RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 A0A0J9YY99 117 aa8.95□□□□□ -0.98
SYNGAP1-201ENST00000293748 GPHB5Q86YW7 130 aa8.95□□□□□ -0.98
SYNGAP1-201ENST00000293748 FANCD2OSQ96PS1 177 aa8.95□□□□□ -0.98
SYNGAP1-201ENST00000293748 PROP1O75360 226 aa8.95□□□□□ -0.98
SYNGAP1-201ENST00000293748 UBE2BP63146 152 aa8.95□□□□□ -0.98
SYNGAP1-201ENST00000293748 ZFHX4Q86UP3 3567 aa8.95□□□□□ -0.98
SYNGAP1-201ENST00000293748 CCL24O00175 119 aa8.95□□□□□ -0.98
SYNGAP1-201ENST00000293748 A0A0J9YXY3 114 aa8.95□□□□□ -0.98
SYNGAP1-201ENST00000293748 APRG1Q8IVJ8 170 aa8.95□□□□□ -0.98
SYNGAP1-201ENST00000293748 TRBV10-1A0A0K0K1A3 114 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 CGB3P0DN86 165 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 CGB7P0DN87 165 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 BRWD1-AS2P59051 145 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 PLXNB1O43157 2135 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 CENPEQ02224 2701 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 BLCAPP62952 87 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 LINC00574Q9H8X3 128 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 IGHV4-4A0A075B6R2 117 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 ZNF80P51504 273 aaPredicted RBP8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 HIST2H2BDQ6DRA6 164 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 TENM4Q6N022 2769 aa8.94□□□□□ -0.98
SYNGAP1-201ENST00000293748 TMEM89A2RUT3 159 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 NDUFB1O75438 58 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 ODF3BA8MYP8 253 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 NDUFS5O43920 106 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 HIGD2BQ4VC39 106 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 Q6ZPA2 131 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 NEXN-AS1Q8NBZ9 246 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 DIRC1Q969H9 104 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 PKIGQ9Y2B9 76 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 NDUFA1O15239 70 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 SLURP1P55000 103 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 CRIP3Q6Q6R5 217 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 TANC2Q9HCD6 1990 aa8.93□□□□□ -0.98
SYNGAP1-201ENST00000293748 ACANP16112 2415 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 ASH1LQ9NR48 2969 aaKnown RBP8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 DEFB136Q30KP8 78 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 SONP18583 2426 aaKnown RBP8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 C2CD3Q4AC94 2353 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 NFE4Q86UQ8 179 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 DSCAML1Q8TD84 2053 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 IGLV10-54A0A075B6I4 117 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 A0A0J9YX75 114 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 ATP5EP2Q5VTU8 51 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 SPATA25Q9BR10 227 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 C14orf132Q9NPU4 83 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 TEX49A0A1B0GTD5 131 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 FSHBP01225 129 aa8.92□□□□□ -0.98
SYNGAP1-201ENST00000293748 IGHV4-28A0A0C4DH34 117 aa8.91□□□□□ -0.98
SYNGAP1-201ENST00000293748 P0DMU3 169 aa8.91□□□□□ -0.98
SYNGAP1-201ENST00000293748 FAM231AP0DMU4 169 aa8.91□□□□□ -0.98
SYNGAP1-201ENST00000293748 FAM231CP0DMU5 169 aa8.91□□□□□ -0.98
SYNGAP1-201ENST00000293748 CLPSL1A2RUU4 121 aa8.91□□□□□ -0.98
SYNGAP1-201ENST00000293748 C1orf229Q6ZS94 237 aaPredicted RBP8.91□□□□□ -0.98
SYNGAP1-201ENST00000293748 Q9HAA7 133 aa8.91□□□□□ -0.98
SYNGAP1-201ENST00000293748 SPART-AS1P0CW21 52 aa8.9□□□□□ -0.98
SYNGAP1-201ENST00000293748 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
SYNGAP1-201ENST00000293748 TP73-AS1Q9UF72 201 aa8.9□□□□□ -0.98
SYNGAP1-201ENST00000293748 IGKV2D-26A0A0A0MRZ7 120 aa8.9□□□□□ -0.99
SYNGAP1-201ENST00000293748 TLN2Q9Y4G6 2542 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 EIF4EBP1Q13541 118 aaPredicted RBP8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 C20orf197Q8N268 126 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 ITPR3Q14573 2671 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 TRBV30A0A0K0K1B3 111 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 TRBV12-3P01733 135 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 C3orf22Q8N5N4 141 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 BRK1Q8WUW1 75 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 U3KQK5 164 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 TRAV23DV6A0A075B6W5 121 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 ODF3Q96PU9 254 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 SORL1Q92673 2214 aa8.89□□□□□ -0.99
SYNGAP1-201ENST00000293748 NDUFA7O95182 113 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 DEFB1P60022 68 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 RPL18AQ02543 176 aaKnown RBP8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 COL12A1Q99715 3063 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 MAST4O15021 2626 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 IGHV4OR15-8A0A075B7B6 117 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 A0A087WW49 117 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 NCR3O14931 201 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 IGHV3-33P01772 117 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 SHISA2Q6UWI4 295 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 UPK3BQ9BT76 320 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 IMUPQ9GZP8 106 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 MAPKAPK5-AS1Q8N8E1 139 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 HHLA3Q9XRX5 114 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 A6NDX4 124 aa8.88□□□□□ -0.99
SYNGAP1-201ENST00000293748 FAM236DA0A1B0GTK5 79 aa8.87□□□□□ -0.99
SYNGAP1-201ENST00000293748 FAM236CP0DP71 79 aa8.87□□□□□ -0.99
SYNGAP1-201ENST00000293748 UNQ9165/PRO28630Q6UXU0 137 aa8.87□□□□□ -0.99
SYNGAP1-201ENST00000293748 CHKB-CPT1BH3BT56 60 aa8.87□□□□□ -0.99
SYNGAP1-201ENST00000293748 C2orf91Q6ZV80 131 aa8.87□□□□□ -0.99
SYNGAP1-201ENST00000293748 TMEM223A0PJW6 202 aa8.86□□□□□ -0.99
SYNGAP1-201ENST00000293748 MYCNOSP40205 109 aa8.86□□□□□ -0.99
SYNGAP1-201ENST00000293748 FLNAP21333 2647 aaKnown RBP8.86□□□□□ -0.99
SYNGAP1-201ENST00000293748 CEMP1Q6PRD7 247 aaPredicted RBP8.86□□□□□ -0.99
SYNGAP1-201ENST00000293748 TRIAP1O43715 76 aa8.86□□□□□ -0.99
SYNGAP1-201ENST00000293748 COX7BP24311 80 aa8.86□□□□□ -0.99
SYNGAP1-201ENST00000293748 TMEM263Q8WUH6 116 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms