RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ZNF22P17026 224 aaPredicted RBP4.64□□□□□ -1.67
USP47-201ENST00000305481 GAGE4Q13068 117 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 GAGE5Q13069 117 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 FHL2Q14192 279 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 GAGE13Q4V321 117 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 TM2D2Q9BX73 214 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 SPANXA1Q9NS26 97 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 CMYA5Q8N3K9 4069 aa4.64□□□□□ -1.67
USP47-201ENST00000305481 K7ERU9 68 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 GCSHP23434 173 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 MRPS36P82909 103 aaKnown RBP4.63□□□□□ -1.67
USP47-201ENST00000305481 RPL36AP83881 106 aaKnown RBP4.63□□□□□ -1.67
USP47-201ENST00000305481 AMMECR1LQ6DCA0 310 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 Q6ZUT4 128 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 CEND1Q8N111 149 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 RPL36ALQ969Q0 106 aaKnown RBP4.63□□□□□ -1.67
USP47-201ENST00000305481 ZNF815PA8K554 130 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 PKD1L1Q8TDX9 2849 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 TRBV6-4A0A1B0GX49 114 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 WIPF1O43516 503 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 DAZ4Q86SG3 579 aaKnown RBP4.63□□□□□ -1.67
USP47-201ENST00000305481 SBSPONQ8IVN8 264 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 LINC00612Q8N6U2 182 aa4.63□□□□□ -1.67
USP47-201ENST00000305481 DAZ3Q9NR90 486 aaKnown RBP4.63□□□□□ -1.67
USP47-201ENST00000305481 ANK2Q01484 3957 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 A6NDN8 102 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 CYSRT1A8MQ03 144 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 TSPAN13O95857 204 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 HERVK_113P61574 105 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 KRTAP24-1Q3LI83 254 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 KIR2DL5BQ8NHK3 375 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 H3BRM9 83 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 DEFB130BP0DP73 79 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 DEFB130AP0DP74 79 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 TIMM21Q9BVV7 248 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 STAB1Q9NY15 2570 aa4.62□□□□□ -1.67
USP47-201ENST00000305481 IGHV3-64A0A075B6Q5 118 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 TRGV4A0A0C4DH28 118 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 J3QQQ9 107 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 TAL2Q16559 108 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 GEMIN7Q9H840 131 aaKnown RBP4.61□□□□□ -1.67
USP47-201ENST00000305481 A0A0J9YY99 117 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 K7ERJ3 54 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 UBE2D1P51668 147 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 DEFB135Q30KP9 77 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 HIST1H4GQ99525 98 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 TINCRA0A1B0GVN0 87 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 SMIM9A6NGZ8 99 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 C9orf118A6NHY6 69 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 LEPROTO15243 131 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 RAB37Q96AX2 223 aa4.61□□□□□ -1.67
USP47-201ENST00000305481 BAHCC1Q9P281 2608 aa4.6□□□□□ -1.67
USP47-201ENST00000305481 TRAV8-3A0A0A6YYJ7 113 aa4.6□□□□□ -1.67
USP47-201ENST00000305481 DEFB4AO15263 64 aa4.6□□□□□ -1.67
USP47-201ENST00000305481 COX6A2Q02221 97 aa4.6□□□□□ -1.67
USP47-201ENST00000305481 SCGB1D4Q6XE38 83 aa4.6□□□□□ -1.67
USP47-201ENST00000305481 CSDC2Q9Y534 153 aaKnown RBP4.6□□□□□ -1.67
USP47-201ENST00000305481 SMIM13P0DJ93 91 aa4.6□□□□□ -1.67
USP47-201ENST00000305481 IGHV3-30-3P0DP02 117 aa4.6□□□□□ -1.67
USP47-201ENST00000305481 OR5A1Q8NGJ0 315 aa4.6□□□□□ -1.67
USP47-201ENST00000305481 NHP2Q9NX24 153 aaKnown RBP4.6□□□□□ -1.67
USP47-201ENST00000305481 A8MZ25 164 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 H3BUT2 72 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 IGHV4-30-4P0DP06 118 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 FAM222AQ5U5X8 452 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 PPDPFQ9H3Y8 114 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 CDC42SE2Q9NRR3 84 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 LGALS3P17931 250 aaKnown RBP4.59□□□□□ -1.67
USP47-201ENST00000305481 APOC4P55056 127 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 OXLD1Q5BKU9 147 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 DGAT2L7PQ6IED9 249 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 C10orf126Q8N4M7 172 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 CDKN2A-AS1Q9UH64 79 aa4.59□□□□□ -1.67
USP47-201ENST00000305481 IGLV5-45A0A087WSX0 123 aa4.59□□□□□ -1.68
USP47-201ENST00000305481 IGHV4-28A0A0C4DH34 117 aa4.59□□□□□ -1.68
USP47-201ENST00000305481 KRTAP10-11P60412 298 aa4.59□□□□□ -1.68
USP47-201ENST00000305481 C12orf74Q32Q52 190 aa4.59□□□□□ -1.68
USP47-201ENST00000305481 LINC00242Q5T6M2 205 aa4.59□□□□□ -1.68
USP47-201ENST00000305481 RNF183Q96D59 192 aa4.59□□□□□ -1.68
USP47-201ENST00000305481 IGHV1-58A0A0C4DH39 117 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 A0A1B0GWB2 263 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 SPINK8P0C7L1 97 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 TIRAPP58753 221 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 PRIMA1Q86XR5 153 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 Q8NAQ8 132 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 VSIG2Q96IQ7 327 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 TMEM243Q9BU79 118 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 TRBV6-8A0A0A6YYG3 113 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 B5MCH6 92 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 FAM19A3Q7Z5A8 133 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 SPANXB1Q9NS25 103 aaPredicted RBP4.58□□□□□ -1.68
USP47-201ENST00000305481 MAST4O15021 2626 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 IGHV3-30P01768 117 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 IGHV3-30-5P0DP03 117 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 SRSF9Q13242 221 aaKnown RBP eCLIP4.58□□□□□ -1.68
USP47-201ENST00000305481 SIGMAR1Q99720 223 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 CELA1Q9UNI1 258 aa4.58□□□□□ -1.68
USP47-201ENST00000305481 DNAH3Q8TD57 4116 aa4.57□□□□□ -1.68
USP47-201ENST00000305481 A0A1W2PPM0 123 aa4.57□□□□□ -1.68
USP47-201ENST00000305481 LYRM9A8MSI8 78 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms