000340829 ODF3L2Q3SX64 289 aa14.13□□□□□ -0.15
CDK13-202ENST00000340829 IGIPA6NJ69 53 aa14.13□□□□□ -0.15
CDK13-202ENST00000340829 A0A1B0GX51 115 aa14.13□□□□□ -0.15
CDK13-202ENST00000340829 TMEM256-PLSCR3K7ERE1 68 aa14.13□□□□□ -0.15
CDK13-202ENST00000340829 RBX1P62877 108 aa14.13□□□□□ -0.15
CDK13-202ENST00000340829 UFSP1Q6NVU6 142 aa14.13□□□□□ -0.15
CDK13-202ENST00000340829 TET2Q6N021 2002 aaPredicted RBP14.13□□□□□ -0.15
CDK13-202ENST00000340829 CITED1Q99966 193 aa14.12□□□□□ -0.15
CDK13-202ENST00000340829 IBA57-AS1B1ANH7 110 aa14.12□□□□□ -0.15
CDK13-202ENST00000340829 COX8CQ7Z4L0 72 aa14.12□□□□□ -0.15
CDK13-202ENST00000340829 LRRK2Q5S007 2527 aa14.12□□□□□ -0.15
CDK13-202ENST00000340829 MIFP14174 115 aa14.11□□□□□ -0.15
CDK13-202ENST00000340829 A0A096LNJ9 63 aa14.11□□□□□ -0.15
CDK13-202ENST00000340829 NREPQ16612 68 aa14.1□□□□□ -0.15
CDK13-202ENST00000340829 TRBV30A0A0K0K1B3 111 aa14.1□□□□□ -0.15
CDK13-202ENST00000340829 COX7BP24311 80 aa14.1□□□□□ -0.15
CDK13-202ENST00000340829 MT-ATP8P03928 68 aa14.09□□□□□ -0.15
CDK13-202ENST00000340829 SMR3AQ99954 134 aa14.09□□□□□ -0.15
CDK13-202ENST00000340829 DEFB131BA0A096LNP1 70 aa14.09□□□□□ -0.15
CDK13-202ENST00000340829 NDUFS5O43920 106 aa14.09□□□□□ -0.15
CDK13-202ENST00000340829 SLPIP03973 132 aa14.09□□□□□ -0.15
CDK13-202ENST00000340829 UBE2D1P51668 147 aa14.08□□□□□ -0.16
CDK13-202ENST00000340829 ZNF462Q96JM2 2506 aa14.08□□□□□ -0.16
CDK13-202ENST00000340829 ATOX1O00244 68 aa14.08□□□□□ -0.16
CDK13-202ENST00000340829 XAGE1AQ9HD64 81 aa14.08□□□□□ -0.16
CDK13-202ENST00000340829 H3BQ85 93 aa14.06□□□□□ -0.16
CDK13-202ENST00000340829 MRPS36P82909 103 aaKnown RBP14.06□□□□□ -0.16
CDK13-202ENST00000340829 POLQO75417 2590 aa14.06□□□□□ -0.16
CDK13-202ENST00000340829 UBE2D3P61077 147 aa14.05□□□□□ -0.16
CDK13-202ENST00000340829 UBE2D2P62837 147 aa14.05□□□□□ -0.16
CDK13-202ENST00000340829 LINC00526Q96FQ7 95 aa14.05□□□□□ -0.16
CDK13-202ENST00000340829 IGKV2-24A0A0C4DH68 120 aa14.05□□□□□ -0.16
CDK13-202ENST00000340829 BRI3O95415 125 aa14.05□□□□□ -0.16
CDK13-202ENST00000340829 TIMM17BO60830 172 aa14.04□□□□□ -0.16
CDK13-202ENST00000340829 LINC00643Q86TS7 51 aa14.04□□□□□ -0.16
CDK13-202ENST00000340829 NDUFA7O95182 113 aa14.04□□□□□ -0.16
CDK13-202ENST00000340829 POM121L12Q8N7R1 296 aa14.04□□□□□ -0.16
CDK13-202ENST00000340829 MTORP42345 2549 aa14.04□□□□□ -0.16
CDK13-202ENST00000340829 LINC00959A0A1B0GUT2 108 aa14.03□□□□□ -0.16
CDK13-202ENST00000340829 CHD7Q9P2D1 2997 aa14.03□□□□□ -0.16
CDK13-202ENST00000340829 IGLV4-69A0A075B6H9 119 aa14.03□□□□□ -0.16
CDK13-202ENST00000340829 UBE2AP49459 152 aa14.03□□□□□ -0.16
CDK13-202ENST00000340829 PKIGQ9Y2B9 76 aa14.03□□□□□ -0.16
CDK13-202ENST00000340829 PLA2G2AP14555 144 aa14.02□□□□□ -0.16
CDK13-202ENST00000340829 CDC42SE2Q9NRR3 84 aa14.02□□□□□ -0.16
CDK13-202ENST00000340829 PKD1L2Q7Z442 2459 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms