RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 TSHBP01222 138 aa9.88□□□□□ -0.83
PCDHB9-201ENST00000316105 VSIG2Q96IQ7 327 aa9.88□□□□□ -0.83
PCDHB9-201ENST00000316105 IGHV1-58A0A0C4DH39 117 aa9.87□□□□□ -0.83
PCDHB9-201ENST00000316105 GYPEP15421 78 aa9.87□□□□□ -0.83
PCDHB9-201ENST00000316105 C5orf38Q86SI9 138 aa9.87□□□□□ -0.83
PCDHB9-201ENST00000316105 ZMAT4Q9H898 229 aa9.87□□□□□ -0.83
PCDHB9-201ENST00000316105 MAP1AP78559 2803 aaPredicted RBP9.87□□□□□ -0.83
PCDHB9-201ENST00000316105 CRLF1O75462 422 aa9.87□□□□□ -0.83
PCDHB9-201ENST00000316105 TRBV10-1A0A0K0K1A3 114 aa9.87□□□□□ -0.83
PCDHB9-201ENST00000316105 XCL1P47992 114 aa9.87□□□□□ -0.83
PCDHB9-201ENST00000316105 ANKRD29Q8N6D5 301 aa9.87□□□□□ -0.83
PCDHB9-201ENST00000316105 LINC01006Q8NI28 216 aa9.87□□□□□ -0.83
PCDHB9-201ENST00000316105 TRAV4A0A0B4J268 109 aa9.86□□□□□ -0.83
PCDHB9-201ENST00000316105 MRPL23Q16540 153 aaKnown RBP9.86□□□□□ -0.83
PCDHB9-201ENST00000316105 SLC25A29Q8N8R3 303 aa9.86□□□□□ -0.83
PCDHB9-201ENST00000316105 C9orf66Q5T8R8 295 aa9.86□□□□□ -0.83
PCDHB9-201ENST00000316105 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
PCDHB9-201ENST00000316105 NDUFA11Q86Y39 141 aa9.85□□□□□ -0.83
PCDHB9-201ENST00000316105 OVOL2Q9BRP0 275 aa9.85□□□□□ -0.83
PCDHB9-201ENST00000316105 NXPH4O95158 308 aa9.85□□□□□ -0.83
PCDHB9-201ENST00000316105 S100A7L2Q5SY68 101 aa9.85□□□□□ -0.83
PCDHB9-201ENST00000316105 ATP6V0E2Q8NHE4 81 aa9.85□□□□□ -0.83
PCDHB9-201ENST00000316105 ESM1Q9NQ30 184 aa9.85□□□□□ -0.83
PCDHB9-201ENST00000316105 WFDC10AQ9H1F0 79 aa9.85□□□□□ -0.83
PCDHB9-201ENST00000316105 IGIPA6NJ69 53 aa9.84□□□□□ -0.83
PCDHB9-201ENST00000316105 TMEM223A0PJW6 202 aa9.84□□□□□ -0.83
PCDHB9-201ENST00000316105 DEFB4AO15263 64 aa9.84□□□□□ -0.83
PCDHB9-201ENST00000316105 ADGRG4Q8IZF6 3080 aa9.84□□□□□ -0.83
PCDHB9-201ENST00000316105 CDKN2A-AS1Q9UH64 79 aa9.84□□□□□ -0.83
PCDHB9-201ENST00000316105 A0A0J9YXY3 114 aa9.83□□□□□ -0.84
PCDHB9-201ENST00000316105 DEFB135Q30KP9 77 aa9.83□□□□□ -0.84
PCDHB9-201ENST00000316105 CARD19Q96LW7 228 aa9.83□□□□□ -0.84
PCDHB9-201ENST00000316105 TRACP01848 142 aa9.83□□□□□ -0.84
PCDHB9-201ENST00000316105 TINCRA0A1B0GVN0 87 aa9.83□□□□□ -0.84
PCDHB9-201ENST00000316105 ODF3L2Q3SX64 289 aa9.83□□□□□ -0.84
PCDHB9-201ENST00000316105 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
PCDHB9-201ENST00000316105 NDUFV3P56181 108 aaKnown RBP9.82□□□□□ -0.84
PCDHB9-201ENST00000316105 NFE4Q86UQ8 179 aa9.82□□□□□ -0.84
PCDHB9-201ENST00000316105 TMEM126AQ9H061 195 aa9.82□□□□□ -0.84
PCDHB9-201ENST00000316105 RS1O15537 224 aa9.81□□□□□ -0.84
PCDHB9-201ENST00000316105 FAM236AA0A1B0GUQ0 79 aa9.81□□□□□ -0.84
PCDHB9-201ENST00000316105 FAM236BA0A1B0GV22 79 aa9.81□□□□□ -0.84
PCDHB9-201ENST00000316105 KLK9Q2XQG4 91 aa9.81□□□□□ -0.84
PCDHB9-201ENST00000316105 DMXL2Q8TDJ6 3036 aa9.81□□□□□ -0.84
PCDHB9-201ENST00000316105 INSL3P51460 131 aa9.8□□□□□ -0.84
PCDHB9-201ENST00000316105 PYGO1Q9Y3Y4 419 aa9.8□□□□□ -0.84
PCDHB9-201ENST00000316105 ICOSQ9Y6W8 199 aa9.8□□□□□ -0.84
PCDHB9-201ENST00000316105 PSCAO43653 123 aa9.8□□□□□ -0.84
PCDHB9-201ENST00000316105 SPATA25Q9BR10 227 aa9.8□□□□□ -0.84
PCDHB9-201ENST00000316105 LOC400499M0QZD8 3231 aa9.79□□□□□ -0.84
PCDHB9-201ENST00000316105 IGLV10-54A0A075B6I4 117 aa9.79□□□□□ -0.84
PCDHB9-201ENST00000316105 TRAV13-2A0A0B4J235 113 aa9.79□□□□□ -0.84
PCDHB9-201ENST00000316105 A8MZ25 164 aa9.79□□□□□ -0.84
PCDHB9-201ENST00000316105 F8P00451 2351 aa9.79□□□□□ -0.84
PCDHB9-201ENST00000316105 COX7B2Q8TF08 81 aa9.79□□□□□ -0.84
PCDHB9-201ENST00000316105 INAFM2P0DMQ5 153 aa9.79□□□□□ -0.84
PCDHB9-201ENST00000316105 KIF25-AS1Q9Y6Z4 181 aa9.79□□□□□ -0.84
PCDHB9-201ENST00000316105 J3KT08 172 aa9.78□□□□□ -0.84
PCDHB9-201ENST00000316105 LINC01620Q4KN68 170 aa9.78□□□□□ -0.84
PCDHB9-201ENST00000316105 MRAPQ8TCY5 172 aa9.78□□□□□ -0.84
PCDHB9-201ENST00000316105 DMXL1Q9Y485 3027 aa9.78□□□□□ -0.84
PCDHB9-201ENST00000316105 TCL1BO95988 128 aa9.78□□□□□ -0.84
PCDHB9-201ENST00000316105 INAFM1C9JVW0 142 aa9.78□□□□□ -0.84
PCDHB9-201ENST00000316105 FAM19A4Q96LR4 140 aa9.78□□□□□ -0.84
PCDHB9-201ENST00000316105 IGLV4-69A0A075B6H9 119 aa9.77□□□□□ -0.84
PCDHB9-201ENST00000316105 ATP5G1P05496 136 aa9.77□□□□□ -0.84
PCDHB9-201ENST00000316105 MIAQ16674 131 aa9.77□□□□□ -0.84
PCDHB9-201ENST00000316105 C1orf43Q9BWL3 253 aa9.77□□□□□ -0.85
PCDHB9-201ENST00000316105 SND1-IT1Q9HBX3 110 aa9.76□□□□□ -0.85
PCDHB9-201ENST00000316105 UBE2D4Q9Y2X8 147 aa9.76□□□□□ -0.85
PCDHB9-201ENST00000316105 XGP55808 180 aa9.76□□□□□ -0.85
PCDHB9-201ENST00000316105 HILS1P60008 231 aa9.76□□□□□ -0.85
PCDHB9-201ENST00000316105 IGHV3-30P01768 117 aa9.76□□□□□ -0.85
PCDHB9-201ENST00000316105 IGHV3-30-5P0DP03 117 aa9.76□□□□□ -0.85
PCDHB9-201ENST00000316105 SMR3AQ99954 134 aa9.76□□□□□ -0.85
PCDHB9-201ENST00000316105 PRO0255Q9UI72 69 aa9.76□□□□□ -0.85
PCDHB9-201ENST00000316105 SPANXDQ9BXN6 97 aa9.76□□□□□ -0.85
PCDHB9-201ENST00000316105 SPART-AS1P0CW21 52 aa9.75□□□□□ -0.85
PCDHB9-201ENST00000316105 LINC01546A6NGU7 62 aa9.75□□□□□ -0.85
PCDHB9-201ENST00000316105 LINC00482Q8N8I6 264 aa9.75□□□□□ -0.85
PCDHB9-201ENST00000316105 A0A0B4J2C4 111 aa9.75□□□□□ -0.85
PCDHB9-201ENST00000316105 CLEC2BQ92478 149 aa9.75□□□□□ -0.85
PCDHB9-201ENST00000316105 PLA2G2AP14555 144 aa9.74□□□□□ -0.85
PCDHB9-201ENST00000316105 LINC00315P59091 139 aa9.74□□□□□ -0.85
PCDHB9-201ENST00000316105 PIK3CD-AS1Q5SR53 167 aa9.74□□□□□ -0.85
PCDHB9-201ENST00000316105 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
PCDHB9-201ENST00000316105 LOC100131303A0A0U1RQF7 123 aa9.74□□□□□ -0.85
PCDHB9-201ENST00000316105 LY6G6DO95868 133 aa9.74□□□□□ -0.85
PCDHB9-201ENST00000316105 MIR7-3HGQ8N6C7 128 aa9.74□□□□□ -0.85
PCDHB9-201ENST00000316105 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
PCDHB9-201ENST00000316105 ZNF561-AS1K7EIQ3 104 aa9.73□□□□□ -0.85
PCDHB9-201ENST00000316105 RBMY1FQ15415 496 aaKnown RBP9.73□□□□□ -0.85
PCDHB9-201ENST00000316105 C1orf158Q8N1D5 194 aa9.73□□□□□ -0.85
PCDHB9-201ENST00000316105 TIRAPP58753 221 aa9.73□□□□□ -0.85
PCDHB9-201ENST00000316105 LAMTOR3Q9UHA4 124 aa9.73□□□□□ -0.85
PCDHB9-201ENST00000316105 TRBV6-4A0A1B0GX49 114 aa9.72□□□□□ -0.85
PCDHB9-201ENST00000316105 CCDC179H3BU77 68 aa9.72□□□□□ -0.85
PCDHB9-201ENST00000316105 MRPS36P82909 103 aaKnown RBP9.72□□□□□ -0.85
PCDHB9-201ENST00000316105 COX7A2LO14548 114 aa9.72□□□□□ -0.85
PCDHB9-201ENST00000316105 Q6ZSN1 163 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms