RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 C22orf24Q9Y442 160 aa9.42□□□□□ -0.9
TVP23A-201ENST00000299866 ABCA2Q9BZC7 2435 aa9.42□□□□□ -0.9
TVP23A-201ENST00000299866 SPG11Q96JI7 2443 aa9.42□□□□□ -0.9
TVP23A-201ENST00000299866 A6NDX4 124 aa9.42□□□□□ -0.9
TVP23A-201ENST00000299866 TRACP01848 142 aa9.42□□□□□ -0.9
TVP23A-201ENST00000299866 BEAN1Q3B7T3 259 aa9.42□□□□□ -0.9
TVP23A-201ENST00000299866 IGHV3OR16-12A0A075B7B8 117 aa9.41□□□□□ -0.9
TVP23A-201ENST00000299866 IGKV3D-7A0A0C4DH55 119 aa9.41□□□□□ -0.9
TVP23A-201ENST00000299866 J3KT08 172 aa9.41□□□□□ -0.9
TVP23A-201ENST00000299866 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
TVP23A-201ENST00000299866 LINC00242Q5T6M2 205 aa9.4□□□□□ -0.9
TVP23A-201ENST00000299866 ATP5G1P05496 136 aa9.4□□□□□ -0.9
TVP23A-201ENST00000299866 INAFM2P0DMQ5 153 aa9.4□□□□□ -0.9
TVP23A-201ENST00000299866 CYSTM1Q9H1C7 97 aa9.4□□□□□ -0.9
TVP23A-201ENST00000299866 K7ENP7 123 aa9.4□□□□□ -0.91
TVP23A-201ENST00000299866 MALP21145 153 aa9.4□□□□□ -0.91
TVP23A-201ENST00000299866 CXCL5P42830 114 aa9.4□□□□□ -0.91
TVP23A-201ENST00000299866 C2orf48Q96LS8 159 aa9.4□□□□□ -0.91
TVP23A-201ENST00000299866 NOTCH3Q9UM47 2321 aa9.4□□□□□ -0.91
TVP23A-201ENST00000299866 DEFB131AP59861 70 aa9.39□□□□□ -0.91
TVP23A-201ENST00000299866 C14orf132Q9NPU4 83 aa9.39□□□□□ -0.91
TVP23A-201ENST00000299866 IGLV5-45A0A087WSX0 123 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 DNAL4O96015 105 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 PIMREGQ9BSJ6 248 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 IGF2RP11717 2491 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 IGHV4-61A0A0C4DH41 118 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 A0A1B0GX51 115 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 SMIM9A6NGZ8 99 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 SMIM1B2RUZ4 78 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 C9orf129Q5T035 196 aaKnown RBP9.38□□□□□ -0.91
TVP23A-201ENST00000299866 LRRC75A-AS1Q8N1F1 130 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 COPS9Q8WXC6 57 aa9.38□□□□□ -0.91
TVP23A-201ENST00000299866 HIVEP3Q5T1R4 2406 aa9.37□□□□□ -0.91
TVP23A-201ENST00000299866 ATOX1O00244 68 aa9.37□□□□□ -0.91
TVP23A-201ENST00000299866 A0A087WVE0 104 aa9.37□□□□□ -0.91
TVP23A-201ENST00000299866 CFHR3Q02985 330 aa9.37□□□□□ -0.91
TVP23A-201ENST00000299866 C5orf47Q569G3 176 aa9.37□□□□□ -0.91
TVP23A-201ENST00000299866 ZNF415Q09FC8 603 aa9.37□□□□□ -0.91
TVP23A-201ENST00000299866 CRYGAP11844 174 aa9.36□□□□□ -0.91
TVP23A-201ENST00000299866 HIST2H2BCQ6DN03 193 aa9.36□□□□□ -0.91
TVP23A-201ENST00000299866 HIST2H2BDQ6DRA6 164 aa9.36□□□□□ -0.91
TVP23A-201ENST00000299866 KIR2DL5BQ8NHK3 375 aa9.36□□□□□ -0.91
TVP23A-201ENST00000299866 PSMB8P28062 276 aa9.36□□□□□ -0.91
TVP23A-201ENST00000299866 IGHV3-53P01767 116 aa9.35□□□□□ -0.91
TVP23A-201ENST00000299866 CRPP02741 224 aa9.35□□□□□ -0.91
TVP23A-201ENST00000299866 FAM222AQ5U5X8 452 aa9.35□□□□□ -0.91
TVP23A-201ENST00000299866 A0A087WYN8 130 aa9.35□□□□□ -0.91
TVP23A-201ENST00000299866 RBMY1BA6NDE4 496 aaKnown RBP9.35□□□□□ -0.91
TVP23A-201ENST00000299866 RBMY1EA6NEQ0 496 aaKnown RBP9.35□□□□□ -0.91
TVP23A-201ENST00000299866 RBMY1DP0C7P1 496 aaKnown RBP9.35□□□□□ -0.91
TVP23A-201ENST00000299866 VPS13CQ709C8 3753 aa9.34□□□□□ -0.91
TVP23A-201ENST00000299866 RPL18AQ02543 176 aaKnown RBP9.34□□□□□ -0.91
TVP23A-201ENST00000299866 TOMM7Q9P0U1 55 aa9.34□□□□□ -0.91
TVP23A-201ENST00000299866 LINC00337Q8N6G1 96 aa9.34□□□□□ -0.91
TVP23A-201ENST00000299866 CRYBG3Q68DQ2 2970 aa9.34□□□□□ -0.91
TVP23A-201ENST00000299866 LINC00846Q9NV44 126 aa9.33□□□□□ -0.92
TVP23A-201ENST00000299866 MIR7-3HGQ8N6C7 128 aa9.33□□□□□ -0.92
TVP23A-201ENST00000299866 HIST1H4AP62805 103 aaKnown RBP9.33□□□□□ -0.92
TVP23A-201ENST00000299866 TRAV13-2A0A0B4J235 113 aa9.32□□□□□ -0.92
TVP23A-201ENST00000299866 IGKV3OR2-268A0A0C4DH90 116 aa9.32□□□□□ -0.92
TVP23A-201ENST00000299866 IGHV4-59P01825 116 aa9.32□□□□□ -0.92
TVP23A-201ENST00000299866 DSCR8Q96T75 97 aa9.32□□□□□ -0.92
TVP23A-201ENST00000299866 RPL28P46779 137 aaKnown RBP9.32□□□□□ -0.92
TVP23A-201ENST00000299866 OR13C6PQ8NH95 151 aa9.32□□□□□ -0.92
TVP23A-201ENST00000299866 SND1-IT1Q9HBX3 110 aa9.32□□□□□ -0.92
TVP23A-201ENST00000299866 NCR3O14931 201 aa9.31□□□□□ -0.92
TVP23A-201ENST00000299866 SLPIP03973 132 aa9.31□□□□□ -0.92
TVP23A-201ENST00000299866 SMIM11BQ8TCY0 68 aa9.31□□□□□ -0.92
TVP23A-201ENST00000299866 Q96MF0 132 aa9.31□□□□□ -0.92
TVP23A-201ENST00000299866 AVPP01185 164 aa9.31□□□□□ -0.92
TVP23A-201ENST00000299866 LINC00158P58513 81 aa9.31□□□□□ -0.92
TVP23A-201ENST00000299866 DEFB136Q30KP8 78 aa9.3□□□□□ -0.92
TVP23A-201ENST00000299866 PRORYQ9H606 182 aa9.3□□□□□ -0.92
TVP23A-201ENST00000299866 LECT2O14960 151 aa9.3□□□□□ -0.92
TVP23A-201ENST00000299866 IGKV2-28A0A075B6P5 120 aa9.3□□□□□ -0.92
TVP23A-201ENST00000299866 F5H768 121 aa9.3□□□□□ -0.92
TVP23A-201ENST00000299866 IGKV2D-28P01615 120 aa9.3□□□□□ -0.92
TVP23A-201ENST00000299866 SERP2Q8N6R1 65 aa9.29□□□□□ -0.92
TVP23A-201ENST00000299866 C11orf72Q8NBR9 251 aa9.29□□□□□ -0.92
TVP23A-201ENST00000299866 MUC6Q6W4X9 2439 aa9.29□□□□□ -0.92
TVP23A-201ENST00000299866 DPH3Q96FX2 82 aa9.29□□□□□ -0.92
TVP23A-201ENST00000299866 TRGV1A0A0A0MS02 117 aa9.29□□□□□ -0.92
TVP23A-201ENST00000299866 C19orf84I3L1E1 186 aa9.29□□□□□ -0.92
TVP23A-201ENST00000299866 SLURP1P55000 103 aa9.29□□□□□ -0.92
TVP23A-201ENST00000299866 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
TVP23A-201ENST00000299866 RNF152Q8N8N0 203 aa9.29□□□□□ -0.92
TVP23A-201ENST00000299866 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
TVP23A-201ENST00000299866 RPS28P62857 69 aaKnown RBP9.28□□□□□ -0.92
TVP23A-201ENST00000299866 LINC01561Q8N1V8 128 aa9.28□□□□□ -0.92
TVP23A-201ENST00000299866 XCL2Q9UBD3 114 aa9.28□□□□□ -0.92
TVP23A-201ENST00000299866 TMEM89A2RUT3 159 aa9.27□□□□□ -0.92
TVP23A-201ENST00000299866 Q6JHZ5 121 aa9.27□□□□□ -0.92
TVP23A-201ENST00000299866 UBE2E2Q96LR5 201 aa9.27□□□□□ -0.92
TVP23A-201ENST00000299866 CDC42SE2Q9NRR3 84 aa9.27□□□□□ -0.92
TVP23A-201ENST00000299866 RPL36AP83881 106 aaKnown RBP9.27□□□□□ -0.93
TVP23A-201ENST00000299866 RPL36ALQ969Q0 106 aaKnown RBP9.27□□□□□ -0.93
TVP23A-201ENST00000299866 PF4P02776 101 aa9.27□□□□□ -0.93
TVP23A-201ENST00000299866 PFN2P35080 140 aa9.27□□□□□ -0.93
TVP23A-201ENST00000299866 DEFB112Q30KQ8 113 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms