RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 SMIM4Q8WVI0 70 aa0.6□□□□□ -2.31
XRCC4-202ENST00000338635 TRGV9Q99603 122 aa0.6□□□□□ -2.31
XRCC4-202ENST00000338635 BPESC1Q9GZL8 116 aa0.6□□□□□ -2.31
XRCC4-202ENST00000338635 CDC42SE2Q9NRR3 84 aa0.6□□□□□ -2.31
XRCC4-202ENST00000338635 KNTC1P50748 2209 aa0.6□□□□□ -2.31
XRCC4-202ENST00000338635 BAZ1AQ9NRL2 1556 aaPredicted RBP0.6□□□□□ -2.31
XRCC4-202ENST00000338635 CNTRLQ7Z7A1 2325 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 MRC1P22897 1456 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 TANC1Q9C0D5 1861 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 SYNE2Q8WXH0 6885 aaKnown RBP0.59□□□□□ -2.31
XRCC4-202ENST00000338635 ZDBF2Q9HCK1 2354 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 UQCR11O14957 56 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 SPINT3P49223 89 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 C9orf62Q8N4C0 152 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 NXT2Q9NPJ8 142 aaKnown RBP0.59□□□□□ -2.31
XRCC4-202ENST00000338635 LINC01558Q9Y6Z2 57 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 ARL2-SNX15V9GYD0 113 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 SHROOM2Q13796 1616 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 SCRIBQ14160 1630 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 TENM3Q9P273 2699 aa0.59□□□□□ -2.31
XRCC4-202ENST00000338635 RB1CC1Q8TDY2 1594 aa0.59□□□□□ -2.32
XRCC4-202ENST00000338635 PRDM15P57071 1507 aaPredicted RBP0.59□□□□□ -2.32
XRCC4-202ENST00000338635 PRDM2Q13029 1718 aa0.59□□□□□ -2.32
XRCC4-202ENST00000338635 ANKRD26Q9UPS8 1709 aa0.59□□□□□ -2.32
XRCC4-202ENST00000338635 HELZ2Q9BYK8 2649 aaKnown RBP0.59□□□□□ -2.32
XRCC4-202ENST00000338635 UQCRHLA0A096LP55 91 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 GVQW2A0A096LPI5 108 aaPredicted RBP0.58□□□□□ -2.32
XRCC4-202ENST00000338635 A0A0G2JND7 137 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 TRBV7-7A0A0K0K1E9 115 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 SAA2P0DJI9 122 aaPredicted RBP0.58□□□□□ -2.32
XRCC4-202ENST00000338635 ZNF137PP52743 207 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 COX17Q14061 63 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 PMCHL1Q16048 86 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 SPINK9Q5DT21 86 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 PYY3Q5JQD4 70 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 CFAP126Q5VTH2 177 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 SFTA2Q6UW10 78 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 Q6ZRX8 168 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 NPVFQ9HCQ7 196 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 CACFD1Q9UGQ2 172 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 LOC285556D6RIA3 1793 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 COL6A6A6NMZ7 2263 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 TET3O43151 1660 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 TOPAZ1Q8N9V7 1692 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 SIPA1L3O60292 1781 aaPredicted RBP0.58□□□□□ -2.32
XRCC4-202ENST00000338635 CDK13Q14004 1512 aaKnown RBP0.58□□□□□ -2.32
XRCC4-202ENST00000338635 F5P12259 2224 aa0.58□□□□□ -2.32
XRCC4-202ENST00000338635 SYS1-DBNDD2H3BUS1 97 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 PIN1P1O15428 100 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 MGPP08493 103 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 GCHFRP30047 84 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 PRR15LQ9BU68 103 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 PLEKHH2Q8IVE3 1493 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 MLH3Q9UHC1 1453 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 RAPGEF2Q9Y4G8 1499 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 KMT2DO14686 5537 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 MAP2P11137 1827 aaKnown RBP0.57□□□□□ -2.32
XRCC4-202ENST00000338635 LAMC3Q9Y6N6 1575 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 ZMYM4Q5VZL5 1548 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 CHD1O14646 1710 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 ROS1P08922 2347 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 SHANK2Q9UPX8 1470 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 TRBV25-1A0A075B6N4 114 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 A0A1B0GWA3 101 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 H7BZZ5 65 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 UQCRHP07919 91 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 FAM223AQ8IWN6 122 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 PRO1933Q9H354 126 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 PROK2Q9HC23 129 aa0.57□□□□□ -2.32
XRCC4-202ENST00000338635 KMT2BQ9UMN6 2715 aaPredicted RBP0.56□□□□□ -2.32
XRCC4-202ENST00000338635 KIAA1551Q9HCM1 1747 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 MARF1Q9Y4F3 1742 aaKnown RBP0.56□□□□□ -2.32
XRCC4-202ENST00000338635 HMGXB3Q12766 1538 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 MYOM1P52179 1685 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 LAMA4Q16363 1823 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 FAM223BA6NKX1 122 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 ZNF815PA8K554 130 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 M0R3E3 92 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 BCE1O60756 84 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 SMIM11AP58511 58 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 PSMG4Q5JS54 123 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 LCN9Q8WX39 176 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 C20orf78Q9BR46 151 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 DIP2CQ9Y2E4 1556 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 MYO7AQ13402 2215 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 IFT172Q9UG01 1749 aa0.56□□□□□ -2.32
XRCC4-202ENST00000338635 EHBP1L1Q8N3D4 1523 aa0.55□□□□□ -2.32
XRCC4-202ENST00000338635 KDM5AP29375 1690 aaKnown RBP0.55□□□□□ -2.32
XRCC4-202ENST00000338635 TOP2BQ02880 1626 aa0.55□□□□□ -2.32
XRCC4-202ENST00000338635 K7EP34 96 aa0.55□□□□□ -2.32
XRCC4-202ENST00000338635 CYB5AP00167 134 aa0.55□□□□□ -2.32
XRCC4-202ENST00000338635 KRTAP10-4P60372 401 aaPredicted RBP0.55□□□□□ -2.32
XRCC4-202ENST00000338635 ZNF720Q7Z2F6 126 aa0.55□□□□□ -2.32
XRCC4-202ENST00000338635 S100A16Q96FQ6 103 aaKnown RBP0.55□□□□□ -2.32
XRCC4-202ENST00000338635 SPRR4Q96PI1 79 aa0.55□□□□□ -2.32
XRCC4-202ENST00000338635 RABAC1Q9UI14 185 aa0.55□□□□□ -2.32
XRCC4-202ENST00000338635 ARHGEF12Q9NZN5 1544 aa0.55□□□□□ -2.32
XRCC4-202ENST00000338635 PLIN4Q96Q06 1357 aa0.55□□□□□ -2.32
XRCC4-202ENST00000338635 CCDC18Q5T9S5 1454 aa0.55□□□□□ -2.32
XRCC4-202ENST00000338635 ASH1LQ9NR48 2969 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms