RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 CEMP1Q6PRD7 247 aaPredicted RBP7.19□□□□□ -1.26
TNFRSF11B-201ENST00000297350 EPG5Q9HCE0 2579 aa7.19□□□□□ -1.26
TNFRSF11B-201ENST00000297350 FAM208BQ5VWN6 2430 aa7.19□□□□□ -1.26
TNFRSF11B-201ENST00000297350 TRAV8-3A0A0A6YYJ7 113 aa7.19□□□□□ -1.26
TNFRSF11B-201ENST00000297350 VPS13CQ709C8 3753 aa7.18□□□□□ -1.26
TNFRSF11B-201ENST00000297350 NAV2Q8IVL1 2488 aa7.18□□□□□ -1.26
TNFRSF11B-201ENST00000297350 SLC25A20O43772 301 aa7.18□□□□□ -1.26
TNFRSF11B-201ENST00000297350 SPINK8P0C7L1 97 aa7.18□□□□□ -1.26
TNFRSF11B-201ENST00000297350 CELSR2Q9HCU4 2923 aa7.18□□□□□ -1.26
TNFRSF11B-201ENST00000297350 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
TNFRSF11B-201ENST00000297350 MTURNQ8N3F0 131 aa7.18□□□□□ -1.26
TNFRSF11B-201ENST00000297350 CDKN2A-AS1Q9UH64 79 aa7.18□□□□□ -1.26
TNFRSF11B-201ENST00000297350 LRRK2Q5S007 2527 aa7.18□□□□□ -1.26
TNFRSF11B-201ENST00000297350 SORL1Q92673 2214 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 NDUFA7O95182 113 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 PRSS2P07478 247 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 HERV-K104P63124 156 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 TMEM101Q96IK0 257 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 OVOL2Q9BRP0 275 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 ZFHX3Q15911 3703 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 IGHV3OR16-12A0A075B7B8 117 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 TRAV26-1A0A087WT03 109 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 IGHV3-38A0A0C4DH36 116 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 TRBV6-4A0A1B0GX49 114 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 IGLV1-51P01701 117 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 PRM2P04554 102 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 LINC01620Q4KN68 170 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 SFTA2Q6UW10 78 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 Q9UF83 564 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 ICOSQ9Y6W8 199 aa7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 UTP20O75691 2785 aaKnown RBP7.17□□□□□ -1.26
TNFRSF11B-201ENST00000297350 RNASE13Q5GAN3 156 aaKnown RBP7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 LINC00242Q5T6M2 205 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 ANKRD29Q8N6D5 301 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 CITED2Q99967 270 aaPredicted RBP7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 ESM1Q9NQ30 184 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 PTPN13Q12923 2485 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 TRBV10-2A0A0K0K1G8 114 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 C9JAW5 83 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 H3BT86 120 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 RPL13AP40429 203 aaKnown RBP7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 INSL3P51460 131 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 ADAMTSL4-AS1Q5T5F5 129 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 Q6ZTI0 123 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 LINC01006Q8NI28 216 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 TMEM243Q9BU79 118 aa7.16□□□□□ -1.26
TNFRSF11B-201ENST00000297350 A0A1W2PRX2 142 aa7.15□□□□□ -1.26
TNFRSF11B-201ENST00000297350 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.26
TNFRSF11B-201ENST00000297350 CDC42SE2Q9NRR3 84 aa7.15□□□□□ -1.26
TNFRSF11B-201ENST00000297350 UBE2L6O14933 153 aa7.15□□□□□ -1.27
TNFRSF11B-201ENST00000297350 TRIAP1O43715 76 aa7.15□□□□□ -1.27
TNFRSF11B-201ENST00000297350 CARD19Q96LW7 228 aa7.15□□□□□ -1.27
TNFRSF11B-201ENST00000297350 CRYBG3Q68DQ2 2970 aa7.14□□□□□ -1.27
TNFRSF11B-201ENST00000297350 SMIM1B2RUZ4 78 aa7.14□□□□□ -1.27
TNFRSF11B-201ENST00000297350 CDIP1Q9H305 208 aa7.14□□□□□ -1.27
TNFRSF11B-201ENST00000297350 H7C2G1 150 aa7.13□□□□□ -1.27
TNFRSF11B-201ENST00000297350 GIG44P09565 113 aaPredicted RBP7.13□□□□□ -1.27
TNFRSF11B-201ENST00000297350 NTM-AS1Q6ZSK4 140 aa7.13□□□□□ -1.27
TNFRSF11B-201ENST00000297350 NOP10Q9NPE3 64 aaKnown RBP7.13□□□□□ -1.27
TNFRSF11B-201ENST00000297350 MXRA5Q9NR99 2828 aa7.13□□□□□ -1.27
TNFRSF11B-201ENST00000297350 TRGV2A0A075B6R0 118 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 PLAC8L1A1L4L8 177 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 HILS1P60008 231 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 LINC00308Q8TCZ7 52 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 ZNF625Q96I27 306 aaPredicted RBP7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 Q9H8V8 135 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 C19orf73Q9NVV2 129 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 CSMD2Q7Z408 3487 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 POLQO75417 2590 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 F5H768 121 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 LST1O00453 97 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 CSNK1G2-AS1Q8NCQ2 148 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 APCP25054 2843 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 ZANQ9Y493 2812 aa7.12□□□□□ -1.27
TNFRSF11B-201ENST00000297350 GAGE12JA6NER3 117 aa7.11□□□□□ -1.27
TNFRSF11B-201ENST00000297350 LINC00694P0DN24 101 aa7.11□□□□□ -1.27
TNFRSF11B-201ENST00000297350 COX6A2Q02221 97 aa7.11□□□□□ -1.27
TNFRSF11B-201ENST00000297350 GAGE4Q13068 117 aa7.11□□□□□ -1.27
TNFRSF11B-201ENST00000297350 GAGE5Q13069 117 aa7.11□□□□□ -1.27
TNFRSF11B-201ENST00000297350 MYO9AB2RTY4 2548 aa7.11□□□□□ -1.27
TNFRSF11B-201ENST00000297350 PF4P02776 101 aa7.11□□□□□ -1.27
TNFRSF11B-201ENST00000297350 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.11□□□□□ -1.27
TNFRSF11B-201ENST00000297350 TENM4Q6N022 2769 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 FAM222AQ5U5X8 452 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 PRIMA1Q86XR5 153 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 C11orf44Q8N8P7 122 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 TRAV13-1A0A0B4J241 112 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 TRGV4A0A0C4DH28 118 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 A8MZ25 164 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 KIR2DL5BQ8NHK3 375 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 UBE2WQ96B02 151 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 CITED1Q99966 193 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 PDZD2O15018 2839 aa7.1□□□□□ -1.27
TNFRSF11B-201ENST00000297350 CKS1BP61024 79 aa7.09□□□□□ -1.27
TNFRSF11B-201ENST00000297350 C2orf82Q6UX34 121 aa7.09□□□□□ -1.27
TNFRSF11B-201ENST00000297350 TEX15Q9BXT5 2789 aa7.09□□□□□ -1.27
TNFRSF11B-201ENST00000297350 MAP1AP78559 2803 aaPredicted RBP7.09□□□□□ -1.27
TNFRSF11B-201ENST00000297350 FAM240AA0A1B0GVK7 77 aa7.09□□□□□ -1.27
TNFRSF11B-201ENST00000297350 SMIM9A6NGZ8 99 aa7.09□□□□□ -1.27
TNFRSF11B-201ENST00000297350 GAGE7O76087 117 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms