RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 UPK3BQ9BT76 320 aa13.75□□□□□ -0.21
UBXN2A-201ENST00000309033 DSCAMO60469 2012 aa13.75□□□□□ -0.21
UBXN2A-201ENST00000309033 TRIAP1O43715 76 aa13.74□□□□□ -0.21
UBXN2A-201ENST00000309033 SDIM1Q6ZPB5 146 aa13.74□□□□□ -0.21
UBXN2A-201ENST00000309033 HILS1P60008 231 aa13.74□□□□□ -0.21
UBXN2A-201ENST00000309033 SCXQ7RTU7 201 aa13.74□□□□□ -0.21
UBXN2A-201ENST00000309033 TSHBP01222 138 aa13.73□□□□□ -0.21
UBXN2A-201ENST00000309033 FAM19A1Q7Z5A9 133 aa13.73□□□□□ -0.21
UBXN2A-201ENST00000309033 NRACQ8N912 160 aa13.73□□□□□ -0.21
UBXN2A-201ENST00000309033 FAM19A5Q7Z5A7 132 aaPredicted RBP13.73□□□□□ -0.21
UBXN2A-201ENST00000309033 LINC00526Q96FQ7 95 aa13.73□□□□□ -0.21
UBXN2A-201ENST00000309033 TRBV6-4A0A1B0GX49 114 aa13.73□□□□□ -0.21
UBXN2A-201ENST00000309033 MT-ATP8P03928 68 aa13.73□□□□□ -0.21
UBXN2A-201ENST00000309033 ACACBO00763 2458 aa13.73□□□□□ -0.21
UBXN2A-201ENST00000309033 CSPG4Q6UVK1 2322 aa13.72□□□□□ -0.21
UBXN2A-201ENST00000309033 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.72□□□□□ -0.21
UBXN2A-201ENST00000309033 LINC00643Q86TS7 51 aa13.72□□□□□ -0.21
UBXN2A-201ENST00000309033 SPANXB1Q9NS25 103 aaPredicted RBP13.72□□□□□ -0.21
UBXN2A-201ENST00000309033 LINC01006Q8NI28 216 aa13.71□□□□□ -0.21
UBXN2A-201ENST00000309033 EDN2P20800 178 aa13.71□□□□□ -0.21
UBXN2A-201ENST00000309033 TRBV27A0A0K0K1C4 114 aa13.71□□□□□ -0.21
UBXN2A-201ENST00000309033 BPY2O14599 106 aa13.71□□□□□ -0.22
UBXN2A-201ENST00000309033 LRCOL1A6NCL2 159 aa13.7□□□□□ -0.22
UBXN2A-201ENST00000309033 IBA57-AS1B1ANH7 110 aa13.7□□□□□ -0.22
UBXN2A-201ENST00000309033 C14orf177Q52M58 125 aa13.7□□□□□ -0.22
UBXN2A-201ENST00000309033 MIFP14174 115 aa13.7□□□□□ -0.22
UBXN2A-201ENST00000309033 A0A087WZ39 114 aa13.7□□□□□ -0.22
UBXN2A-201ENST00000309033 PDE6GP18545 87 aa13.7□□□□□ -0.22
UBXN2A-201ENST00000309033 NOTCH2Q04721 2471 aa13.69□□□□□ -0.22
UBXN2A-201ENST00000309033 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
UBXN2A-201ENST00000309033 RBX1P62877 108 aa13.67□□□□□ -0.22
UBXN2A-201ENST00000309033 J3KT08 172 aa13.67□□□□□ -0.22
UBXN2A-201ENST00000309033 KLLNB2CW77 178 aa13.67□□□□□ -0.22
UBXN2A-201ENST00000309033 AVPP01185 164 aa13.66□□□□□ -0.22
UBXN2A-201ENST00000309033 TRBV6-5A0A0K0K1A5 114 aa13.66□□□□□ -0.22
UBXN2A-201ENST00000309033 C6orf99Q4VX62 202 aa13.66□□□□□ -0.22
UBXN2A-201ENST00000309033 UBE2D4Q9Y2X8 147 aa13.65□□□□□ -0.22
UBXN2A-201ENST00000309033 IGKV4-1P06312 121 aa13.65□□□□□ -0.22
UBXN2A-201ENST00000309033 ENHOQ6UWT2 76 aa13.65□□□□□ -0.22
UBXN2A-201ENST00000309033 IGKV2-28A0A075B6P5 120 aa13.65□□□□□ -0.22
UBXN2A-201ENST00000309033 IGKV2D-28P01615 120 aa13.65□□□□□ -0.22
UBXN2A-201ENST00000309033 IL17DQ8TAD2 202 aa13.65□□□□□ -0.22
UBXN2A-201ENST00000309033 PYGO1Q9Y3Y4 419 aa13.65□□□□□ -0.22
UBXN2A-201ENST00000309033 PLXNB1O43157 2135 aa13.64□□□□□ -0.23
UBXN2A-201ENST00000309033 WNK1Q9H4A3 2382 aa13.64□□□□□ -0.23
UBXN2A-201ENST00000309033 SHISA2Q6UWI4 295 aa13.64□□□□□ -0.23
UBXN2A-201ENST00000309033 CLUHP3Q96NS8 147 aa13.64□□□□□ -0.23
UBXN2A-201ENST00000309033 PTPN13Q12923 2485 aa13.64□□□□□ -0.23
UBXN2A-201ENST00000309033 C2orf91Q6ZV80 131 aa13.64□□□□□ -0.23
UBXN2A-201ENST00000309033 C9orf85Q96MD7 179 aa13.64□□□□□ -0.23
UBXN2A-201ENST00000309033 IGLV2-18A0A075B6J9 118 aa13.63□□□□□ -0.23
UBXN2A-201ENST00000309033 TRBV30A0A0K0K1B3 111 aa13.63□□□□□ -0.23
UBXN2A-201ENST00000309033 SYCNQ0VAF6 134 aa13.63□□□□□ -0.23
UBXN2A-201ENST00000309033 NDUFV3P56181 108 aaKnown RBP13.62□□□□□ -0.23
UBXN2A-201ENST00000309033 HCFC1P51610 2035 aa13.62□□□□□ -0.23
UBXN2A-201ENST00000309033 C10orf142B7Z368 130 aa13.61□□□□□ -0.23
UBXN2A-201ENST00000309033 KPRPQ5T749 579 aaPredicted RBP13.6□□□□□ -0.23
UBXN2A-201ENST00000309033 LINC00959A0A1B0GUT2 108 aa13.6□□□□□ -0.23
UBXN2A-201ENST00000309033 MRPS12O15235 138 aaKnown RBP13.6□□□□□ -0.23
UBXN2A-201ENST00000309033 SMR3AQ99954 134 aa13.6□□□□□ -0.23
UBXN2A-201ENST00000309033 POLR2KP53803 58 aaKnown RBP13.6□□□□□ -0.23
UBXN2A-201ENST00000309033 C20orf197Q8N268 126 aa13.6□□□□□ -0.23
UBXN2A-201ENST00000309033 ATG2AQ2TAZ0 1938 aa13.6□□□□□ -0.23
UBXN2A-201ENST00000309033 C1orf158Q8N1D5 194 aa13.59□□□□□ -0.23
UBXN2A-201ENST00000309033 M0R2N4 97 aa13.59□□□□□ -0.23
UBXN2A-201ENST00000309033 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.59□□□□□ -0.23
UBXN2A-201ENST00000309033 CD164L2Q6UWJ8 174 aa13.59□□□□□ -0.23
UBXN2A-201ENST00000309033 C3orf84H3BNL1 204 aa13.58□□□□□ -0.23
UBXN2A-201ENST00000309033 UBE2D1P51668 147 aa13.58□□□□□ -0.24
UBXN2A-201ENST00000309033 TRAV10A0A0B4J240 114 aa13.58□□□□□ -0.24
UBXN2A-201ENST00000309033 KRTAP10-9P60411 292 aa13.57□□□□□ -0.24
UBXN2A-201ENST00000309033 PPDPFQ9H3Y8 114 aa13.57□□□□□ -0.24
UBXN2A-201ENST00000309033 WFDC10BQ8IUB3 73 aa13.57□□□□□ -0.24
UBXN2A-201ENST00000309033 CCKP06307 115 aa13.56□□□□□ -0.24
UBXN2A-201ENST00000309033 LRP4O75096 1905 aa13.56□□□□□ -0.24
UBXN2A-201ENST00000309033 PTPRSQ13332 1948 aa13.55□□□□□ -0.24
UBXN2A-201ENST00000309033 ARHGAP32A7KAX9 2087 aa13.55□□□□□ -0.24
UBXN2A-201ENST00000309033 RPL37AP8A6NKH3 93 aa13.55□□□□□ -0.24
UBXN2A-201ENST00000309033 NDUFA7O95182 113 aa13.54□□□□□ -0.24
UBXN2A-201ENST00000309033 SMIM11BQ8TCY0 68 aa13.54□□□□□ -0.24
UBXN2A-201ENST00000309033 NDUFC2O95298 119 aa13.54□□□□□ -0.24
UBXN2A-201ENST00000309033 NANOS2P60321 138 aaKnown RBP13.54□□□□□ -0.24
UBXN2A-201ENST00000309033 LELP1Q5T871 98 aa13.54□□□□□ -0.24
UBXN2A-201ENST00000309033 POM121L12Q8N7R1 296 aa13.54□□□□□ -0.24
UBXN2A-201ENST00000309033 TIMM17BO60830 172 aa13.53□□□□□ -0.24
UBXN2A-201ENST00000309033 OXLD1Q5BKU9 147 aa13.53□□□□□ -0.24
UBXN2A-201ENST00000309033 Q6ZQY7 126 aa13.53□□□□□ -0.24
UBXN2A-201ENST00000309033 EP400Q96L91 3159 aa13.53□□□□□ -0.24
UBXN2A-201ENST00000309033 MRPS36P82909 103 aaKnown RBP13.52□□□□□ -0.24
UBXN2A-201ENST00000309033 UBE2D3P61077 147 aa13.52□□□□□ -0.25
UBXN2A-201ENST00000309033 UBE2D2P62837 147 aa13.52□□□□□ -0.25
UBXN2A-201ENST00000309033 LINC00310P59036 64 aa13.52□□□□□ -0.25
UBXN2A-201ENST00000309033 SONP18583 2426 aaKnown RBP13.52□□□□□ -0.25
UBXN2A-201ENST00000309033 HRCT1Q6UXD1 115 aa13.51□□□□□ -0.25
UBXN2A-201ENST00000309033 HIVEP3Q5T1R4 2406 aa13.51□□□□□ -0.25
UBXN2A-201ENST00000309033 A0A0J9YWU9 116 aa13.51□□□□□ -0.25
UBXN2A-201ENST00000309033 CRIP2P52943 208 aaPredicted RBP13.51□□□□□ -0.25
UBXN2A-201ENST00000309033 MPLKIPQ8TAP9 179 aa13.51□□□□□ -0.25
UBXN2A-201ENST00000309033 URB1-AS1Q96HZ7 61 aa13.51□□□□□ -0.25
UBXN2A-201ENST00000309033 CDC42SE2Q9NRR3 84 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms