RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 K7EP13 123 aa6.72□□□□□ -1.33
PTPRE-202ENST00000306042 Q6ZUT4 128 aa6.72□□□□□ -1.33
PTPRE-202ENST00000306042 TOMM6Q96B49 74 aa6.72□□□□□ -1.33
PTPRE-202ENST00000306042 LOC100131303A0A0U1RQF7 123 aa6.72□□□□□ -1.33
PTPRE-202ENST00000306042 SCRT2Q9NQ03 307 aa6.72□□□□□ -1.33
PTPRE-202ENST00000306042 TEP1Q99973 2627 aaKnown RBP6.72□□□□□ -1.33
PTPRE-202ENST00000306042 CHD6Q8TD26 2715 aa6.72□□□□□ -1.33
PTPRE-202ENST00000306042 SOCS3O14543 225 aa6.72□□□□□ -1.33
PTPRE-202ENST00000306042 H3BUT2 72 aa6.72□□□□□ -1.33
PTPRE-202ENST00000306042 MIAQ16674 131 aa6.72□□□□□ -1.33
PTPRE-202ENST00000306042 LINC00467Q9BRT7 94 aa6.72□□□□□ -1.33
PTPRE-202ENST00000306042 ETDCA0A1B0GVM5 59 aa6.71□□□□□ -1.33
PTPRE-202ENST00000306042 ATXN8Q156A1 80 aa6.71□□□□□ -1.33
PTPRE-202ENST00000306042 SNHG12Q9BXW3 62 aa6.71□□□□□ -1.33
PTPRE-202ENST00000306042 PIK3CD-AS1Q5SR53 167 aa6.71□□□□□ -1.33
PTPRE-202ENST00000306042 XIRP2A4UGR9 3374 aa6.71□□□□□ -1.34
PTPRE-202ENST00000306042 TAL2Q16559 108 aa6.71□□□□□ -1.34
PTPRE-202ENST00000306042 OPRPNQ99935 248 aaPredicted RBP6.71□□□□□ -1.34
PTPRE-202ENST00000306042 SPCS1Q9Y6A9 102 aa6.71□□□□□ -1.34
PTPRE-202ENST00000306042 CRYBA4P53673 196 aa6.7□□□□□ -1.34
PTPRE-202ENST00000306042 RBX1P62877 108 aa6.7□□□□□ -1.34
PTPRE-202ENST00000306042 WFDC9Q8NEX5 89 aa6.7□□□□□ -1.34
PTPRE-202ENST00000306042 TRAV8-4A0A0B4J246 113 aa6.7□□□□□ -1.34
PTPRE-202ENST00000306042 BAALCQ8WXS3 180 aa6.7□□□□□ -1.34
PTPRE-202ENST00000306042 TRAV13-2A0A0B4J235 113 aa6.7□□□□□ -1.34
PTPRE-202ENST00000306042 A0A1B0GXF2 115 aa6.7□□□□□ -1.34
PTPRE-202ENST00000306042 UBE2AP49459 152 aa6.7□□□□□ -1.34
PTPRE-202ENST00000306042 IGHV4-4A0A075B6R2 117 aa6.69□□□□□ -1.34
PTPRE-202ENST00000306042 KRTAP1-1Q07627 177 aa6.69□□□□□ -1.34
PTPRE-202ENST00000306042 A0A1B0GWB2 263 aa6.69□□□□□ -1.34
PTPRE-202ENST00000306042 LECT2O14960 151 aa6.69□□□□□ -1.34
PTPRE-202ENST00000306042 SCGB1A1P11684 91 aa6.69□□□□□ -1.34
PTPRE-202ENST00000306042 RNASE8Q8TDE3 154 aaKnown RBP6.69□□□□□ -1.34
PTPRE-202ENST00000306042 IGHV1-58A0A0C4DH39 117 aa6.69□□□□□ -1.34
PTPRE-202ENST00000306042 UBE2D1P51668 147 aa6.69□□□□□ -1.34
PTPRE-202ENST00000306042 CHCHD7Q9BUK0 85 aa6.69□□□□□ -1.34
PTPRE-202ENST00000306042 SBSPONQ8IVN8 264 aa6.68□□□□□ -1.34
PTPRE-202ENST00000306042 A0A1B0GV72 72 aa6.68□□□□□ -1.34
PTPRE-202ENST00000306042 PRSS47A8MTI9 375 aa6.68□□□□□ -1.34
PTPRE-202ENST00000306042 TRAV12-1A0A0B4J245 112 aa6.68□□□□□ -1.34
PTPRE-202ENST00000306042 SETXQ7Z333 2677 aaKnown RBP6.68□□□□□ -1.34
PTPRE-202ENST00000306042 COL6A3P12111 3177 aa6.67□□□□□ -1.34
PTPRE-202ENST00000306042 TRBV6-5A0A0K0K1A5 114 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 CARD19Q96LW7 228 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 MPV17L2Q567V2 206 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 UNC79Q9P2D8 2635 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 TRBV27A0A0K0K1C4 114 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 UBE2D3P61077 147 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 UBE2D2P62837 147 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 PYY3Q5JQD4 70 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 SAMD5Q5TGI4 173 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 SND1-IT1Q9HBX3 110 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 FAM229AH3BQW9 127 aa6.66□□□□□ -1.34
PTPRE-202ENST00000306042 C11orf86A6NJI1 115 aa6.65□□□□□ -1.34
PTPRE-202ENST00000306042 SYCNQ0VAF6 134 aa6.65□□□□□ -1.34
PTPRE-202ENST00000306042 FHL2Q14192 279 aa6.65□□□□□ -1.35
PTPRE-202ENST00000306042 UFSP1Q6NVU6 142 aa6.65□□□□□ -1.35
PTPRE-202ENST00000306042 LINC00173Q6ZV60 143 aa6.65□□□□□ -1.35
PTPRE-202ENST00000306042 K7ERU9 68 aa6.65□□□□□ -1.35
PTPRE-202ENST00000306042 COX8AP10176 69 aa6.65□□□□□ -1.35
PTPRE-202ENST00000306042 TINCRA0A1B0GVN0 87 aa6.64□□□□□ -1.35
PTPRE-202ENST00000306042 C21orf62-AS1Q17RA5 79 aa6.64□□□□□ -1.35
PTPRE-202ENST00000306042 IFITM1P13164 125 aa6.64□□□□□ -1.35
PTPRE-202ENST00000306042 RNF185Q96GF1 192 aa6.64□□□□□ -1.35
PTPRE-202ENST00000306042 MDFIQ99750 246 aa6.64□□□□□ -1.35
PTPRE-202ENST00000306042 NAA38Q9BRA0 125 aaKnown RBP6.64□□□□□ -1.35
PTPRE-202ENST00000306042 ZNF706Q9Y5V0 76 aaPredicted RBP6.64□□□□□ -1.35
PTPRE-202ENST00000306042 AGRNO00468 2067 aa6.63□□□□□ -1.35
PTPRE-202ENST00000306042 IGLV4-3A0A075B6K6 122 aa6.63□□□□□ -1.35
PTPRE-202ENST00000306042 CD164L2Q6UWJ8 174 aa6.63□□□□□ -1.35
PTPRE-202ENST00000306042 DEFB105AQ8NG35 78 aa6.63□□□□□ -1.35
PTPRE-202ENST00000306042 A0A087WZ39 114 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 CDKN2A-AS1Q9UH64 79 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 CELA1Q9UNI1 258 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 NCR3O14931 201 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 TSHBP01222 138 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 MAJINQ3KP22 176 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 LINC01545Q5VT33 79 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 C2orf82Q6UX34 121 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 POM121L12Q8N7R1 296 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 DAND5Q8N907 189 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 PRO1854Q9UHT4 67 aa6.62□□□□□ -1.35
PTPRE-202ENST00000306042 IGLV5-52A0A0A0MRZ9 124 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 LRCOL1A6NCL2 159 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 C12orf74Q32Q52 190 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 H3BQ85 93 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 RPL32P62910 135 aaKnown RBP6.61□□□□□ -1.35
PTPRE-202ENST00000306042 BPTFQ12830 3046 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 LINC00959A0A1B0GUT2 108 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 NUPR1O60356 82 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 COA6Q5JTJ3 125 aaKnown RBP6.61□□□□□ -1.35
PTPRE-202ENST00000306042 LINC00336Q6ZUF6 198 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 Q6ZVH6 145 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 PCP2Q8IVA1 136 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 CNFNQ9BYD5 112 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 PYGO1Q9Y3Y4 419 aa6.61□□□□□ -1.35
PTPRE-202ENST00000306042 POLR2KP53803 58 aaKnown RBP6.6□□□□□ -1.35
PTPRE-202ENST00000306042 KRTAP21-3Q3LHN1 58 aa6.6□□□□□ -1.35
PTPRE-202ENST00000306042 BVES-AS1Q5T3Y7 98 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms