RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 A0A0J9YXV3 536 aa6.4□□□□□ -1.39
SIMC1-201ENST00000332772 IGKV2-29A2NJV5 120 aaPredicted RBP6.4□□□□□ -1.39
SIMC1-201ENST00000332772 C9orf118A6NHY6 69 aa6.4□□□□□ -1.39
SIMC1-201ENST00000332772 A8MZ25 164 aa6.4□□□□□ -1.39
SIMC1-201ENST00000332772 MIFP14174 115 aa6.4□□□□□ -1.39
SIMC1-201ENST00000332772 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.39
SIMC1-201ENST00000332772 UBE2D1P51668 147 aa6.4□□□□□ -1.39
SIMC1-201ENST00000332772 UBE2V1Q13404 147 aa6.4□□□□□ -1.39
SIMC1-201ENST00000332772 NTM-AS1Q6ZSK4 140 aa6.4□□□□□ -1.39
SIMC1-201ENST00000332772 HIST1H4GQ99525 98 aa6.4□□□□□ -1.39
SIMC1-201ENST00000332772 TMEM243Q9BU79 118 aa6.4□□□□□ -1.39
SIMC1-201ENST00000332772 JMJD1CQ15652 2540 aa6.4□□□□□ -1.39
SIMC1-201ENST00000332772 TMEM238LA0A1B0GVL6 79 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 A0A1B0GWB2 263 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 GAGE12JA6NER3 117 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 A6NJY4 79 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 GCSHP23434 173 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 GAGE4Q13068 117 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 GAGE5Q13069 117 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 GAGE13Q4V321 117 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 SHISA2Q6UWI4 295 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 SCGB1D4Q6XE38 83 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 OR5A1Q8NGJ0 315 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 SPATA3Q8NHX4 192 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 IGHV1-58A0A0C4DH39 117 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 A0A0J9YY99 117 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 PTTG1IPP53801 180 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 EMP1P54849 157 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 HERVK_113P63121 156 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 Q6ZUT4 128 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 TMEM101Q96IK0 257 aa6.39□□□□□ -1.39
SIMC1-201ENST00000332772 TEX48A0A1B0GUV7 120 aa6.38□□□□□ -1.39
SIMC1-201ENST00000332772 FXYD2P54710 66 aa6.38□□□□□ -1.39
SIMC1-201ENST00000332772 RNF183Q96D59 192 aa6.38□□□□□ -1.39
SIMC1-201ENST00000332772 GEMIN7Q9H840 131 aaKnown RBP6.38□□□□□ -1.39
SIMC1-201ENST00000332772 CDC42SE2Q9NRR3 84 aa6.38□□□□□ -1.39
SIMC1-201ENST00000332772 PRO0255Q9UI72 69 aa6.38□□□□□ -1.39
SIMC1-201ENST00000332772 TEP1Q99973 2627 aaKnown RBP6.37□□□□□ -1.39
SIMC1-201ENST00000332772 TRBV6-8A0A0A6YYG3 113 aa6.37□□□□□ -1.39
SIMC1-201ENST00000332772 UBE2L6O14933 153 aa6.37□□□□□ -1.39
SIMC1-201ENST00000332772 EGFEM1PQ0D2K5 195 aa6.37□□□□□ -1.39
SIMC1-201ENST00000332772 KRTAP24-1Q3LI83 254 aa6.37□□□□□ -1.39
SIMC1-201ENST00000332772 CEMP1Q6PRD7 247 aaPredicted RBP6.37□□□□□ -1.39
SIMC1-201ENST00000332772 F8P00451 2351 aa6.37□□□□□ -1.39
SIMC1-201ENST00000332772 IGHV3-30-3P0DP02 117 aa6.36□□□□□ -1.39
SIMC1-201ENST00000332772 VAMP3Q15836 100 aa6.36□□□□□ -1.39
SIMC1-201ENST00000332772 AMMECR1LQ6DCA0 310 aa6.36□□□□□ -1.39
SIMC1-201ENST00000332772 Q6ZVH6 145 aa6.36□□□□□ -1.39
SIMC1-201ENST00000332772 VSIG2Q96IQ7 327 aa6.36□□□□□ -1.39
SIMC1-201ENST00000332772 IGHV4-30-4P0DP06 118 aa6.36□□□□□ -1.39
SIMC1-201ENST00000332772 TSPEAR-AS2P59090 65 aa6.36□□□□□ -1.39
SIMC1-201ENST00000332772 SRSF9Q13242 221 aaKnown RBP eCLIP6.36□□□□□ -1.39
SIMC1-201ENST00000332772 FAM222AQ5U5X8 452 aa6.36□□□□□ -1.39
SIMC1-201ENST00000332772 GTF2H5Q6ZYL4 71 aa6.36□□□□□ -1.39
SIMC1-201ENST00000332772 TRAV26-1A0A087WT03 109 aa6.35□□□□□ -1.39
SIMC1-201ENST00000332772 TMEM238C9JI98 176 aa6.35□□□□□ -1.39
SIMC1-201ENST00000332772 DEFB130BP0DP73 79 aa6.35□□□□□ -1.39
SIMC1-201ENST00000332772 DEFB130AP0DP74 79 aa6.35□□□□□ -1.39
SIMC1-201ENST00000332772 DEFB135Q30KP9 77 aa6.35□□□□□ -1.39
SIMC1-201ENST00000332772 C12orf74Q32Q52 190 aa6.35□□□□□ -1.39
SIMC1-201ENST00000332772 C3orf56Q8N813 242 aa6.35□□□□□ -1.39
SIMC1-201ENST00000332772 Q8NAQ8 132 aa6.35□□□□□ -1.39
SIMC1-201ENST00000332772 ATP6V0E2Q8NHE4 81 aa6.35□□□□□ -1.39
SIMC1-201ENST00000332772 NOTCH3Q9UM47 2321 aa6.35□□□□□ -1.39
SIMC1-201ENST00000332772 IGLV5-39A0A0G2JS06 123 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 A0A1B0GUV1 79 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 TIMM17BO60830 172 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 LINC00242Q5T6M2 205 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 ZFAND6Q6FIF0 208 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 SH2D6Q7Z4S9 175 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 NHP2Q9NX24 153 aaKnown RBP6.34□□□□□ -1.39
SIMC1-201ENST00000332772 IGHV4-28A0A0C4DH34 117 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 LOC100131303A0A0U1RQF7 123 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 A0A1W2PPM0 123 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 CCL25O15444 150 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 IGHV3-30P01768 117 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 SPART-AS1P0CW21 52 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 IGHV3-30-5P0DP03 117 aa6.34□□□□□ -1.39
SIMC1-201ENST00000332772 NIPBLQ6KC79 2804 aaeCLIP6.34□□□□□ -1.39
SIMC1-201ENST00000332772 ATRQ13535 2644 aa6.33□□□□□ -1.4
SIMC1-201ENST00000332772 A0A0J9YXY3 114 aa6.33□□□□□ -1.4
SIMC1-201ENST00000332772 H3BUT2 72 aa6.33□□□□□ -1.4
SIMC1-201ENST00000332772 ATP5G1P05496 136 aa6.33□□□□□ -1.4
SIMC1-201ENST00000332772 FABP2P12104 132 aa6.33□□□□□ -1.4
SIMC1-201ENST00000332772 GYPEP15421 78 aa6.33□□□□□ -1.4
SIMC1-201ENST00000332772 DAD1P61803 113 aa6.33□□□□□ -1.4
SIMC1-201ENST00000332772 SAMD5Q5TGI4 173 aa6.33□□□□□ -1.4
SIMC1-201ENST00000332772 PGPEP1Q9NXJ5 209 aa6.33□□□□□ -1.4
SIMC1-201ENST00000332772 CDKN2A-AS1Q9UH64 79 aa6.33□□□□□ -1.4
SIMC1-201ENST00000332772 GAGE10A6NGK3 116 aa6.32□□□□□ -1.4
SIMC1-201ENST00000332772 PAX4O43316 350 aa6.32□□□□□ -1.4
SIMC1-201ENST00000332772 RNASE13Q5GAN3 156 aaKnown RBP6.32□□□□□ -1.4
SIMC1-201ENST00000332772 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
SIMC1-201ENST00000332772 SPANXDQ9BXN6 97 aa6.32□□□□□ -1.4
SIMC1-201ENST00000332772 PPDPFQ9H3Y8 114 aa6.32□□□□□ -1.4
SIMC1-201ENST00000332772 SPANXCQ9NY87 97 aa6.32□□□□□ -1.4
SIMC1-201ENST00000332772 NDUFA12Q9UI09 145 aa6.32□□□□□ -1.4
SIMC1-201ENST00000332772 IGLL5B9A064 214 aa6.32□□□□□ -1.4
SIMC1-201ENST00000332772 K7EP13 123 aa6.32□□□□□ -1.4
SIMC1-201ENST00000332772 K7EP34 96 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms