RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 IGF2-ASQ6U949 168 aa12.05□□□□□ -0.48
SSRP1-202ENST00000293880 LOC100131303A0A0U1RQF7 123 aa12.04□□□□□ -0.48
SSRP1-202ENST00000293880 RPL37AP8A6NKH3 93 aa12.04□□□□□ -0.48
SSRP1-202ENST00000293880 BRWD1-AS2P59051 145 aa12.04□□□□□ -0.48
SSRP1-202ENST00000293880 C9orf85Q96MD7 179 aa12.04□□□□□ -0.48
SSRP1-202ENST00000293880 RNF185Q96GF1 192 aa12.04□□□□□ -0.48
SSRP1-202ENST00000293880 ZNF295-AS1Q8N0V1 137 aa12.03□□□□□ -0.48
SSRP1-202ENST00000293880 MBD6Q96DN6 1003 aa12.03□□□□□ -0.48
SSRP1-202ENST00000293880 C19orf84I3L1E1 186 aa12.03□□□□□ -0.48
SSRP1-202ENST00000293880 Q8N9L7 120 aa12.03□□□□□ -0.48
SSRP1-202ENST00000293880 EBI3Q14213 229 aa12.02□□□□□ -0.48
SSRP1-202ENST00000293880 ATP5EP56381 51 aaPredicted RBP12.02□□□□□ -0.48
SSRP1-202ENST00000293880 M0R2N4 97 aa12.02□□□□□ -0.49
SSRP1-202ENST00000293880 SMIM26A0A096LP01 95 aa12.01□□□□□ -0.49
SSRP1-202ENST00000293880 Q8N976 141 aa12.01□□□□□ -0.49
SSRP1-202ENST00000293880 BEAN1Q3B7T3 259 aa12.01□□□□□ -0.49
SSRP1-202ENST00000293880 NUP210LQ5VU65 1888 aa12.01□□□□□ -0.49
SSRP1-202ENST00000293880 A0A087WVE0 104 aa12.01□□□□□ -0.49
SSRP1-202ENST00000293880 C6orf99Q4VX62 202 aa12.01□□□□□ -0.49
SSRP1-202ENST00000293880 NOTCH2Q04721 2471 aa12.01□□□□□ -0.49
SSRP1-202ENST00000293880 OTOGLQ3ZCN5 2332 aa12.01□□□□□ -0.49
SSRP1-202ENST00000293880 IGLV2-18A0A075B6J9 118 aa12.01□□□□□ -0.49
SSRP1-202ENST00000293880 ATP5EP2Q5VTU8 51 aa12.01□□□□□ -0.49
SSRP1-202ENST00000293880 NDUFC1O43677 76 aa12□□□□□ -0.49
SSRP1-202ENST00000293880 PLA2G2AP14555 144 aa12□□□□□ -0.49
SSRP1-202ENST00000293880 TRBV6-5A0A0K0K1A5 114 aa12□□□□□ -0.49
SSRP1-202ENST00000293880 IGLV9-49A0A0B4J1Y8 123 aa12□□□□□ -0.49
SSRP1-202ENST00000293880 MIFP14174 115 aa12□□□□□ -0.49
SSRP1-202ENST00000293880 ODF3BA8MYP8 253 aa11.99□□□□□ -0.49
SSRP1-202ENST00000293880 DEFB131BA0A096LNP1 70 aa11.99□□□□□ -0.49
SSRP1-202ENST00000293880 C18orf65Q6ZTR6 163 aa11.99□□□□□ -0.49
SSRP1-202ENST00000293880 CUL9Q8IWT3 2517 aa11.99□□□□□ -0.49
SSRP1-202ENST00000293880 C2orf16Q68DN1 1984 aa11.99□□□□□ -0.49
SSRP1-202ENST00000293880 P0C879 139 aa11.98□□□□□ -0.49
SSRP1-202ENST00000293880 SERTAD4-AS1Q5TG53 156 aa11.98□□□□□ -0.49
SSRP1-202ENST00000293880 BBC3Q96PG8 261 aaPredicted RBP11.98□□□□□ -0.49
SSRP1-202ENST00000293880 WFDC10AQ9H1F0 79 aa11.98□□□□□ -0.49
SSRP1-202ENST00000293880 M0QY20 66 aa11.98□□□□□ -0.49
SSRP1-202ENST00000293880 RETNLBQ9BQ08 111 aa11.98□□□□□ -0.49
SSRP1-202ENST00000293880 GAS8-AS1O95177 125 aa11.97□□□□□ -0.49
SSRP1-202ENST00000293880 Q6ZS46 218 aa11.97□□□□□ -0.49
SSRP1-202ENST00000293880 PRO3102Q9H379 93 aa11.97□□□□□ -0.49
SSRP1-202ENST00000293880 PRORYQ9H606 182 aa11.97□□□□□ -0.49
SSRP1-202ENST00000293880 TRBV30A0A0K0K1B3 111 aa11.96□□□□□ -0.49
SSRP1-202ENST00000293880 TRBV6-8A0A0A6YYG3 113 aa11.96□□□□□ -0.49
SSRP1-202ENST00000293880 DEFB114Q30KQ6 69 aa11.96□□□□□ -0.5
SSRP1-202ENST00000293880 SMIM11BQ8TCY0 68 aa11.95□□□□□ -0.5
SSRP1-202ENST00000293880 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
SSRP1-202ENST00000293880 U3KQK5 164 aa11.95□□□□□ -0.5
SSRP1-202ENST00000293880 PRR9Q5T870 116 aa11.95□□□□□ -0.5
SSRP1-202ENST00000293880 Q8NA96 180 aa11.95□□□□□ -0.5
SSRP1-202ENST00000293880 TMEM89A2RUT3 159 aa11.95□□□□□ -0.5
SSRP1-202ENST00000293880 C2orf91Q6ZV80 131 aa11.94□□□□□ -0.5
SSRP1-202ENST00000293880 H7C423 109 aa11.94□□□□□ -0.5
SSRP1-202ENST00000293880 TSHBP01222 138 aa11.94□□□□□ -0.5
SSRP1-202ENST00000293880 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.94□□□□□ -0.5
SSRP1-202ENST00000293880 INAFM1C9JVW0 142 aa11.94□□□□□ -0.5
SSRP1-202ENST00000293880 Q6YL49 198 aa11.93□□□□□ -0.5
SSRP1-202ENST00000293880 DAZAP2Q15038 168 aaPredicted RBP11.93□□□□□ -0.5
SSRP1-202ENST00000293880 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
SSRP1-202ENST00000293880 C14orf177Q52M58 125 aa11.93□□□□□ -0.5
SSRP1-202ENST00000293880 Q6ZQY7 126 aa11.93□□□□□ -0.5
SSRP1-202ENST00000293880 IBA57-AS1B1ANH7 110 aa11.93□□□□□ -0.5
SSRP1-202ENST00000293880 TMEM131Q92545 1883 aa11.92□□□□□ -0.5
SSRP1-202ENST00000293880 SPRY4Q9C004 299 aa11.92□□□□□ -0.5
SSRP1-202ENST00000293880 X6R8D5 127 aa11.92□□□□□ -0.5
SSRP1-202ENST00000293880 CRIP3Q6Q6R5 217 aa11.92□□□□□ -0.5
SSRP1-202ENST00000293880 K7EQG2 157 aa11.92□□□□□ -0.5
SSRP1-202ENST00000293880 LYRM9A8MSI8 78 aa11.91□□□□□ -0.5
SSRP1-202ENST00000293880 EIF4EBP1Q13541 118 aaPredicted RBP11.91□□□□□ -0.5
SSRP1-202ENST00000293880 Q6ZSV7 163 aa11.91□□□□□ -0.5
SSRP1-202ENST00000293880 IGLV2-11P01706 119 aa11.9□□□□□ -0.5
SSRP1-202ENST00000293880 YPEL4Q96NS1 127 aa11.9□□□□□ -0.5
SSRP1-202ENST00000293880 SPINK1P00995 79 aa11.9□□□□□ -0.5
SSRP1-202ENST00000293880 LY6LH3BQJ8 138 aa11.9□□□□□ -0.5
SSRP1-202ENST00000293880 HILS1P60008 231 aa11.9□□□□□ -0.5
SSRP1-202ENST00000293880 PCOTHQ58A44 107 aa11.9□□□□□ -0.5
SSRP1-202ENST00000293880 ODF3Q96PU9 254 aa11.9□□□□□ -0.5
SSRP1-202ENST00000293880 EDN2P20800 178 aa11.89□□□□□ -0.51
SSRP1-202ENST00000293880 LINC00208Q96KT6 92 aa11.89□□□□□ -0.51
SSRP1-202ENST00000293880 LMO4P61968 165 aa11.89□□□□□ -0.51
SSRP1-202ENST00000293880 NRACQ8N912 160 aa11.89□□□□□ -0.51
SSRP1-202ENST00000293880 IMUPQ9GZP8 106 aa11.89□□□□□ -0.51
SSRP1-202ENST00000293880 UBE2D1P51668 147 aa11.89□□□□□ -0.51
SSRP1-202ENST00000293880 UBE2D4Q9Y2X8 147 aa11.89□□□□□ -0.51
SSRP1-202ENST00000293880 TNFRSF13BO14836 293 aaPredicted RBP11.88□□□□□ -0.51
SSRP1-202ENST00000293880 ZNF843Q8N446 348 aa11.88□□□□□ -0.51
SSRP1-202ENST00000293880 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
SSRP1-202ENST00000293880 SYCNQ0VAF6 134 aa11.87□□□□□ -0.51
SSRP1-202ENST00000293880 C11orf21Q9P2W6 132 aa11.87□□□□□ -0.51
SSRP1-202ENST00000293880 TRBV7-6A0A0J9YX20 115 aa11.87□□□□□ -0.51
SSRP1-202ENST00000293880 SHANK1Q9Y566 2161 aa11.87□□□□□ -0.51
SSRP1-202ENST00000293880 CRIP2P52943 208 aaPredicted RBP11.86□□□□□ -0.51
SSRP1-202ENST00000293880 CRYGAP11844 174 aa11.86□□□□□ -0.51
SSRP1-202ENST00000293880 MED13Q9UHV7 2174 aa11.86□□□□□ -0.51
SSRP1-202ENST00000293880 ACACBO00763 2458 aa11.86□□□□□ -0.51
SSRP1-202ENST00000293880 RNASE3P12724 160 aaKnown RBP11.86□□□□□ -0.51
SSRP1-202ENST00000293880 SHISA2Q6UWI4 295 aa11.86□□□□□ -0.51
SSRP1-202ENST00000293880 Q6ZVQ6 151 aa11.86□□□□□ -0.51
SSRP1-202ENST00000293880 LST1O00453 97 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms