RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 LAMA3Q16787 3333 aa6.64□□□□□ -1.35
BDNF-201ENST00000314915 IGKV2-29A2NJV5 120 aaPredicted RBP6.64□□□□□ -1.35
BDNF-201ENST00000314915 LRCOL1A6NCL2 159 aa6.64□□□□□ -1.35
BDNF-201ENST00000314915 CCL24O00175 119 aa6.64□□□□□ -1.35
BDNF-201ENST00000314915 LIMD2Q9BT23 127 aa6.64□□□□□ -1.35
BDNF-201ENST00000314915 SMAD5-AS1Q9Y6J3 95 aa6.64□□□□□ -1.35
BDNF-201ENST00000314915 LINC00315P59091 139 aa6.63□□□□□ -1.35
BDNF-201ENST00000314915 RIF1Q5UIP0 2472 aaKnown RBP6.63□□□□□ -1.35
BDNF-201ENST00000314915 MRGPRG-AS1Q2M3A8 158 aa6.63□□□□□ -1.35
BDNF-201ENST00000314915 Q5VV11 94 aa6.63□□□□□ -1.35
BDNF-201ENST00000314915 WDR87Q6ZQQ6 2873 aa6.63□□□□□ -1.35
BDNF-201ENST00000314915 TRBV6-8A0A0A6YYG3 113 aa6.63□□□□□ -1.35
BDNF-201ENST00000314915 SMIM11BQ8TCY0 68 aa6.63□□□□□ -1.35
BDNF-201ENST00000314915 MALRD1Q5VYJ5 2156 aa6.62□□□□□ -1.35
BDNF-201ENST00000314915 C5orf42Q9H799 3197 aa6.62□□□□□ -1.35
BDNF-201ENST00000314915 PDE6GP18545 87 aa6.62□□□□□ -1.35
BDNF-201ENST00000314915 HTTP42858 3142 aa6.62□□□□□ -1.35
BDNF-201ENST00000314915 GNLYP22749 145 aa6.62□□□□□ -1.35
BDNF-201ENST00000314915 DEFB104AQ8WTQ1 72 aa6.62□□□□□ -1.35
BDNF-201ENST00000314915 MDFIQ99750 246 aa6.62□□□□□ -1.35
BDNF-201ENST00000314915 TRBV10-1A0A0K0K1A3 114 aa6.61□□□□□ -1.35
BDNF-201ENST00000314915 C10orf142B7Z368 130 aa6.61□□□□□ -1.35
BDNF-201ENST00000314915 SPTBN2O15020 2390 aa6.61□□□□□ -1.35
BDNF-201ENST00000314915 CADP27708 2225 aa6.61□□□□□ -1.35
BDNF-201ENST00000314915 PSCAO43653 123 aa6.61□□□□□ -1.35
BDNF-201ENST00000314915 GAFA1Q96PS6 74 aa6.61□□□□□ -1.35
BDNF-201ENST00000314915 LINC01356Q8N9X3 169 aa6.61□□□□□ -1.35
BDNF-201ENST00000314915 IGHV3OR16-8A0A075B7F1 116 aa6.6□□□□□ -1.35
BDNF-201ENST00000314915 LINC00167Q96N53 147 aa6.6□□□□□ -1.35
BDNF-201ENST00000314915 DNAH14Q0VDD8 3507 aa6.6□□□□□ -1.35
BDNF-201ENST00000314915 IGHV3-35A0A0C4DH35 117 aa6.59□□□□□ -1.35
BDNF-201ENST00000314915 IGKV3-15P01624 115 aa6.59□□□□□ -1.35
BDNF-201ENST00000314915 LINC01554Q52M75 96 aa6.59□□□□□ -1.35
BDNF-201ENST00000314915 ITLN2Q8WWU7 325 aaPredicted RBP6.59□□□□□ -1.35
BDNF-201ENST00000314915 WNK2Q9Y3S1 2297 aa6.59□□□□□ -1.35
BDNF-201ENST00000314915 LOC110117498A0A087WWA1 95 aa6.59□□□□□ -1.35
BDNF-201ENST00000314915 GNRH2O43555 120 aa6.59□□□□□ -1.35
BDNF-201ENST00000314915 EP300Q09472 2414 aaPredicted RBP6.59□□□□□ -1.35
BDNF-201ENST00000314915 LOC100131303A0A0U1RQF7 123 aa6.59□□□□□ -1.36
BDNF-201ENST00000314915 SLPIP03973 132 aa6.59□□□□□ -1.36
BDNF-201ENST00000314915 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.59□□□□□ -1.36
BDNF-201ENST00000314915 COX7A1P24310 79 aa6.58□□□□□ -1.36
BDNF-201ENST00000314915 LAMA2P24043 3122 aaKnown RBP6.58□□□□□ -1.36
BDNF-201ENST00000314915 IGLV5-45A0A087WSX0 123 aa6.58□□□□□ -1.36
BDNF-201ENST00000314915 IGHV3-23P01764 117 aa6.58□□□□□ -1.36
BDNF-201ENST00000314915 LINC00337Q8N6G1 96 aa6.58□□□□□ -1.36
BDNF-201ENST00000314915 SND1-IT1Q9HBX3 110 aa6.58□□□□□ -1.36
BDNF-201ENST00000314915 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
BDNF-201ENST00000314915 CEP250Q9BV73 2442 aa6.58□□□□□ -1.36
BDNF-201ENST00000314915 A8MU10 97 aa6.57□□□□□ -1.36
BDNF-201ENST00000314915 RNASE3P12724 160 aaKnown RBP6.57□□□□□ -1.36
BDNF-201ENST00000314915 Q6ZQT0 140 aa6.57□□□□□ -1.36
BDNF-201ENST00000314915 Q6ZTI0 123 aa6.57□□□□□ -1.36
BDNF-201ENST00000314915 MP68P56378 58 aa6.57□□□□□ -1.36
BDNF-201ENST00000314915 OCR1Q9BZK8 76 aa6.57□□□□□ -1.36
BDNF-201ENST00000314915 HIGD2AQ9BW72 106 aa6.57□□□□□ -1.36
BDNF-201ENST00000314915 CACNA1HO95180 2353 aa6.57□□□□□ -1.36
BDNF-201ENST00000314915 M0QY20 66 aa6.57□□□□□ -1.36
BDNF-201ENST00000314915 CDKN2A-AS1Q9UH64 79 aa6.57□□□□□ -1.36
BDNF-201ENST00000314915 RNASE13Q5GAN3 156 aaKnown RBP6.56□□□□□ -1.36
BDNF-201ENST00000314915 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
BDNF-201ENST00000314915 MAP1BP46821 2468 aaKnown RBP6.56□□□□□ -1.36
BDNF-201ENST00000314915 RNF5Q99942 180 aa6.56□□□□□ -1.36
BDNF-201ENST00000314915 IGHV3OR16-13A0A075B7E8 117 aa6.56□□□□□ -1.36
BDNF-201ENST00000314915 IGHV3-74A0A0B4J1X5 117 aa6.56□□□□□ -1.36
BDNF-201ENST00000314915 IGHV3-38A0A0C4DH36 116 aa6.56□□□□□ -1.36
BDNF-201ENST00000314915 A6NED7 52 aa6.56□□□□□ -1.36
BDNF-201ENST00000314915 RP1L1Q8IWN7 2480 aaPredicted RBP6.56□□□□□ -1.36
BDNF-201ENST00000314915 IGHV3-66A0A0C4DH42 116 aa6.55□□□□□ -1.36
BDNF-201ENST00000314915 PRB3Q04118 309 aaPredicted RBP6.55□□□□□ -1.36
BDNF-201ENST00000314915 ROS1P08922 2347 aa6.55□□□□□ -1.36
BDNF-201ENST00000314915 LINC00313P59037 77 aa6.55□□□□□ -1.36
BDNF-201ENST00000314915 PRR9Q5T870 116 aa6.55□□□□□ -1.36
BDNF-201ENST00000314915 C9orf106Q8NAJ2 232 aa6.54□□□□□ -1.36
BDNF-201ENST00000314915 FDCSPQ8NFU4 85 aa6.54□□□□□ -1.36
BDNF-201ENST00000314915 IGHV1-46P01743 117 aa6.54□□□□□ -1.36
BDNF-201ENST00000314915 C19orf54Q5BKX5 351 aa6.54□□□□□ -1.36
BDNF-201ENST00000314915 ZFAND2AQ8N6M9 145 aa6.54□□□□□ -1.36
BDNF-201ENST00000314915 FAM74A4Q5TZK3 123 aa6.54□□□□□ -1.36
BDNF-201ENST00000314915 Q75L30 129 aa6.54□□□□□ -1.36
BDNF-201ENST00000314915 BDP1A6H8Y1 2624 aa6.54□□□□□ -1.36
BDNF-201ENST00000314915 MUC6Q6W4X9 2439 aa6.53□□□□□ -1.36
BDNF-201ENST00000314915 IGKV2-28A0A075B6P5 120 aa6.53□□□□□ -1.36
BDNF-201ENST00000314915 H3BQ85 93 aa6.53□□□□□ -1.36
BDNF-201ENST00000314915 IGKV2D-28P01615 120 aa6.53□□□□□ -1.36
BDNF-201ENST00000314915 LPAL2Q16609 132 aa6.53□□□□□ -1.36
BDNF-201ENST00000314915 SEM1Q6ZVN7 128 aa6.53□□□□□ -1.36
BDNF-201ENST00000314915 Q8N814 137 aa6.53□□□□□ -1.36
BDNF-201ENST00000314915 IGHV3-49A0A0A0MS15 119 aa6.53□□□□□ -1.36
BDNF-201ENST00000314915 K7EQG2 157 aa6.53□□□□□ -1.36
BDNF-201ENST00000314915 IGHV1-3A0A0C4DH29 117 aa6.52□□□□□ -1.37
BDNF-201ENST00000314915 CLPSL1A2RUU4 121 aa6.52□□□□□ -1.37
BDNF-201ENST00000314915 C9orf116Q5BN46 136 aaPredicted RBP6.52□□□□□ -1.37
BDNF-201ENST00000314915 CACNA1GO43497 2377 aa6.52□□□□□ -1.37
BDNF-201ENST00000314915 NTM-AS1Q6ZSK4 140 aa6.52□□□□□ -1.37
BDNF-201ENST00000314915 PRR15LQ9BU68 103 aa6.52□□□□□ -1.37
BDNF-201ENST00000314915 IGLV11-55A0A075B6I3 123 aa6.52□□□□□ -1.37
BDNF-201ENST00000314915 LY6G6EA0A0G2JKS1 128 aa6.52□□□□□ -1.37
BDNF-201ENST00000314915 IGHV1-8P0DP01 117 aa6.52□□□□□ -1.37
BDNF-201ENST00000314915 FAM104AQ969W3 186 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms