RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 RETNQ9HD89 108 aa11.72□□□□□ -0.53
CLCF1-201ENST00000312438 HERVK_113P61574 105 aa11.72□□□□□ -0.53
CLCF1-201ENST00000312438 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
CLCF1-201ENST00000312438 Q6ZUT4 128 aa11.72□□□□□ -0.53
CLCF1-201ENST00000312438 A0A0J9YXV3 536 aa11.71□□□□□ -0.54
CLCF1-201ENST00000312438 EREGO14944 169 aa11.71□□□□□ -0.54
CLCF1-201ENST00000312438 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.54
CLCF1-201ENST00000312438 NBEAL2Q6ZNJ1 2754 aa11.7□□□□□ -0.54
CLCF1-201ENST00000312438 TRAV8-6A0A0B4J262 113 aa11.7□□□□□ -0.54
CLCF1-201ENST00000312438 RNASE13Q5GAN3 156 aaKnown RBP11.7□□□□□ -0.54
CLCF1-201ENST00000312438 AMMECR1LQ6DCA0 310 aa11.7□□□□□ -0.54
CLCF1-201ENST00000312438 C2orf91Q6ZV80 131 aa11.7□□□□□ -0.54
CLCF1-201ENST00000312438 VSIG2Q96IQ7 327 aa11.7□□□□□ -0.54
CLCF1-201ENST00000312438 F5H768 121 aa11.7□□□□□ -0.54
CLCF1-201ENST00000312438 TMEM101Q96IK0 257 aa11.7□□□□□ -0.54
CLCF1-201ENST00000312438 OR5A1Q8NGJ0 315 aa11.69□□□□□ -0.54
CLCF1-201ENST00000312438 TTTY13Q9BZ97 58 aa11.69□□□□□ -0.54
CLCF1-201ENST00000312438 C11orf68Q9H3H3 251 aaKnown RBP11.69□□□□□ -0.54
CLCF1-201ENST00000312438 A0A0J9YY99 117 aa11.68□□□□□ -0.54
CLCF1-201ENST00000312438 TINCRA0A1B0GVN0 87 aa11.68□□□□□ -0.54
CLCF1-201ENST00000312438 C12orf74Q32Q52 190 aa11.68□□□□□ -0.54
CLCF1-201ENST00000312438 KPRPQ5T749 579 aaPredicted RBP11.68□□□□□ -0.54
CLCF1-201ENST00000312438 CDC42SE2Q9NRR3 84 aa11.68□□□□□ -0.54
CLCF1-201ENST00000312438 ZNF22P17026 224 aaPredicted RBP11.67□□□□□ -0.54
CLCF1-201ENST00000312438 ZNF25P17030 456 aaPredicted RBP11.67□□□□□ -0.54
CLCF1-201ENST00000312438 BATFQ16520 125 aa11.67□□□□□ -0.54
CLCF1-201ENST00000312438 MAPKAPK5-AS1Q8N8E1 139 aa11.67□□□□□ -0.54
CLCF1-201ENST00000312438 TRAV26-1A0A087WT03 109 aa11.67□□□□□ -0.54
CLCF1-201ENST00000312438 HINT1P49773 126 aaPredicted RBP11.67□□□□□ -0.54
CLCF1-201ENST00000312438 UBE2D1P51668 147 aa11.67□□□□□ -0.54
CLCF1-201ENST00000312438 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
CLCF1-201ENST00000312438 TMEM223A0PJW6 202 aa11.66□□□□□ -0.54
CLCF1-201ENST00000312438 PRB2P02812 416 aaPredicted RBP11.66□□□□□ -0.54
CLCF1-201ENST00000312438 HTN3P15516 51 aa11.66□□□□□ -0.54
CLCF1-201ENST00000312438 MPV17L2Q567V2 206 aa11.66□□□□□ -0.54
CLCF1-201ENST00000312438 HIGD1BQ9P298 99 aa11.66□□□□□ -0.54
CLCF1-201ENST00000312438 MYMXA0A1B0GTQ4 84 aa11.65□□□□□ -0.54
CLCF1-201ENST00000312438 K7EIL1 84 aa11.65□□□□□ -0.54
CLCF1-201ENST00000312438 GAGE6Q13070 117 aa11.65□□□□□ -0.54
CLCF1-201ENST00000312438 TIRAPP58753 221 aa11.65□□□□□ -0.55
CLCF1-201ENST00000312438 MRPL23Q16540 153 aaKnown RBP11.65□□□□□ -0.55
CLCF1-201ENST00000312438 DEFB121Q5J5C9 76 aa11.65□□□□□ -0.55
CLCF1-201ENST00000312438 PKD1L1Q8TDX9 2849 aa11.64□□□□□ -0.55
CLCF1-201ENST00000312438 SEC11AP67812 179 aa11.64□□□□□ -0.55
CLCF1-201ENST00000312438 SH2D6Q7Z4S9 175 aa11.64□□□□□ -0.55
CLCF1-201ENST00000312438 GEMIN7Q9H840 131 aaKnown RBP11.64□□□□□ -0.55
CLCF1-201ENST00000312438 A0A096LPF7 62 aa11.63□□□□□ -0.55
CLCF1-201ENST00000312438 FAM19A3Q7Z5A8 133 aa11.63□□□□□ -0.55
CLCF1-201ENST00000312438 SPATA25Q9BR10 227 aa11.63□□□□□ -0.55
CLCF1-201ENST00000312438 LEPROTO15243 131 aa11.63□□□□□ -0.55
CLCF1-201ENST00000312438 COL5A1-AS1Q5SY13 56 aa11.63□□□□□ -0.55
CLCF1-201ENST00000312438 A0A0J9YWU9 116 aa11.62□□□□□ -0.55
CLCF1-201ENST00000312438 BVES-AS1Q5T3Y7 98 aa11.62□□□□□ -0.55
CLCF1-201ENST00000312438 ICOSQ9Y6W8 199 aa11.62□□□□□ -0.55
CLCF1-201ENST00000312438 HERVK_113P63121 156 aa11.61□□□□□ -0.55
CLCF1-201ENST00000312438 HSD52Q0P140 79 aa11.61□□□□□ -0.55
CLCF1-201ENST00000312438 LINC00242Q5T6M2 205 aa11.61□□□□□ -0.55
CLCF1-201ENST00000312438 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 A0A1B0GUV1 79 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 ZNF815PA8K554 130 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 J3QQQ9 107 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 LINC00469Q8N7U9 141 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 PLEKHB2Q96CS7 222 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 TM2D3Q9BRN9 247 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 TMEM262E9PQX1 116 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 H3BNG1 76 aa11.6□□□□□ -0.55
CLCF1-201ENST00000312438 LGALS3P17931 250 aaKnown RBP11.6□□□□□ -0.55
CLCF1-201ENST00000312438 H3BRM9 83 aa11.59□□□□□ -0.55
CLCF1-201ENST00000312438 C11orf45Q8TAV5 145 aa11.59□□□□□ -0.55
CLCF1-201ENST00000312438 IGHV1-58A0A0C4DH39 117 aa11.58□□□□□ -0.56
CLCF1-201ENST00000312438 COX6A2Q02221 97 aa11.58□□□□□ -0.56
CLCF1-201ENST00000312438 Q6ZTC4 211 aa11.58□□□□□ -0.56
CLCF1-201ENST00000312438 MRAPQ8TCY5 172 aa11.58□□□□□ -0.56
CLCF1-201ENST00000312438 CDKN2A-AS1Q9UH64 79 aa11.58□□□□□ -0.56
CLCF1-201ENST00000312438 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.56
CLCF1-201ENST00000312438 IGHV3-64A0A075B6Q5 118 aa11.57□□□□□ -0.56
CLCF1-201ENST00000312438 IGHV3-30-3P0DP02 117 aa11.57□□□□□ -0.56
CLCF1-201ENST00000312438 SCGB1D4Q6XE38 83 aa11.57□□□□□ -0.56
CLCF1-201ENST00000312438 CMYA5Q8N3K9 4069 aa11.56□□□□□ -0.56
CLCF1-201ENST00000312438 RBX1P62877 108 aa11.56□□□□□ -0.56
CLCF1-201ENST00000312438 TAL2Q16559 108 aa11.56□□□□□ -0.56
CLCF1-201ENST00000312438 LELP1Q5T871 98 aa11.56□□□□□ -0.56
CLCF1-201ENST00000312438 ORAOV1Q8WV07 137 aa11.56□□□□□ -0.56
CLCF1-201ENST00000312438 TRAV8-3A0A0A6YYJ7 113 aa11.55□□□□□ -0.56
CLCF1-201ENST00000312438 SPINK8P0C7L1 97 aa11.55□□□□□ -0.56
CLCF1-201ENST00000312438 NANOS2P60321 138 aaKnown RBP11.55□□□□□ -0.56
CLCF1-201ENST00000312438 A0A1B0GV90 55 aa11.54□□□□□ -0.56
CLCF1-201ENST00000312438 DEFB131BA0A096LNP1 70 aa11.53□□□□□ -0.56
CLCF1-201ENST00000312438 LYPD5Q6UWN5 251 aa11.53□□□□□ -0.56
CLCF1-201ENST00000312438 HIST1H4GQ99525 98 aa11.53□□□□□ -0.56
CLCF1-201ENST00000312438 TM2D2Q9BX73 214 aa11.53□□□□□ -0.56
CLCF1-201ENST00000312438 ANK2Q01484 3957 aa11.53□□□□□ -0.56
CLCF1-201ENST00000312438 IGKV3OR2-268A0A0C4DH90 116 aa11.52□□□□□ -0.57
CLCF1-201ENST00000312438 GCSHP23434 173 aa11.52□□□□□ -0.57
CLCF1-201ENST00000312438 CEND1Q8N111 149 aa11.52□□□□□ -0.57
CLCF1-201ENST00000312438 NOTCH1P46531 2555 aa11.51□□□□□ -0.57
CLCF1-201ENST00000312438 LINC00959A0A1B0GUT2 108 aa11.51□□□□□ -0.57
CLCF1-201ENST00000312438 A6NDN8 102 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms