RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TP73-AS1Q9UF72 201 aa11.01□□□□□ -0.65
HERPUD1-201ENST00000300302 CSDC2Q9Y534 153 aaKnown RBP11.01□□□□□ -0.65
HERPUD1-201ENST00000300302 TRBV6-8A0A0A6YYG3 113 aa11□□□□□ -0.65
HERPUD1-201ENST00000300302 FGF6P10767 208 aa11□□□□□ -0.65
HERPUD1-201ENST00000300302 SPATA25Q9BR10 227 aa11□□□□□ -0.65
HERPUD1-201ENST00000300302 HTN3P15516 51 aa11□□□□□ -0.65
HERPUD1-201ENST00000300302 NMUP48645 174 aa11□□□□□ -0.65
HERPUD1-201ENST00000300302 TCTAP57738 103 aa11□□□□□ -0.65
HERPUD1-201ENST00000300302 C12orf74Q32Q52 190 aa11□□□□□ -0.65
HERPUD1-201ENST00000300302 VSIG2Q96IQ7 327 aa11□□□□□ -0.65
HERPUD1-201ENST00000300302 MRPS16Q9Y3D3 137 aaKnown RBP11□□□□□ -0.65
HERPUD1-201ENST00000300302 TRAV26-1A0A087WT03 109 aa10.99□□□□□ -0.65
HERPUD1-201ENST00000300302 A0A0J9YY99 117 aa10.99□□□□□ -0.65
HERPUD1-201ENST00000300302 AMMECR1LQ6DCA0 310 aa10.99□□□□□ -0.65
HERPUD1-201ENST00000300302 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
HERPUD1-201ENST00000300302 C11orf86A6NJI1 115 aa10.98□□□□□ -0.65
HERPUD1-201ENST00000300302 Q6ZUT4 128 aa10.98□□□□□ -0.65
HERPUD1-201ENST00000300302 NFE4Q86UQ8 179 aa10.98□□□□□ -0.65
HERPUD1-201ENST00000300302 TMEM101Q96IK0 257 aa10.98□□□□□ -0.65
HERPUD1-201ENST00000300302 OR5A1Q8NGJ0 315 aa10.98□□□□□ -0.65
HERPUD1-201ENST00000300302 CHAC1Q9BUX1 264 aa10.98□□□□□ -0.65
HERPUD1-201ENST00000300302 A0A0J9YWU9 116 aa10.97□□□□□ -0.65
HERPUD1-201ENST00000300302 ZNF25P17030 456 aaPredicted RBP10.97□□□□□ -0.65
HERPUD1-201ENST00000300302 HERVK_113P61574 105 aa10.97□□□□□ -0.65
HERPUD1-201ENST00000300302 SH2D6Q7Z4S9 175 aa10.97□□□□□ -0.65
HERPUD1-201ENST00000300302 TM2D3Q9BRN9 247 aa10.97□□□□□ -0.65
HERPUD1-201ENST00000300302 MRPL23Q16540 153 aaKnown RBP10.96□□□□□ -0.65
HERPUD1-201ENST00000300302 RNASE13Q5GAN3 156 aaKnown RBP10.96□□□□□ -0.65
HERPUD1-201ENST00000300302 TMEM170BQ5T4T1 132 aa10.96□□□□□ -0.65
HERPUD1-201ENST00000300302 BOD1L2Q8IYS8 172 aa10.96□□□□□ -0.65
HERPUD1-201ENST00000300302 CHCHD5Q9BSY4 110 aa10.96□□□□□ -0.65
HERPUD1-201ENST00000300302 NOTCH1P46531 2555 aa10.96□□□□□ -0.66
HERPUD1-201ENST00000300302 IGKV2D-26A0A0A0MRZ7 120 aa10.95□□□□□ -0.66
HERPUD1-201ENST00000300302 DLEU1O43261 78 aa10.95□□□□□ -0.66
HERPUD1-201ENST00000300302 MRAPQ8TCY5 172 aa10.95□□□□□ -0.66
HERPUD1-201ENST00000300302 A0A0J9YXV3 536 aa10.95□□□□□ -0.66
HERPUD1-201ENST00000300302 ICOSQ9Y6W8 199 aa10.95□□□□□ -0.66
HERPUD1-201ENST00000300302 A0A096LPF7 62 aa10.94□□□□□ -0.66
HERPUD1-201ENST00000300302 E9PLD3 99 aa10.94□□□□□ -0.66
HERPUD1-201ENST00000300302 PCP2Q8IVA1 136 aa10.94□□□□□ -0.66
HERPUD1-201ENST00000300302 CDC42SE2Q9NRR3 84 aa10.94□□□□□ -0.66
HERPUD1-201ENST00000300302 TINCRA0A1B0GVN0 87 aa10.93□□□□□ -0.66
HERPUD1-201ENST00000300302 GAGE6Q13070 117 aa10.93□□□□□ -0.66
HERPUD1-201ENST00000300302 C11orf45Q8TAV5 145 aa10.93□□□□□ -0.66
HERPUD1-201ENST00000300302 UBE2D1P51668 147 aa10.93□□□□□ -0.66
HERPUD1-201ENST00000300302 Q6ZTC4 211 aa10.93□□□□□ -0.66
HERPUD1-201ENST00000300302 NBEAL1Q6ZS30 2694 aa10.93□□□□□ -0.66
HERPUD1-201ENST00000300302 TRAV8-6A0A0B4J262 113 aa10.92□□□□□ -0.66
HERPUD1-201ENST00000300302 A0A1B0GV90 55 aa10.92□□□□□ -0.66
HERPUD1-201ENST00000300302 H3BNG1 76 aa10.92□□□□□ -0.66
HERPUD1-201ENST00000300302 SIVA1O15304 175 aa10.92□□□□□ -0.66
HERPUD1-201ENST00000300302 C2orf91Q6ZV80 131 aa10.92□□□□□ -0.66
HERPUD1-201ENST00000300302 ZNF22P17026 224 aaPredicted RBP10.91□□□□□ -0.66
HERPUD1-201ENST00000300302 SEC11AP67812 179 aa10.91□□□□□ -0.66
HERPUD1-201ENST00000300302 BATFQ16520 125 aa10.91□□□□□ -0.66
HERPUD1-201ENST00000300302 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
HERPUD1-201ENST00000300302 MGAM2Q2M2H8 2515 aa10.9□□□□□ -0.66
HERPUD1-201ENST00000300302 TMEM223A0PJW6 202 aa10.89□□□□□ -0.67
HERPUD1-201ENST00000300302 TMEM262E9PQX1 116 aa10.89□□□□□ -0.67
HERPUD1-201ENST00000300302 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
HERPUD1-201ENST00000300302 TIRAPP58753 221 aa10.89□□□□□ -0.67
HERPUD1-201ENST00000300302 NANOS2P60321 138 aaKnown RBP10.89□□□□□ -0.67
HERPUD1-201ENST00000300302 A0A1B0GUV1 79 aa10.89□□□□□ -0.67
HERPUD1-201ENST00000300302 HERVK_113P63121 156 aa10.89□□□□□ -0.67
HERPUD1-201ENST00000300302 FAM19A3Q7Z5A8 133 aa10.89□□□□□ -0.67
HERPUD1-201ENST00000300302 TTTY13Q9BZ97 58 aa10.89□□□□□ -0.67
HERPUD1-201ENST00000300302 TRAV13-1A0A0B4J241 112 aa10.88□□□□□ -0.67
HERPUD1-201ENST00000300302 LINC00469Q8N7U9 141 aa10.88□□□□□ -0.67
HERPUD1-201ENST00000300302 DEFB131BA0A096LNP1 70 aa10.87□□□□□ -0.67
HERPUD1-201ENST00000300302 MYMXA0A1B0GTQ4 84 aa10.87□□□□□ -0.67
HERPUD1-201ENST00000300302 H3BRM9 83 aa10.87□□□□□ -0.67
HERPUD1-201ENST00000300302 IGLV4-60A0A075B6I1 120 aa10.87□□□□□ -0.67
HERPUD1-201ENST00000300302 MPV17L2Q567V2 206 aa10.87□□□□□ -0.67
HERPUD1-201ENST00000300302 COL5A1-AS1Q5SY13 56 aa10.87□□□□□ -0.67
HERPUD1-201ENST00000300302 LINC00242Q5T6M2 205 aa10.87□□□□□ -0.67
HERPUD1-201ENST00000300302 LELP1Q5T871 98 aa10.87□□□□□ -0.67
HERPUD1-201ENST00000300302 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
HERPUD1-201ENST00000300302 HIGD1BQ9P298 99 aa10.87□□□□□ -0.67
HERPUD1-201ENST00000300302 IGLV5-45A0A087WSX0 123 aa10.86□□□□□ -0.67
HERPUD1-201ENST00000300302 LEPROTO15243 131 aa10.86□□□□□ -0.67
HERPUD1-201ENST00000300302 J3QQQ9 107 aa10.85□□□□□ -0.67
HERPUD1-201ENST00000300302 LGALS3P17931 250 aaKnown RBP10.85□□□□□ -0.67
HERPUD1-201ENST00000300302 RBX1P62877 108 aa10.85□□□□□ -0.67
HERPUD1-201ENST00000300302 PLEKHB2Q96CS7 222 aa10.85□□□□□ -0.67
HERPUD1-201ENST00000300302 ZNF815PA8K554 130 aa10.85□□□□□ -0.67
HERPUD1-201ENST00000300302 CDKN2A-AS1Q9UH64 79 aa10.85□□□□□ -0.67
HERPUD1-201ENST00000300302 BVES-AS1Q5T3Y7 98 aa10.84□□□□□ -0.67
HERPUD1-201ENST00000300302 TRAV10A0A0B4J240 114 aa10.83□□□□□ -0.68
HERPUD1-201ENST00000300302 IGHV1-58A0A0C4DH39 117 aa10.83□□□□□ -0.68
HERPUD1-201ENST00000300302 LYPD5Q6UWN5 251 aa10.83□□□□□ -0.68
HERPUD1-201ENST00000300302 B9D2Q9BPU9 175 aa10.83□□□□□ -0.68
HERPUD1-201ENST00000300302 TENM3Q9P273 2699 aa10.83□□□□□ -0.68
HERPUD1-201ENST00000300302 IGHV3-64A0A075B6Q5 118 aa10.83□□□□□ -0.68
HERPUD1-201ENST00000300302 COX6A2Q02221 97 aa10.83□□□□□ -0.68
HERPUD1-201ENST00000300302 IGKV3OR2-268A0A0C4DH90 116 aa10.82□□□□□ -0.68
HERPUD1-201ENST00000300302 IGHV3-30-3P0DP02 117 aa10.82□□□□□ -0.68
HERPUD1-201ENST00000300302 HSD52Q0P140 79 aa10.82□□□□□ -0.68
HERPUD1-201ENST00000300302 HUWE1Q7Z6Z7 4374 aaKnown RBP10.81□□□□□ -0.68
HERPUD1-201ENST00000300302 SPINK8P0C7L1 97 aa10.81□□□□□ -0.68
HERPUD1-201ENST00000300302 TSPEAR-AS2P59090 65 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms