RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 SPANXB1Q9NS25 103 aaPredicted RBP13.58□□□□□ -0.24
RFTN1-201ENST00000334133 A0A0J9YXY3 114 aa13.57□□□□□ -0.24
RFTN1-201ENST00000334133 J3QKU1 62 aa13.57□□□□□ -0.24
RFTN1-201ENST00000334133 RNASE1P07998 156 aaKnown RBP13.57□□□□□ -0.24
RFTN1-201ENST00000334133 INSL3P51460 131 aa13.57□□□□□ -0.24
RFTN1-201ENST00000334133 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.57□□□□□ -0.24
RFTN1-201ENST00000334133 GAGE7O76087 117 aa13.56□□□□□ -0.24
RFTN1-201ENST00000334133 GAGE12FP0CL80 117 aa13.56□□□□□ -0.24
RFTN1-201ENST00000334133 GAGE12GP0CL81 117 aa13.56□□□□□ -0.24
RFTN1-201ENST00000334133 GAGE12IP0CL82 117 aa13.56□□□□□ -0.24
RFTN1-201ENST00000334133 KMT2BQ9UMN6 2715 aaPredicted RBP13.56□□□□□ -0.24
RFTN1-201ENST00000334133 F8W1H4 67 aa13.56□□□□□ -0.24
RFTN1-201ENST00000334133 PIK3CD-AS1Q5SR53 167 aa13.56□□□□□ -0.24
RFTN1-201ENST00000334133 GEMIN7Q9H840 131 aaKnown RBP13.56□□□□□ -0.24
RFTN1-201ENST00000334133 CDKN2A-AS1Q9UH64 79 aa13.56□□□□□ -0.24
RFTN1-201ENST00000334133 PRO0461Q9UI25 63 aa13.56□□□□□ -0.24
RFTN1-201ENST00000334133 LOC100131303A0A0U1RQF7 123 aa13.55□□□□□ -0.24
RFTN1-201ENST00000334133 ADAMTSL4-AS1Q5T5F5 129 aa13.55□□□□□ -0.24
RFTN1-201ENST00000334133 SPANXA1Q9NS26 97 aa13.55□□□□□ -0.24
RFTN1-201ENST00000334133 COX6A2Q02221 97 aa13.55□□□□□ -0.24
RFTN1-201ENST00000334133 NDUFA12Q9UI09 145 aa13.55□□□□□ -0.24
RFTN1-201ENST00000334133 DAND5Q8N907 189 aa13.54□□□□□ -0.24
RFTN1-201ENST00000334133 PTH2Q96A98 100 aa13.54□□□□□ -0.24
RFTN1-201ENST00000334133 SCGB1C2P0DMR2 95 aa13.54□□□□□ -0.24
RFTN1-201ENST00000334133 NTM-AS1Q6ZSK4 140 aa13.54□□□□□ -0.24
RFTN1-201ENST00000334133 PRO1854Q9UHT4 67 aa13.54□□□□□ -0.24
RFTN1-201ENST00000334133 TMEM263Q8WUH6 116 aaKnown RBP13.53□□□□□ -0.24
RFTN1-201ENST00000334133 DNAJC30Q96LL9 226 aa13.53□□□□□ -0.24
RFTN1-201ENST00000334133 TRGV2A0A075B6R0 118 aa13.53□□□□□ -0.24
RFTN1-201ENST00000334133 TRAV13-1A0A0B4J241 112 aa13.53□□□□□ -0.24
RFTN1-201ENST00000334133 IGHV1-58A0A0C4DH39 117 aa13.53□□□□□ -0.24
RFTN1-201ENST00000334133 IL17DQ8TAD2 202 aa13.53□□□□□ -0.24
RFTN1-201ENST00000334133 TENM1Q9UKZ4 2725 aa13.53□□□□□ -0.24
RFTN1-201ENST00000334133 TCL1BO95988 128 aa13.53□□□□□ -0.24
RFTN1-201ENST00000334133 A0A0U1RRA0 63 aa13.52□□□□□ -0.24
RFTN1-201ENST00000334133 SMCPP49901 116 aaPredicted RBP13.52□□□□□ -0.24
RFTN1-201ENST00000334133 ZNF625Q96I27 306 aaPredicted RBP13.52□□□□□ -0.24
RFTN1-201ENST00000334133 VSIG2Q96IQ7 327 aa13.52□□□□□ -0.24
RFTN1-201ENST00000334133 TINCRA0A1B0GVN0 87 aa13.52□□□□□ -0.25
RFTN1-201ENST00000334133 K7EQD1 137 aa13.52□□□□□ -0.25
RFTN1-201ENST00000334133 IGLV1-51P01701 117 aa13.51□□□□□ -0.25
RFTN1-201ENST00000334133 RPL36AP83881 106 aaKnown RBP13.51□□□□□ -0.25
RFTN1-201ENST00000334133 RPL36ALQ969Q0 106 aaKnown RBP13.51□□□□□ -0.25
RFTN1-201ENST00000334133 CLUHP3Q96NS8 147 aa13.51□□□□□ -0.25
RFTN1-201ENST00000334133 C19orf73Q9NVV2 129 aa13.51□□□□□ -0.25
RFTN1-201ENST00000334133 TMEM238C9JI98 176 aa13.5□□□□□ -0.25
RFTN1-201ENST00000334133 UBE2D3P61077 147 aa13.5□□□□□ -0.25
RFTN1-201ENST00000334133 UBE2D2P62837 147 aa13.5□□□□□ -0.25
RFTN1-201ENST00000334133 C16orf95Q9H693 158 aa13.5□□□□□ -0.25
RFTN1-201ENST00000334133 KRTAP10-3P60369 221 aa13.5□□□□□ -0.25
RFTN1-201ENST00000334133 Q1RN00 199 aa13.5□□□□□ -0.25
RFTN1-201ENST00000334133 LITAFQ99732 161 aa13.5□□□□□ -0.25
RFTN1-201ENST00000334133 PLAC8L1A1L4L8 177 aa13.49□□□□□ -0.25
RFTN1-201ENST00000334133 HILS1P60008 231 aa13.49□□□□□ -0.25
RFTN1-201ENST00000334133 IGKV3OR2-268A0A0C4DH90 116 aa13.47□□□□□ -0.25
RFTN1-201ENST00000334133 TRAV4A0A0B4J268 109 aa13.47□□□□□ -0.25
RFTN1-201ENST00000334133 IGHV3-33P01772 117 aa13.47□□□□□ -0.25
RFTN1-201ENST00000334133 CRYBA4P53673 196 aa13.47□□□□□ -0.25
RFTN1-201ENST00000334133 SPATA3Q8NHX4 192 aa13.47□□□□□ -0.25
RFTN1-201ENST00000334133 TMEM101Q96IK0 257 aa13.47□□□□□ -0.25
RFTN1-201ENST00000334133 LINC00242Q5T6M2 205 aa13.47□□□□□ -0.25
RFTN1-201ENST00000334133 ATRQ13535 2644 aa13.46□□□□□ -0.25
RFTN1-201ENST00000334133 ERG28Q9UKR5 140 aa13.46□□□□□ -0.25
RFTN1-201ENST00000334133 TRGV4A0A0C4DH28 118 aa13.44□□□□□ -0.26
RFTN1-201ENST00000334133 CSNK1G2-AS1Q8NCQ2 148 aa13.44□□□□□ -0.26
RFTN1-201ENST00000334133 PF4P02776 101 aa13.44□□□□□ -0.26
RFTN1-201ENST00000334133 DEFB130BP0DP73 79 aa13.44□□□□□ -0.26
RFTN1-201ENST00000334133 DEFB130AP0DP74 79 aa13.44□□□□□ -0.26
RFTN1-201ENST00000334133 GTSF1LQ9H1H1 148 aa13.44□□□□□ -0.26
RFTN1-201ENST00000334133 C16orf74Q96GX8 76 aa13.43□□□□□ -0.26
RFTN1-201ENST00000334133 NSD1Q96L73 2696 aaPredicted RBP13.43□□□□□ -0.26
RFTN1-201ENST00000334133 DAZ2Q13117 558 aaKnown RBP13.43□□□□□ -0.26
RFTN1-201ENST00000334133 LY6G6DO95868 133 aa13.42□□□□□ -0.26
RFTN1-201ENST00000334133 ZFAND6Q6FIF0 208 aa13.42□□□□□ -0.26
RFTN1-201ENST00000334133 DAZ4Q86SG3 579 aaKnown RBP13.42□□□□□ -0.26
RFTN1-201ENST00000334133 Q9H8V8 135 aa13.42□□□□□ -0.26
RFTN1-201ENST00000334133 DAZ3Q9NR90 486 aaKnown RBP13.42□□□□□ -0.26
RFTN1-201ENST00000334133 TRBV10-1A0A0K0K1A3 114 aa13.41□□□□□ -0.26
RFTN1-201ENST00000334133 UBE2L6O14933 153 aa13.41□□□□□ -0.26
RFTN1-201ENST00000334133 GAGE6Q13070 117 aa13.41□□□□□ -0.26
RFTN1-201ENST00000334133 A0A0B4J2C4 111 aa13.4□□□□□ -0.26
RFTN1-201ENST00000334133 MIAQ16674 131 aa13.4□□□□□ -0.26
RFTN1-201ENST00000334133 LYRM7Q5U5X0 104 aa13.4□□□□□ -0.26
RFTN1-201ENST00000334133 CDC42SE2Q9NRR3 84 aa13.4□□□□□ -0.26
RFTN1-201ENST00000334133 C9JAW5 83 aa13.39□□□□□ -0.27
RFTN1-201ENST00000334133 TIRAPP58753 221 aa13.39□□□□□ -0.27
RFTN1-201ENST00000334133 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.39□□□□□ -0.27
RFTN1-201ENST00000334133 CRLF1O75462 422 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 SBSPONQ8IVN8 264 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 LINC00482Q8N8I6 264 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 TMEM243Q9BU79 118 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 GAGE12HA6NDE8 117 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 J3QR89 54 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 TRIAP1O43715 76 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 HERVK_113P63121 156 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 FOXI1Q12951 378 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 C1QTNF4Q9BXJ3 329 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 TRRAPQ9Y4A5 3859 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 HIVEP1P15822 2718 aa13.38□□□□□ -0.27
RFTN1-201ENST00000334133 SMIM1B2RUZ4 78 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms