RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 TRAV13-1A0A0B4J241 112 aa9.81□□□□□ -0.84
CTTN-201ENST00000301843 DGAT2L7PQ6IED9 249 aa9.81□□□□□ -0.84
CTTN-201ENST00000301843 PRB1P04280 392 aa9.81□□□□□ -0.84
CTTN-201ENST00000301843 A0A096LNT2 108 aa9.8□□□□□ -0.84
CTTN-201ENST00000301843 H7C423 109 aa9.8□□□□□ -0.84
CTTN-201ENST00000301843 LINC00694P0DN24 101 aa9.8□□□□□ -0.84
CTTN-201ENST00000301843 ZNF702PQ9H963 129 aa9.8□□□□□ -0.84
CTTN-201ENST00000301843 APCP25054 2843 aa9.8□□□□□ -0.84
CTTN-201ENST00000301843 TMEM89A2RUT3 159 aa9.8□□□□□ -0.84
CTTN-201ENST00000301843 ODF3Q96PU9 254 aa9.8□□□□□ -0.84
CTTN-201ENST00000301843 IGKV3OR2-268A0A0C4DH90 116 aa9.8□□□□□ -0.84
CTTN-201ENST00000301843 B5MCH6 92 aa9.8□□□□□ -0.84
CTTN-201ENST00000301843 SNCGO76070 127 aa9.8□□□□□ -0.84
CTTN-201ENST00000301843 TRAV8-4A0A0B4J246 113 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 C15orf53Q8NAA6 179 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 UBE2WQ96B02 151 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 MIAQ16674 131 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 C3orf56Q8N813 242 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 Q9H8V8 135 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 VPREB3Q9UKI3 123 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 TRGV1A0A0A0MS02 117 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 J3QLI3 93 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 GAGE2BQ13066 116 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 GAGE2EQ4V326 116 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 TMEM101Q96IK0 257 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 GAGE2DQ9UEU5 116 aa9.78□□□□□ -0.84
CTTN-201ENST00000301843 USP24Q9UPU5 2620 aa9.77□□□□□ -0.84
CTTN-201ENST00000301843 TRBV10-2A0A0K0K1G8 114 aa9.77□□□□□ -0.85
CTTN-201ENST00000301843 SVIPQ8NHG7 77 aa9.77□□□□□ -0.85
CTTN-201ENST00000301843 DYNLRB2Q8TF09 96 aa9.77□□□□□ -0.85
CTTN-201ENST00000301843 KRTAP10-9P60411 292 aa9.77□□□□□ -0.85
CTTN-201ENST00000301843 MAP6D1Q9H9H5 199 aa9.77□□□□□ -0.85
CTTN-201ENST00000301843 NHLRC4P0CG21 123 aaPredicted RBP9.76□□□□□ -0.85
CTTN-201ENST00000301843 ZNF415Q09FC8 603 aa9.76□□□□□ -0.85
CTTN-201ENST00000301843 Q8N2B8 174 aa9.76□□□□□ -0.85
CTTN-201ENST00000301843 PYGO1Q9Y3Y4 419 aa9.76□□□□□ -0.85
CTTN-201ENST00000301843 TRBV30A0A0K0K1B3 111 aa9.76□□□□□ -0.85
CTTN-201ENST00000301843 PLA2G2AP14555 144 aa9.76□□□□□ -0.85
CTTN-201ENST00000301843 CITED1Q99966 193 aa9.76□□□□□ -0.85
CTTN-201ENST00000301843 TMEM262E9PQX1 116 aa9.76□□□□□ -0.85
CTTN-201ENST00000301843 TINCRA0A1B0GVN0 87 aa9.75□□□□□ -0.85
CTTN-201ENST00000301843 CCDC179H3BU77 68 aa9.75□□□□□ -0.85
CTTN-201ENST00000301843 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
CTTN-201ENST00000301843 CITED2Q99967 270 aaPredicted RBP9.74□□□□□ -0.85
CTTN-201ENST00000301843 GAGE12JA6NER3 117 aa9.74□□□□□ -0.85
CTTN-201ENST00000301843 GAGE4Q13068 117 aa9.74□□□□□ -0.85
CTTN-201ENST00000301843 GAGE5Q13069 117 aa9.74□□□□□ -0.85
CTTN-201ENST00000301843 SOSTDC1Q6X4U4 206 aa9.74□□□□□ -0.85
CTTN-201ENST00000301843 Q6ZTI0 123 aa9.74□□□□□ -0.85
CTTN-201ENST00000301843 FSHBP01225 129 aa9.73□□□□□ -0.85
CTTN-201ENST00000301843 COX6CP09669 75 aa9.73□□□□□ -0.85
CTTN-201ENST00000301843 MEIG1Q5JSS6 88 aa9.73□□□□□ -0.85
CTTN-201ENST00000301843 PIK3CD-AS1Q5SR53 167 aa9.73□□□□□ -0.85
CTTN-201ENST00000301843 Q6YL49 198 aa9.73□□□□□ -0.85
CTTN-201ENST00000301843 WFDC10AQ9H1F0 79 aa9.73□□□□□ -0.85
CTTN-201ENST00000301843 SPANXDQ9BXN6 97 aa9.73□□□□□ -0.85
CTTN-201ENST00000301843 SPANXCQ9NY87 97 aa9.73□□□□□ -0.85
CTTN-201ENST00000301843 CR1P17927 2039 aa9.72□□□□□ -0.85
CTTN-201ENST00000301843 NDUFV3P56181 108 aaKnown RBP9.72□□□□□ -0.85
CTTN-201ENST00000301843 LINC00242Q5T6M2 205 aa9.72□□□□□ -0.85
CTTN-201ENST00000301843 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
CTTN-201ENST00000301843 LOC100131303A0A0U1RQF7 123 aa9.72□□□□□ -0.85
CTTN-201ENST00000301843 PRIMA1Q86XR5 153 aa9.71□□□□□ -0.86
CTTN-201ENST00000301843 LINC00308Q8TCZ7 52 aa9.71□□□□□ -0.86
CTTN-201ENST00000301843 IGHV4-31P0DP07 118 aa9.71□□□□□ -0.86
CTTN-201ENST00000301843 NTM-AS1Q6ZSK4 140 aa9.71□□□□□ -0.86
CTTN-201ENST00000301843 TOMM7Q9P0U1 55 aa9.71□□□□□ -0.86
CTTN-201ENST00000301843 HIVEP2P31629 2446 aa9.7□□□□□ -0.86
CTTN-201ENST00000301843 LST1O00453 97 aa9.7□□□□□ -0.86
CTTN-201ENST00000301843 RNF152Q8N8N0 203 aa9.7□□□□□ -0.86
CTTN-201ENST00000301843 INSP01308 110 aa9.7□□□□□ -0.86
CTTN-201ENST00000301843 ODF3L2Q3SX64 289 aa9.7□□□□□ -0.86
CTTN-201ENST00000301843 DEFB114Q30KQ6 69 aa9.69□□□□□ -0.86
CTTN-201ENST00000301843 C1orf158Q8N1D5 194 aa9.69□□□□□ -0.86
CTTN-201ENST00000301843 Q9HAA7 133 aa9.69□□□□□ -0.86
CTTN-201ENST00000301843 NOP10Q9NPE3 64 aaKnown RBP9.69□□□□□ -0.86
CTTN-201ENST00000301843 STHQ8IWL8 128 aa9.68□□□□□ -0.86
CTTN-201ENST00000301843 CHCHD5Q9BSY4 110 aa9.68□□□□□ -0.86
CTTN-201ENST00000301843 IFITM1P13164 125 aa9.68□□□□□ -0.86
CTTN-201ENST00000301843 Q96MF0 132 aa9.68□□□□□ -0.86
CTTN-201ENST00000301843 C11orf68Q9H3H3 251 aaKnown RBP9.68□□□□□ -0.86
CTTN-201ENST00000301843 SMIM1B2RUZ4 78 aa9.67□□□□□ -0.86
CTTN-201ENST00000301843 NDUFA1O15239 70 aa9.67□□□□□ -0.86
CTTN-201ENST00000301843 ITPR2Q14571 2701 aa9.67□□□□□ -0.86
CTTN-201ENST00000301843 NOTCH2Q04721 2471 aa9.67□□□□□ -0.86
CTTN-201ENST00000301843 VWFP04275 2813 aa9.67□□□□□ -0.86
CTTN-201ENST00000301843 RS1O15537 224 aa9.67□□□□□ -0.86
CTTN-201ENST00000301843 RPL35AP18077 110 aaKnown RBP9.67□□□□□ -0.86
CTTN-201ENST00000301843 GAGE6Q13070 117 aa9.67□□□□□ -0.86
CTTN-201ENST00000301843 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
CTTN-201ENST00000301843 FAM218AQ96MZ4 157 aa9.66□□□□□ -0.86
CTTN-201ENST00000301843 PEMTQ9UBM1 199 aa9.66□□□□□ -0.86
CTTN-201ENST00000301843 GAGE7O76087 117 aa9.66□□□□□ -0.86
CTTN-201ENST00000301843 GAGE12FP0CL80 117 aa9.66□□□□□ -0.86
CTTN-201ENST00000301843 GAGE12GP0CL81 117 aa9.66□□□□□ -0.86
CTTN-201ENST00000301843 GAGE12IP0CL82 117 aa9.66□□□□□ -0.86
CTTN-201ENST00000301843 YAE1D1Q9NRH1 226 aa9.66□□□□□ -0.86
CTTN-201ENST00000301843 BBC3Q96PG8 261 aaPredicted RBP9.65□□□□□ -0.86
CTTN-201ENST00000301843 UBR5O95071 2799 aaPredicted RBP9.65□□□□□ -0.86
CTTN-201ENST00000301843 A8MTW9 85 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms