RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.75□□□□□ -0.53
SCARB1-202ENST00000339570 LITAFQ99732 161 aa11.75□□□□□ -0.53
SCARB1-202ENST00000339570 Q9H8V8 135 aa11.75□□□□□ -0.53
SCARB1-202ENST00000339570 SBSPONQ8IVN8 264 aa11.74□□□□□ -0.53
SCARB1-202ENST00000339570 VSIG2Q96IQ7 327 aa11.74□□□□□ -0.53
SCARB1-202ENST00000339570 DYNLRB2Q8TF09 96 aa11.73□□□□□ -0.53
SCARB1-202ENST00000339570 TRGV1A0A0A0MS02 117 aa11.73□□□□□ -0.53
SCARB1-202ENST00000339570 TRBV10-2A0A0K0K1G8 114 aa11.73□□□□□ -0.53
SCARB1-202ENST00000339570 NDUFV3P56181 108 aaKnown RBP11.72□□□□□ -0.53
SCARB1-202ENST00000339570 RS1O15537 224 aa11.72□□□□□ -0.53
SCARB1-202ENST00000339570 TOMM7Q9P0U1 55 aa11.72□□□□□ -0.53
SCARB1-202ENST00000339570 ODF3Q96PU9 254 aa11.71□□□□□ -0.53
SCARB1-202ENST00000339570 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.53
SCARB1-202ENST00000339570 UBE2D4Q9Y2X8 147 aa11.71□□□□□ -0.53
SCARB1-202ENST00000339570 GCN1Q92616 2671 aaKnown RBP11.71□□□□□ -0.53
SCARB1-202ENST00000339570 NHLRC4P0CG21 123 aaPredicted RBP11.71□□□□□ -0.53
SCARB1-202ENST00000339570 LINC00694P0DN24 101 aa11.71□□□□□ -0.53
SCARB1-202ENST00000339570 MRPS36P82909 103 aaKnown RBP11.71□□□□□ -0.53
SCARB1-202ENST00000339570 MIAQ16674 131 aa11.71□□□□□ -0.53
SCARB1-202ENST00000339570 SETXQ7Z333 2677 aaKnown RBP11.7□□□□□ -0.54
SCARB1-202ENST00000339570 TMEM101Q96IK0 257 aa11.7□□□□□ -0.54
SCARB1-202ENST00000339570 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
SCARB1-202ENST00000339570 IFITM1P13164 125 aa11.7□□□□□ -0.54
SCARB1-202ENST00000339570 GAGE5Q13069 117 aa11.7□□□□□ -0.54
SCARB1-202ENST00000339570 GAGE6Q13070 117 aa11.7□□□□□ -0.54
SCARB1-202ENST00000339570 GAGE12JA6NER3 117 aa11.69□□□□□ -0.54
SCARB1-202ENST00000339570 GAGE4Q13068 117 aa11.69□□□□□ -0.54
SCARB1-202ENST00000339570 PIK3CD-AS1Q5SR53 167 aa11.69□□□□□ -0.54
SCARB1-202ENST00000339570 CITED1Q99966 193 aa11.69□□□□□ -0.54
SCARB1-202ENST00000339570 TRBV30A0A0K0K1B3 111 aa11.68□□□□□ -0.54
SCARB1-202ENST00000339570 PRIMA1Q86XR5 153 aa11.68□□□□□ -0.54
SCARB1-202ENST00000339570 ZNF415Q09FC8 603 aa11.68□□□□□ -0.54
SCARB1-202ENST00000339570 Q8N2B8 174 aa11.68□□□□□ -0.54
SCARB1-202ENST00000339570 C11orf68Q9H3H3 251 aaKnown RBP11.68□□□□□ -0.54
SCARB1-202ENST00000339570 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
SCARB1-202ENST00000339570 NOTCH2Q04721 2471 aa11.67□□□□□ -0.54
SCARB1-202ENST00000339570 HIVEP2P31629 2446 aa11.67□□□□□ -0.54
SCARB1-202ENST00000339570 PLA2G2AP14555 144 aa11.66□□□□□ -0.54
SCARB1-202ENST00000339570 Q9HAA7 133 aa11.66□□□□□ -0.54
SCARB1-202ENST00000339570 FLNAP21333 2647 aaKnown RBP11.66□□□□□ -0.54
SCARB1-202ENST00000339570 TINCRA0A1B0GVN0 87 aa11.65□□□□□ -0.54
SCARB1-202ENST00000339570 PRB1P04280 392 aa11.65□□□□□ -0.54
SCARB1-202ENST00000339570 CIRBPQ14011 172 aaKnown RBP11.65□□□□□ -0.54
SCARB1-202ENST00000339570 GAGE7O76087 117 aa11.64□□□□□ -0.55
SCARB1-202ENST00000339570 BRI3O95415 125 aa11.64□□□□□ -0.55
SCARB1-202ENST00000339570 GAGE12FP0CL80 117 aa11.64□□□□□ -0.55
SCARB1-202ENST00000339570 GAGE12GP0CL81 117 aa11.64□□□□□ -0.55
SCARB1-202ENST00000339570 GAGE12IP0CL82 117 aa11.64□□□□□ -0.55
SCARB1-202ENST00000339570 CITED2Q99967 270 aaPredicted RBP11.64□□□□□ -0.55
SCARB1-202ENST00000339570 MAP6D1Q9H9H5 199 aa11.64□□□□□ -0.55
SCARB1-202ENST00000339570 Q6ZTI0 123 aa11.63□□□□□ -0.55
SCARB1-202ENST00000339570 VPREB3Q9UKI3 123 aa11.63□□□□□ -0.55
SCARB1-202ENST00000339570 PYGO1Q9Y3Y4 419 aa11.63□□□□□ -0.55
SCARB1-202ENST00000339570 SMIM20Q8N5G0 67 aa11.63□□□□□ -0.55
SCARB1-202ENST00000339570 LINC00308Q8TCZ7 52 aa11.63□□□□□ -0.55
SCARB1-202ENST00000339570 ZNF702PQ9H963 129 aa11.63□□□□□ -0.55
SCARB1-202ENST00000339570 SOSTDC1Q6X4U4 206 aa11.63□□□□□ -0.55
SCARB1-202ENST00000339570 NBPF19A0A087WUL8 3843 aa11.62□□□□□ -0.55
SCARB1-202ENST00000339570 LOC100131303A0A0U1RQF7 123 aa11.62□□□□□ -0.55
SCARB1-202ENST00000339570 LST1O00453 97 aa11.62□□□□□ -0.55
SCARB1-202ENST00000339570 LINC01356Q8N9X3 169 aa11.62□□□□□ -0.55
SCARB1-202ENST00000339570 WFDC10AQ9H1F0 79 aa11.62□□□□□ -0.55
SCARB1-202ENST00000339570 SPANXA1Q9NS26 97 aa11.62□□□□□ -0.55
SCARB1-202ENST00000339570 LINC00242Q5T6M2 205 aa11.61□□□□□ -0.55
SCARB1-202ENST00000339570 SPANXDQ9BXN6 97 aa11.61□□□□□ -0.55
SCARB1-202ENST00000339570 SPANXCQ9NY87 97 aa11.61□□□□□ -0.55
SCARB1-202ENST00000339570 YAE1D1Q9NRH1 226 aa11.61□□□□□ -0.55
SCARB1-202ENST00000339570 STHQ8IWL8 128 aa11.6□□□□□ -0.55
SCARB1-202ENST00000339570 NOP10Q9NPE3 64 aaKnown RBP11.6□□□□□ -0.55
SCARB1-202ENST00000339570 ITPR3Q14573 2671 aa11.6□□□□□ -0.55
SCARB1-202ENST00000339570 INSP01308 110 aa11.6□□□□□ -0.55
SCARB1-202ENST00000339570 RPL35AP18077 110 aaKnown RBP11.6□□□□□ -0.55
SCARB1-202ENST00000339570 FAM236AA0A1B0GUQ0 79 aa11.59□□□□□ -0.55
SCARB1-202ENST00000339570 FAM236BA0A1B0GV22 79 aa11.59□□□□□ -0.55
SCARB1-202ENST00000339570 TMEM89A2RUT3 159 aa11.59□□□□□ -0.55
SCARB1-202ENST00000339570 PFN2P35080 140 aa11.58□□□□□ -0.55
SCARB1-202ENST00000339570 GAGE2AQ6NT46 116 aa11.58□□□□□ -0.56
SCARB1-202ENST00000339570 UBE2L6O14933 153 aa11.58□□□□□ -0.56
SCARB1-202ENST00000339570 DAZ2Q13117 558 aaKnown RBP11.58□□□□□ -0.56
SCARB1-202ENST00000339570 DAZ4Q86SG3 579 aaKnown RBP11.58□□□□□ -0.56
SCARB1-202ENST00000339570 C11orf72Q8NBR9 251 aa11.58□□□□□ -0.56
SCARB1-202ENST00000339570 DAZ3Q9NR90 486 aaKnown RBP11.58□□□□□ -0.56
SCARB1-202ENST00000339570 KRTAP10-9P60411 292 aa11.57□□□□□ -0.56
SCARB1-202ENST00000339570 TRGV2A0A075B6R0 118 aa11.57□□□□□ -0.56
SCARB1-202ENST00000339570 APCP25054 2843 aa11.57□□□□□ -0.56
SCARB1-202ENST00000339570 H3BT86 120 aa11.57□□□□□ -0.56
SCARB1-202ENST00000339570 BAALC-AS2P0C853 105 aa11.57□□□□□ -0.56
SCARB1-202ENST00000339570 FAM218AQ96MZ4 157 aa11.57□□□□□ -0.56
SCARB1-202ENST00000339570 NDUFA1O15239 70 aa11.56□□□□□ -0.56
SCARB1-202ENST00000339570 ATP5G1P05496 136 aa11.56□□□□□ -0.56
SCARB1-202ENST00000339570 NTM-AS1Q6ZSK4 140 aa11.56□□□□□ -0.56
SCARB1-202ENST00000339570 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
SCARB1-202ENST00000339570 RPL36AP83881 106 aaKnown RBP11.56□□□□□ -0.56
SCARB1-202ENST00000339570 RPL36ALQ969Q0 106 aaKnown RBP11.56□□□□□ -0.56
SCARB1-202ENST00000339570 LINC00158P58513 81 aa11.55□□□□□ -0.56
SCARB1-202ENST00000339570 CLPSL2Q6UWE3 100 aa11.55□□□□□ -0.56
SCARB1-202ENST00000339570 OR13C6PQ8NH95 151 aa11.55□□□□□ -0.56
SCARB1-202ENST00000339570 PEMTQ9UBM1 199 aa11.55□□□□□ -0.56
SCARB1-202ENST00000339570 HERVK_113P63121 156 aa11.54□□□□□ -0.56
SCARB1-202ENST00000339570 Q96MF0 132 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms