RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 ESM1Q9NQ30 184 aa13.68□□□□□ -0.22
SPSB1-201ENST00000328089 DNAJC9-AS1A6NH13 148 aa13.68□□□□□ -0.22
SPSB1-201ENST00000328089 INSP01308 110 aa13.68□□□□□ -0.22
SPSB1-201ENST00000328089 ERG28Q9UKR5 140 aa13.68□□□□□ -0.22
SPSB1-201ENST00000328089 LINC00694P0DN24 101 aa13.68□□□□□ -0.22
SPSB1-201ENST00000328089 A8MWV9 139 aa13.67□□□□□ -0.22
SPSB1-201ENST00000328089 RPL32P62910 135 aaKnown RBP13.67□□□□□ -0.22
SPSB1-201ENST00000328089 CCL24O00175 119 aa13.66□□□□□ -0.22
SPSB1-201ENST00000328089 FAM104AQ969W3 186 aa13.66□□□□□ -0.22
SPSB1-201ENST00000328089 YAE1D1Q9NRH1 226 aa13.66□□□□□ -0.22
SPSB1-201ENST00000328089 GAGE7O76087 117 aa13.66□□□□□ -0.22
SPSB1-201ENST00000328089 GAGE12FP0CL80 117 aa13.66□□□□□ -0.22
SPSB1-201ENST00000328089 GAGE12GP0CL81 117 aa13.66□□□□□ -0.22
SPSB1-201ENST00000328089 GAGE12IP0CL82 117 aa13.66□□□□□ -0.22
SPSB1-201ENST00000328089 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.66□□□□□ -0.22
SPSB1-201ENST00000328089 CHCHD7Q9BUK0 85 aa13.66□□□□□ -0.22
SPSB1-201ENST00000328089 LOC100131303A0A0U1RQF7 123 aa13.65□□□□□ -0.22
SPSB1-201ENST00000328089 C4orf3Q8WVX3 66 aa13.65□□□□□ -0.22
SPSB1-201ENST00000328089 FLNBO75369 2602 aaKnown RBP13.65□□□□□ -0.22
SPSB1-201ENST00000328089 COX6A2Q02221 97 aa13.65□□□□□ -0.22
SPSB1-201ENST00000328089 FOXI1Q12951 378 aa13.64□□□□□ -0.23
SPSB1-201ENST00000328089 SMR3AQ99954 134 aa13.64□□□□□ -0.23
SPSB1-201ENST00000328089 TRGV2A0A075B6R0 118 aa13.64□□□□□ -0.23
SPSB1-201ENST00000328089 UBE2D4Q9Y2X8 147 aa13.64□□□□□ -0.23
SPSB1-201ENST00000328089 C11orf72Q8NBR9 251 aa13.63□□□□□ -0.23
SPSB1-201ENST00000328089 C1orf158Q8N1D5 194 aa13.63□□□□□ -0.23
SPSB1-201ENST00000328089 CKS1BP61024 79 aa13.62□□□□□ -0.23
SPSB1-201ENST00000328089 ANKRD29Q8N6D5 301 aa13.62□□□□□ -0.23
SPSB1-201ENST00000328089 FSHBP01225 129 aa13.62□□□□□ -0.23
SPSB1-201ENST00000328089 HERV-K104P63124 156 aa13.62□□□□□ -0.23
SPSB1-201ENST00000328089 CLEC2BQ92478 149 aa13.62□□□□□ -0.23
SPSB1-201ENST00000328089 CITED1Q99966 193 aa13.62□□□□□ -0.23
SPSB1-201ENST00000328089 TENM1Q9UKZ4 2725 aa13.61□□□□□ -0.23
SPSB1-201ENST00000328089 IGHV3-33P01772 117 aa13.61□□□□□ -0.23
SPSB1-201ENST00000328089 C1QTNF4Q9BXJ3 329 aa13.61□□□□□ -0.23
SPSB1-201ENST00000328089 TOMM7Q9P0U1 55 aa13.61□□□□□ -0.23
SPSB1-201ENST00000328089 UBE2D3P61077 147 aa13.61□□□□□ -0.23
SPSB1-201ENST00000328089 UBE2D2P62837 147 aa13.61□□□□□ -0.23
SPSB1-201ENST00000328089 FHL3Q13643 280 aa13.61□□□□□ -0.23
SPSB1-201ENST00000328089 OTOGQ6ZRI0 2925 aa13.6□□□□□ -0.23
SPSB1-201ENST00000328089 CARD19Q96LW7 228 aa13.59□□□□□ -0.23
SPSB1-201ENST00000328089 SS18L2Q9UHA2 77 aa13.59□□□□□ -0.23
SPSB1-201ENST00000328089 IGHV1-58A0A0C4DH39 117 aa13.59□□□□□ -0.23
SPSB1-201ENST00000328089 SLC25A20O43772 301 aa13.59□□□□□ -0.23
SPSB1-201ENST00000328089 A0A096LPF7 62 aa13.59□□□□□ -0.23
SPSB1-201ENST00000328089 Q9H8V8 135 aa13.59□□□□□ -0.23
SPSB1-201ENST00000328089 TEP1Q99973 2627 aaKnown RBP13.58□□□□□ -0.23
SPSB1-201ENST00000328089 MT-ATP8P03928 68 aa13.58□□□□□ -0.24
SPSB1-201ENST00000328089 DEFB130BP0DP73 79 aa13.58□□□□□ -0.24
SPSB1-201ENST00000328089 DEFB130AP0DP74 79 aa13.58□□□□□ -0.24
SPSB1-201ENST00000328089 TMEM263Q8WUH6 116 aaKnown RBP13.58□□□□□ -0.24
SPSB1-201ENST00000328089 C11orf68Q9H3H3 251 aaKnown RBP13.58□□□□□ -0.24
SPSB1-201ENST00000328089 VSIG2Q96IQ7 327 aa13.58□□□□□ -0.24
SPSB1-201ENST00000328089 TRIAP1O43715 76 aa13.57□□□□□ -0.24
SPSB1-201ENST00000328089 MRPS36P82909 103 aaKnown RBP13.57□□□□□ -0.24
SPSB1-201ENST00000328089 MEIG1Q5JSS6 88 aa13.57□□□□□ -0.24
SPSB1-201ENST00000328089 NTN5Q8WTR8 489 aaPredicted RBP13.57□□□□□ -0.24
SPSB1-201ENST00000328089 KRTAP1-3Q8IUG1 177 aa13.57□□□□□ -0.24
SPSB1-201ENST00000328089 LYRM7Q5U5X0 104 aa13.56□□□□□ -0.24
SPSB1-201ENST00000328089 TEX49A0A1B0GTD5 131 aa13.55□□□□□ -0.24
SPSB1-201ENST00000328089 RNF152Q8N8N0 203 aa13.55□□□□□ -0.24
SPSB1-201ENST00000328089 TMEM101Q96IK0 257 aa13.55□□□□□ -0.24
SPSB1-201ENST00000328089 GAGE6Q13070 117 aa13.55□□□□□ -0.24
SPSB1-201ENST00000328089 PDZD2O15018 2839 aa13.54□□□□□ -0.24
SPSB1-201ENST00000328089 RPL36AP83881 106 aaKnown RBP13.54□□□□□ -0.24
SPSB1-201ENST00000328089 RPL36ALQ969Q0 106 aaKnown RBP13.54□□□□□ -0.24
SPSB1-201ENST00000328089 NTM-AS1Q6ZSK4 140 aa13.54□□□□□ -0.24
SPSB1-201ENST00000328089 TEN1Q86WV5 123 aa13.53□□□□□ -0.24
SPSB1-201ENST00000328089 LINC01006Q8NI28 216 aa13.53□□□□□ -0.24
SPSB1-201ENST00000328089 DEFB4AO15263 64 aa13.53□□□□□ -0.24
SPSB1-201ENST00000328089 UBE2L6O14933 153 aa13.53□□□□□ -0.24
SPSB1-201ENST00000328089 RPL13AP40429 203 aaKnown RBP13.53□□□□□ -0.24
SPSB1-201ENST00000328089 XGP55808 180 aa13.53□□□□□ -0.24
SPSB1-201ENST00000328089 CLPSL2Q6UWE3 100 aa13.53□□□□□ -0.24
SPSB1-201ENST00000328089 PRIMA1Q86XR5 153 aa13.53□□□□□ -0.24
SPSB1-201ENST00000328089 TRGV4A0A0C4DH28 118 aa13.52□□□□□ -0.24
SPSB1-201ENST00000328089 LITAFQ99732 161 aa13.52□□□□□ -0.24
SPSB1-201ENST00000328089 PYGO1Q9Y3Y4 419 aa13.52□□□□□ -0.24
SPSB1-201ENST00000328089 TRRAPQ9Y4A5 3859 aa13.51□□□□□ -0.25
SPSB1-201ENST00000328089 SPANXA1Q9NS26 97 aa13.51□□□□□ -0.25
SPSB1-201ENST00000328089 LINC00242Q5T6M2 205 aa13.51□□□□□ -0.25
SPSB1-201ENST00000328089 TRBV20-1A0A075B6N2 111 aa13.5□□□□□ -0.25
SPSB1-201ENST00000328089 TINCRA0A1B0GVN0 87 aa13.5□□□□□ -0.25
SPSB1-201ENST00000328089 PPDPFLQ8WWR9 84 aa13.5□□□□□ -0.25
SPSB1-201ENST00000328089 PIK3CD-AS1Q5SR53 167 aa13.5□□□□□ -0.25
SPSB1-201ENST00000328089 CDIP1Q9H305 208 aa13.5□□□□□ -0.25
SPSB1-201ENST00000328089 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.5□□□□□ -0.25
SPSB1-201ENST00000328089 RS1O15537 224 aa13.5□□□□□ -0.25
SPSB1-201ENST00000328089 K7EQD1 137 aa13.49□□□□□ -0.25
SPSB1-201ENST00000328089 Q8N2B8 174 aa13.49□□□□□ -0.25
SPSB1-201ENST00000328089 CRLF1O75462 422 aa13.49□□□□□ -0.25
SPSB1-201ENST00000328089 CHCHD5Q9BSY4 110 aa13.48□□□□□ -0.25
SPSB1-201ENST00000328089 ICOSQ9Y6W8 199 aa13.48□□□□□ -0.25
SPSB1-201ENST00000328089 LINC01620Q4KN68 170 aa13.48□□□□□ -0.25
SPSB1-201ENST00000328089 MIAQ16674 131 aa13.47□□□□□ -0.25
SPSB1-201ENST00000328089 C2orf82Q6UX34 121 aa13.47□□□□□ -0.25
SPSB1-201ENST00000328089 TMEM262E9PQX1 116 aa13.46□□□□□ -0.25
SPSB1-201ENST00000328089 SPATA25Q9BR10 227 aa13.46□□□□□ -0.25
SPSB1-201ENST00000328089 ATXN8Q156A1 80 aa13.46□□□□□ -0.25
SPSB1-201ENST00000328089 C5orf38Q86SI9 138 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms