RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 K7EP34 96 aa11.07□□□□□ -0.64
C9orf47-201ENST00000334490 PPDPFLQ8WWR9 84 aa11.07□□□□□ -0.64
C9orf47-201ENST00000334490 ORMDL1Q9P0S3 153 aa11.07□□□□□ -0.64
C9orf47-201ENST00000334490 COL4A2P08572 1712 aa11.07□□□□□ -0.64
C9orf47-201ENST00000334490 RBMY1FQ15415 496 aaKnown RBP11.06□□□□□ -0.64
C9orf47-201ENST00000334490 EXPH5Q8NEV8 1989 aa11.06□□□□□ -0.64
C9orf47-201ENST00000334490 F8W1H4 67 aa11.06□□□□□ -0.64
C9orf47-201ENST00000334490 BAALC-AS2P0C853 105 aa11.06□□□□□ -0.64
C9orf47-201ENST00000334490 H0YGX0 51 aa11.05□□□□□ -0.64
C9orf47-201ENST00000334490 IGLV1-51P01701 117 aa11.05□□□□□ -0.64
C9orf47-201ENST00000334490 KPRPQ5T749 579 aaPredicted RBP11.05□□□□□ -0.64
C9orf47-201ENST00000334490 C15orf53Q8NAA6 179 aa11.05□□□□□ -0.64
C9orf47-201ENST00000334490 C16orf95Q9H693 158 aa11.04□□□□□ -0.64
C9orf47-201ENST00000334490 CDKN2A-AS1Q9UH64 79 aa11.04□□□□□ -0.64
C9orf47-201ENST00000334490 ADAMTS20P59510 1910 aa11.04□□□□□ -0.64
C9orf47-201ENST00000334490 NTN5Q8WTR8 489 aaPredicted RBP11.04□□□□□ -0.64
C9orf47-201ENST00000334490 H7C423 109 aa11.03□□□□□ -0.64
C9orf47-201ENST00000334490 IGLV2-18A0A075B6J9 118 aa11.03□□□□□ -0.64
C9orf47-201ENST00000334490 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.65
C9orf47-201ENST00000334490 FXYD2P54710 66 aa11.02□□□□□ -0.65
C9orf47-201ENST00000334490 RNF185Q96GF1 192 aa11.02□□□□□ -0.65
C9orf47-201ENST00000334490 K7EP13 123 aa11.02□□□□□ -0.65
C9orf47-201ENST00000334490 RBX1P62877 108 aa11.01□□□□□ -0.65
C9orf47-201ENST00000334490 LOC100131303A0A0U1RQF7 123 aa11.01□□□□□ -0.65
C9orf47-201ENST00000334490 UFSP1Q6NVU6 142 aa11.01□□□□□ -0.65
C9orf47-201ENST00000334490 A0A0J9YWU9 116 aa11.01□□□□□ -0.65
C9orf47-201ENST00000334490 hADV29S1A0JD25 119 aa11.01□□□□□ -0.65
C9orf47-201ENST00000334490 HIGD1BQ9P298 99 aa11.01□□□□□ -0.65
C9orf47-201ENST00000334490 ZNF580Q9UK33 172 aa11.01□□□□□ -0.65
C9orf47-201ENST00000334490 NANOS2P60321 138 aaKnown RBP11□□□□□ -0.65
C9orf47-201ENST00000334490 SPATA12Q7Z6I5 190 aa11□□□□□ -0.65
C9orf47-201ENST00000334490 TRBV27A0A0K0K1C4 114 aa11□□□□□ -0.65
C9orf47-201ENST00000334490 C9orf85Q96MD7 179 aa11□□□□□ -0.65
C9orf47-201ENST00000334490 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
C9orf47-201ENST00000334490 BRI3O95415 125 aa10.99□□□□□ -0.65
C9orf47-201ENST00000334490 DIRC1Q969H9 104 aa10.99□□□□□ -0.65
C9orf47-201ENST00000334490 MRPS12O15235 138 aaKnown RBP10.99□□□□□ -0.65
C9orf47-201ENST00000334490 TRBV6-5A0A0K0K1A5 114 aa10.99□□□□□ -0.65
C9orf47-201ENST00000334490 FUSP35637 526 aaKnown RBP eCLIP10.99□□□□□ -0.65
C9orf47-201ENST00000334490 NFE4Q86UQ8 179 aa10.99□□□□□ -0.65
C9orf47-201ENST00000334490 TNRC6BQ9UPQ9 1833 aaKnown RBP10.98□□□□□ -0.65
C9orf47-201ENST00000334490 M0R2N4 97 aa10.98□□□□□ -0.65
C9orf47-201ENST00000334490 CLUHP3Q96NS8 147 aa10.98□□□□□ -0.65
C9orf47-201ENST00000334490 RETNQ9HD89 108 aa10.97□□□□□ -0.65
C9orf47-201ENST00000334490 LECT2O14960 151 aa10.97□□□□□ -0.65
C9orf47-201ENST00000334490 ZNF22P17026 224 aaPredicted RBP10.97□□□□□ -0.65
C9orf47-201ENST00000334490 CRYBA4P53673 196 aa10.97□□□□□ -0.65
C9orf47-201ENST00000334490 LELP1Q5T871 98 aa10.96□□□□□ -0.66
C9orf47-201ENST00000334490 NPSP0C0P6 89 aa10.96□□□□□ -0.66
C9orf47-201ENST00000334490 MIAQ16674 131 aa10.96□□□□□ -0.66
C9orf47-201ENST00000334490 MRGPRG-AS1Q2M3A8 158 aa10.96□□□□□ -0.66
C9orf47-201ENST00000334490 A0A0J9YXY3 114 aa10.95□□□□□ -0.66
C9orf47-201ENST00000334490 LY6G6CO95867 125 aa10.95□□□□□ -0.66
C9orf47-201ENST00000334490 U3KQK5 164 aa10.95□□□□□ -0.66
C9orf47-201ENST00000334490 TSHBP01222 138 aa10.94□□□□□ -0.66
C9orf47-201ENST00000334490 C4orf48Q5BLP8 95 aa10.94□□□□□ -0.66
C9orf47-201ENST00000334490 HIGD2AQ9BW72 106 aa10.94□□□□□ -0.66
C9orf47-201ENST00000334490 SYCNQ0VAF6 134 aa10.94□□□□□ -0.66
C9orf47-201ENST00000334490 NRACQ8N912 160 aa10.94□□□□□ -0.66
C9orf47-201ENST00000334490 XAGE1AQ9HD64 81 aa10.93□□□□□ -0.66
C9orf47-201ENST00000334490 ANKRD29Q8N6D5 301 aa10.93□□□□□ -0.66
C9orf47-201ENST00000334490 SPANXCQ9NY87 97 aa10.93□□□□□ -0.66
C9orf47-201ENST00000334490 POLR2KP53803 58 aaKnown RBP10.92□□□□□ -0.66
C9orf47-201ENST00000334490 LINC01620Q4KN68 170 aa10.92□□□□□ -0.66
C9orf47-201ENST00000334490 PYGO1Q9Y3Y4 419 aa10.92□□□□□ -0.66
C9orf47-201ENST00000334490 PTPRBP23467 1997 aa10.91□□□□□ -0.66
C9orf47-201ENST00000334490 C1orf158Q8N1D5 194 aa10.91□□□□□ -0.66
C9orf47-201ENST00000334490 A0A087WZ39 114 aa10.91□□□□□ -0.66
C9orf47-201ENST00000334490 PIK3CD-AS1Q5SR53 167 aa10.91□□□□□ -0.66
C9orf47-201ENST00000334490 GAS8-AS1O95177 125 aa10.91□□□□□ -0.66
C9orf47-201ENST00000334490 COX7BP24311 80 aa10.91□□□□□ -0.66
C9orf47-201ENST00000334490 LINC00526Q96FQ7 95 aa10.91□□□□□ -0.66
C9orf47-201ENST00000334490 CHD7Q9P2D1 2997 aa10.9□□□□□ -0.66
C9orf47-201ENST00000334490 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
C9orf47-201ENST00000334490 NDUFS5O43920 106 aa10.9□□□□□ -0.66
C9orf47-201ENST00000334490 CD164L2Q6UWJ8 174 aa10.9□□□□□ -0.66
C9orf47-201ENST00000334490 CLEC2BQ92478 149 aa10.9□□□□□ -0.66
C9orf47-201ENST00000334490 TRACP01848 142 aa10.9□□□□□ -0.66
C9orf47-201ENST00000334490 TET2Q6N021 2002 aaPredicted RBP10.9□□□□□ -0.67
C9orf47-201ENST00000334490 UBE2D3P61077 147 aa10.9□□□□□ -0.67
C9orf47-201ENST00000334490 UBE2D2P62837 147 aa10.9□□□□□ -0.67
C9orf47-201ENST00000334490 B9D2Q9BPU9 175 aa10.9□□□□□ -0.67
C9orf47-201ENST00000334490 IBA57-AS1B1ANH7 110 aa10.89□□□□□ -0.67
C9orf47-201ENST00000334490 CNFNQ9BYD5 112 aa10.89□□□□□ -0.67
C9orf47-201ENST00000334490 RANBP2P49792 3224 aaKnown RBP10.88□□□□□ -0.67
C9orf47-201ENST00000334490 LINC00959A0A1B0GUT2 108 aa10.88□□□□□ -0.67
C9orf47-201ENST00000334490 LRCOL1A6NCL2 159 aa10.87□□□□□ -0.67
C9orf47-201ENST00000334490 C9orf153Q5TBE3 101 aa10.87□□□□□ -0.67
C9orf47-201ENST00000334490 UBE2D4Q9Y2X8 147 aa10.87□□□□□ -0.67
C9orf47-201ENST00000334490 PCNTO95613 3336 aa10.87□□□□□ -0.67
C9orf47-201ENST00000334490 FAM19A5Q7Z5A7 132 aaPredicted RBP10.87□□□□□ -0.67
C9orf47-201ENST00000334490 H3BQ85 93 aa10.87□□□□□ -0.67
C9orf47-201ENST00000334490 Q6ZTC4 211 aa10.87□□□□□ -0.67
C9orf47-201ENST00000334490 A8MZ25 164 aa10.86□□□□□ -0.67
C9orf47-201ENST00000334490 FAM19A1Q7Z5A9 133 aa10.85□□□□□ -0.67
C9orf47-201ENST00000334490 Q8N2B8 174 aa10.85□□□□□ -0.67
C9orf47-201ENST00000334490 NDUFB1O75438 58 aa10.85□□□□□ -0.67
C9orf47-201ENST00000334490 NREPQ16612 68 aa10.85□□□□□ -0.67
C9orf47-201ENST00000334490 YPEL4Q96NS1 127 aa10.84□□□□□ -0.67
C9orf47-201ENST00000334490 IGKV2D-26A0A0A0MRZ7 120 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 244.4 ms