RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 TMEM258P61165 79 aa13.27□□□□□ -0.29
SOCS3-201ENST00000330871 CIRBPQ14011 172 aaKnown RBP13.27□□□□□ -0.29
SOCS3-201ENST00000330871 C9orf129Q5T035 196 aaKnown RBP13.27□□□□□ -0.29
SOCS3-201ENST00000330871 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.27□□□□□ -0.29
SOCS3-201ENST00000330871 USMG5Q96IX5 58 aa13.27□□□□□ -0.29
SOCS3-201ENST00000330871 HTN1P15515 57 aa13.26□□□□□ -0.29
SOCS3-201ENST00000330871 INAFM2P0DMQ5 153 aa13.26□□□□□ -0.29
SOCS3-201ENST00000330871 NDUFA1O15239 70 aa13.25□□□□□ -0.29
SOCS3-201ENST00000330871 UPK3BQ9BT76 320 aa13.25□□□□□ -0.29
SOCS3-201ENST00000330871 Q5XG85 94 aa13.25□□□□□ -0.29
SOCS3-201ENST00000330871 C14orf132Q9NPU4 83 aa13.25□□□□□ -0.29
SOCS3-201ENST00000330871 SPINK13Q1W4C9 94 aa13.24□□□□□ -0.29
SOCS3-201ENST00000330871 SERP2Q8N6R1 65 aa13.24□□□□□ -0.29
SOCS3-201ENST00000330871 KNCNA6PVL3 124 aa13.24□□□□□ -0.29
SOCS3-201ENST00000330871 MALP21145 153 aa13.24□□□□□ -0.29
SOCS3-201ENST00000330871 UBE2D4Q9Y2X8 147 aa13.24□□□□□ -0.29
SOCS3-201ENST00000330871 IGHV3-38A0A0C4DH36 116 aa13.23□□□□□ -0.29
SOCS3-201ENST00000330871 H3BUA1 57 aa13.23□□□□□ -0.29
SOCS3-201ENST00000330871 DNAL4O96015 105 aa13.23□□□□□ -0.29
SOCS3-201ENST00000330871 PRIMA1Q86XR5 153 aa13.23□□□□□ -0.29
SOCS3-201ENST00000330871 COX6A2Q02221 97 aa13.23□□□□□ -0.29
SOCS3-201ENST00000330871 IGHV1OR15-1A0A075B7D0 117 aa13.22□□□□□ -0.29
SOCS3-201ENST00000330871 PIK3CD-AS1Q5SR53 167 aa13.21□□□□□ -0.29
SOCS3-201ENST00000330871 LINC00467Q9BRT7 94 aa13.21□□□□□ -0.29
SOCS3-201ENST00000330871 CHCHD7Q9BUK0 85 aa13.21□□□□□ -0.29
SOCS3-201ENST00000330871 LINC00846Q9NV44 126 aa13.21□□□□□ -0.29
SOCS3-201ENST00000330871 LINC01561Q8N1V8 128 aa13.21□□□□□ -0.29
SOCS3-201ENST00000330871 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.29
SOCS3-201ENST00000330871 DOPEY2Q9Y3R5 2298 aa13.21□□□□□ -0.3
SOCS3-201ENST00000330871 BRD3OSQ6XYD6 125 aa13.2□□□□□ -0.3
SOCS3-201ENST00000330871 FAM222AQ5U5X8 452 aa13.2□□□□□ -0.3
SOCS3-201ENST00000330871 USP17L23D6RBM5 183 aa13.19□□□□□ -0.3
SOCS3-201ENST00000330871 PRM2P04554 102 aa13.19□□□□□ -0.3
SOCS3-201ENST00000330871 SYNJ2BPP57105 145 aa13.19□□□□□ -0.3
SOCS3-201ENST00000330871 LY6EQ16553 131 aa13.18□□□□□ -0.3
SOCS3-201ENST00000330871 Q6ZSN1 163 aa13.18□□□□□ -0.3
SOCS3-201ENST00000330871 FHL2Q14192 279 aa13.17□□□□□ -0.3
SOCS3-201ENST00000330871 CREBBPQ92793 2442 aa13.16□□□□□ -0.3
SOCS3-201ENST00000330871 A0A087WYN8 130 aa13.16□□□□□ -0.3
SOCS3-201ENST00000330871 K7EMT4 169 aa13.16□□□□□ -0.3
SOCS3-201ENST00000330871 BLCAPP62952 87 aa13.14□□□□□ -0.31
SOCS3-201ENST00000330871 Q6JHZ5 121 aa13.14□□□□□ -0.31
SOCS3-201ENST00000330871 IGLV1-40P01703 118 aa13.14□□□□□ -0.31
SOCS3-201ENST00000330871 HILS1P60008 231 aa13.14□□□□□ -0.31
SOCS3-201ENST00000330871 H3BUX3 64 aa13.13□□□□□ -0.31
SOCS3-201ENST00000330871 HIST2H2BCQ6DN03 193 aa13.13□□□□□ -0.31
SOCS3-201ENST00000330871 HIST2H2BDQ6DRA6 164 aa13.13□□□□□ -0.31
SOCS3-201ENST00000330871 DGAT2L7PQ6IED9 249 aa13.13□□□□□ -0.31
SOCS3-201ENST00000330871 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■□□□□ 10.4
SOCS3-201ENST00000330871 A6NDX4 124 aa13.12□□□□□ -0.31
SOCS3-201ENST00000330871 WFDC9Q8NEX5 89 aa13.12□□□□□ -0.31
SOCS3-201ENST00000330871 CELSR2Q9HCU4 2923 aa13.12□□□□□ -0.31
SOCS3-201ENST00000330871 NCR3O14931 201 aa13.12□□□□□ -0.31
SOCS3-201ENST00000330871 IGHV3OR16-12A0A075B7B8 117 aa13.12□□□□□ -0.31
SOCS3-201ENST00000330871 IGLV5-45A0A087WSX0 123 aa13.12□□□□□ -0.31
SOCS3-201ENST00000330871 IGLV5-39A0A0G2JS06 123 aa13.11□□□□□ -0.31
SOCS3-201ENST00000330871 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
SOCS3-201ENST00000330871 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
SOCS3-201ENST00000330871 IGHV4-38-2P0DP08 117 aa13.11□□□□□ -0.31
SOCS3-201ENST00000330871 RBMY1FQ15415 496 aaKnown RBP13.11□□□□□ -0.31
SOCS3-201ENST00000330871 LINC00242Q5T6M2 205 aa13.11□□□□□ -0.31
SOCS3-201ENST00000330871 LINC00337Q8N6G1 96 aa13.1□□□□□ -0.31
SOCS3-201ENST00000330871 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
SOCS3-201ENST00000330871 UCNP55089 124 aa13.1□□□□□ -0.31
SOCS3-201ENST00000330871 COPS9Q8WXC6 57 aa13.09□□□□□ -0.31
SOCS3-201ENST00000330871 SPTBN4Q9H254 2564 aa13.09□□□□□ -0.31
SOCS3-201ENST00000330871 SPG11Q96JI7 2443 aa13.08□□□□□ -0.32
SOCS3-201ENST00000330871 CRPP02741 224 aa13.08□□□□□ -0.32
SOCS3-201ENST00000330871 SLPIP03973 132 aa13.08□□□□□ -0.32
SOCS3-201ENST00000330871 RPL28P46779 137 aaKnown RBP13.08□□□□□ -0.32
SOCS3-201ENST00000330871 SNRPD3P62318 126 aaKnown RBP13.08□□□□□ -0.32
SOCS3-201ENST00000330871 PIMREGQ9BSJ6 248 aa13.08□□□□□ -0.32
SOCS3-201ENST00000330871 IGF2RP11717 2491 aa13.07□□□□□ -0.32
SOCS3-201ENST00000330871 TRAV23DV6A0A075B6W5 121 aa13.07□□□□□ -0.32
SOCS3-201ENST00000330871 CFHR3Q02985 330 aa13.07□□□□□ -0.32
SOCS3-201ENST00000330871 GHRHP01286 108 aa13.06□□□□□ -0.32
SOCS3-201ENST00000330871 ABCA2Q9BZC7 2435 aa13.06□□□□□ -0.32
SOCS3-201ENST00000330871 IGHV4-61A0A0C4DH41 118 aa13.06□□□□□ -0.32
SOCS3-201ENST00000330871 ZNF415Q09FC8 603 aa13.06□□□□□ -0.32
SOCS3-201ENST00000330871 SMIM11BQ8TCY0 68 aa13.06□□□□□ -0.32
SOCS3-201ENST00000330871 LECT2O14960 151 aa13.05□□□□□ -0.32
SOCS3-201ENST00000330871 IGKV2-28A0A075B6P5 120 aa13.05□□□□□ -0.32
SOCS3-201ENST00000330871 IGKV2D-28P01615 120 aa13.05□□□□□ -0.32
SOCS3-201ENST00000330871 TRAV13-2A0A0B4J235 113 aa13.04□□□□□ -0.32
SOCS3-201ENST00000330871 PFN2P35080 140 aa13.04□□□□□ -0.32
SOCS3-201ENST00000330871 C20orf197Q8N268 126 aa13.04□□□□□ -0.32
SOCS3-201ENST00000330871 HIVEP3Q5T1R4 2406 aa13.04□□□□□ -0.32
SOCS3-201ENST00000330871 K7EQG2 157 aa13.04□□□□□ -0.32
SOCS3-201ENST00000330871 NOTCH3Q9UM47 2321 aa13.03□□□□□ -0.32
SOCS3-201ENST00000330871 TMEM243Q9BU79 118 aa13.03□□□□□ -0.32
SOCS3-201ENST00000330871 MRAPQ8TCY5 172 aa13.03□□□□□ -0.32
SOCS3-201ENST00000330871 LINC00336Q6ZUF6 198 aa13.02□□□□□ -0.32
SOCS3-201ENST00000330871 FAM19A1Q7Z5A9 133 aa13.02□□□□□ -0.32
SOCS3-201ENST00000330871 MIR7-3HGQ8N6C7 128 aa13.02□□□□□ -0.32
SOCS3-201ENST00000330871 SND1-IT1Q9HBX3 110 aa13.02□□□□□ -0.32
SOCS3-201ENST00000330871 C2CD3Q4AC94 2353 aa13.02□□□□□ -0.33
SOCS3-201ENST00000330871 PSMB8P28062 276 aa13.02□□□□□ -0.33
SOCS3-201ENST00000330871 OBSCN-AS1Q96MR7 158 aa13.02□□□□□ -0.33
SOCS3-201ENST00000330871 C19orf84I3L1E1 186 aa13□□□□□ -0.33
SOCS3-201ENST00000330871 Q96MF0 132 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms