RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 B4DSR2 109 aa9.97□□□□□ -0.81
NPAS4-201ENST00000311034 RPL32P62910 135 aaKnown RBP9.97□□□□□ -0.81
NPAS4-201ENST00000311034 C19orf54Q5BKX5 351 aa9.97□□□□□ -0.81
NPAS4-201ENST00000311034 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
NPAS4-201ENST00000311034 C9orf85Q96MD7 179 aa9.97□□□□□ -0.81
NPAS4-201ENST00000311034 ESM1Q9NQ30 184 aa9.97□□□□□ -0.81
NPAS4-201ENST00000311034 TRBV6-5A0A0K0K1A5 114 aa9.96□□□□□ -0.81
NPAS4-201ENST00000311034 GAGE12JA6NER3 117 aa9.96□□□□□ -0.81
NPAS4-201ENST00000311034 GAGE4Q13068 117 aa9.96□□□□□ -0.81
NPAS4-201ENST00000311034 GAGE7O76087 117 aa9.96□□□□□ -0.82
NPAS4-201ENST00000311034 GAGE12FP0CL80 117 aa9.96□□□□□ -0.82
NPAS4-201ENST00000311034 GAGE12GP0CL81 117 aa9.96□□□□□ -0.82
NPAS4-201ENST00000311034 GAGE12IP0CL82 117 aa9.96□□□□□ -0.82
NPAS4-201ENST00000311034 PLA2G2AP14555 144 aa9.96□□□□□ -0.82
NPAS4-201ENST00000311034 POM121L12Q8N7R1 296 aa9.96□□□□□ -0.82
NPAS4-201ENST00000311034 CLPSL2Q6UWE3 100 aa9.95□□□□□ -0.82
NPAS4-201ENST00000311034 CITED1Q99966 193 aa9.95□□□□□ -0.82
NPAS4-201ENST00000311034 KLK9Q2XQG4 91 aa9.95□□□□□ -0.82
NPAS4-201ENST00000311034 H7C423 109 aa9.95□□□□□ -0.82
NPAS4-201ENST00000311034 NHLRC4P0CG21 123 aaPredicted RBP9.95□□□□□ -0.82
NPAS4-201ENST00000311034 TRGV2A0A075B6R0 118 aa9.94□□□□□ -0.82
NPAS4-201ENST00000311034 TMEM61Q8N0U2 210 aa9.94□□□□□ -0.82
NPAS4-201ENST00000311034 SETXQ7Z333 2677 aaKnown RBP9.94□□□□□ -0.82
NPAS4-201ENST00000311034 TRBV7-9A0A0J9YWB2 115 aa9.94□□□□□ -0.82
NPAS4-201ENST00000311034 A6NDX4 124 aa9.94□□□□□ -0.82
NPAS4-201ENST00000311034 SMIM20Q8N5G0 67 aa9.94□□□□□ -0.82
NPAS4-201ENST00000311034 ODF3Q96PU9 254 aa9.94□□□□□ -0.82
NPAS4-201ENST00000311034 WFDC10AQ9H1F0 79 aa9.94□□□□□ -0.82
NPAS4-201ENST00000311034 OR13C6PQ8NH95 151 aa9.93□□□□□ -0.82
NPAS4-201ENST00000311034 C10orf105Q8TEF2 133 aa9.93□□□□□ -0.82
NPAS4-201ENST00000311034 TRGV11A0A075B6L2 103 aa9.93□□□□□ -0.82
NPAS4-201ENST00000311034 IGHV1-58A0A0C4DH39 117 aa9.93□□□□□ -0.82
NPAS4-201ENST00000311034 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
NPAS4-201ENST00000311034 KRTAP10-9P60411 292 aa9.92□□□□□ -0.82
NPAS4-201ENST00000311034 DEFB130BP0DP73 79 aa9.92□□□□□ -0.82
NPAS4-201ENST00000311034 DEFB130AP0DP74 79 aa9.92□□□□□ -0.82
NPAS4-201ENST00000311034 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
NPAS4-201ENST00000311034 CDKN2A-AS1Q9UH64 79 aa9.92□□□□□ -0.82
NPAS4-201ENST00000311034 Q6ZSN1 163 aa9.91□□□□□ -0.82
NPAS4-201ENST00000311034 LINC00467Q9BRT7 94 aa9.91□□□□□ -0.82
NPAS4-201ENST00000311034 APCP25054 2843 aa9.91□□□□□ -0.82
NPAS4-201ENST00000311034 RBMY1A1P0DJD3 496 aaKnown RBP9.91□□□□□ -0.82
NPAS4-201ENST00000311034 RBMY1CP0DJD4 496 aa9.91□□□□□ -0.82
NPAS4-201ENST00000311034 RBMY1FQ15415 496 aaKnown RBP9.91□□□□□ -0.82
NPAS4-201ENST00000311034 MIAQ16674 131 aa9.91□□□□□ -0.82
NPAS4-201ENST00000311034 UNC79Q9P2D8 2635 aa9.91□□□□□ -0.82
NPAS4-201ENST00000311034 H3BUA1 57 aa9.9□□□□□ -0.82
NPAS4-201ENST00000311034 PFN2P35080 140 aa9.9□□□□□ -0.82
NPAS4-201ENST00000311034 VSIG2Q96IQ7 327 aa9.9□□□□□ -0.82
NPAS4-201ENST00000311034 K7EQG2 157 aa9.9□□□□□ -0.82
NPAS4-201ENST00000311034 IGLV1-40P01703 118 aa9.9□□□□□ -0.82
NPAS4-201ENST00000311034 STHQ8IWL8 128 aa9.9□□□□□ -0.82
NPAS4-201ENST00000311034 LITAFQ99732 161 aa9.9□□□□□ -0.83
NPAS4-201ENST00000311034 Q9H8V8 135 aa9.89□□□□□ -0.83
NPAS4-201ENST00000311034 HIVEP1P15822 2718 aa9.89□□□□□ -0.83
NPAS4-201ENST00000311034 K7EMT4 169 aa9.89□□□□□ -0.83
NPAS4-201ENST00000311034 DEFB4AO15263 64 aa9.89□□□□□ -0.83
NPAS4-201ENST00000311034 HTN3P15516 51 aa9.89□□□□□ -0.83
NPAS4-201ENST00000311034 NBPF19A0A087WUL8 3843 aa9.88□□□□□ -0.83
NPAS4-201ENST00000311034 MRPS36P82909 103 aaKnown RBP9.88□□□□□ -0.83
NPAS4-201ENST00000311034 CIRBPQ14011 172 aaKnown RBP9.88□□□□□ -0.83
NPAS4-201ENST00000311034 PRIMA1Q86XR5 153 aa9.88□□□□□ -0.83
NPAS4-201ENST00000311034 NOTCH1P46531 2555 aa9.88□□□□□ -0.83
NPAS4-201ENST00000311034 SVIPQ8NHG7 77 aa9.88□□□□□ -0.83
NPAS4-201ENST00000311034 UBE2L6O14933 153 aa9.87□□□□□ -0.83
NPAS4-201ENST00000311034 Q96MF0 132 aa9.87□□□□□ -0.83
NPAS4-201ENST00000311034 NOP10Q9NPE3 64 aaKnown RBP9.87□□□□□ -0.83
NPAS4-201ENST00000311034 YAE1D1Q9NRH1 226 aa9.87□□□□□ -0.83
NPAS4-201ENST00000311034 MGAM2Q2M2H8 2515 aa9.87□□□□□ -0.83
NPAS4-201ENST00000311034 PSMB8P28062 276 aa9.85□□□□□ -0.83
NPAS4-201ENST00000311034 UBE2D4Q9Y2X8 147 aa9.85□□□□□ -0.83
NPAS4-201ENST00000311034 FAM236AA0A1B0GUQ0 79 aa9.85□□□□□ -0.83
NPAS4-201ENST00000311034 FAM236BA0A1B0GV22 79 aa9.85□□□□□ -0.83
NPAS4-201ENST00000311034 H3BT86 120 aa9.85□□□□□ -0.83
NPAS4-201ENST00000311034 LST1O00453 97 aa9.85□□□□□ -0.83
NPAS4-201ENST00000311034 HERV-K104P63124 156 aa9.85□□□□□ -0.83
NPAS4-201ENST00000311034 COX6A2Q02221 97 aa9.85□□□□□ -0.83
NPAS4-201ENST00000311034 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 FAM104AQ969W3 186 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 TMEM101Q96IK0 257 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 CHCHD7Q9BUK0 85 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 LINC00158P58513 81 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 ZNF415Q09FC8 603 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 C5orf38Q86SI9 138 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 SPANXDQ9BXN6 97 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 Q9HAA7 133 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 SPANXCQ9NY87 97 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 PIK3CD-AS1Q5SR53 167 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 LINC01356Q8N9X3 169 aa9.84□□□□□ -0.83
NPAS4-201ENST00000311034 LOC100131303A0A0U1RQF7 123 aa9.83□□□□□ -0.84
NPAS4-201ENST00000311034 Q6ZTI0 123 aa9.83□□□□□ -0.84
NPAS4-201ENST00000311034 PYGO1Q9Y3Y4 419 aa9.83□□□□□ -0.84
NPAS4-201ENST00000311034 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.83□□□□□ -0.84
NPAS4-201ENST00000311034 SPANXA1Q9NS26 97 aa9.83□□□□□ -0.84
NPAS4-201ENST00000311034 TRGV4A0A0C4DH28 118 aa9.82□□□□□ -0.84
NPAS4-201ENST00000311034 WFDC11Q8NEX6 87 aa9.82□□□□□ -0.84
NPAS4-201ENST00000311034 Q8N2B8 174 aa9.82□□□□□ -0.84
NPAS4-201ENST00000311034 LINC00308Q8TCZ7 52 aa9.82□□□□□ -0.84
NPAS4-201ENST00000311034 PDZD2O15018 2839 aa9.82□□□□□ -0.84
NPAS4-201ENST00000311034 GAGE2AQ6NT46 116 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms