RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 LINC00308Q8TCZ7 52 aa8.1□□□□□ -1.11
PKNOX1-201ENST00000291547 NCOR2Q9Y618 2525 aa8.1□□□□□ -1.11
PKNOX1-201ENST00000291547 IGKV1D-37A0A075B6S9 117 aa8.1□□□□□ -1.11
PKNOX1-201ENST00000291547 LINC00269Q8N2A0 174 aa8.1□□□□□ -1.11
PKNOX1-201ENST00000291547 PIK3CD-AS1Q5SR53 167 aa8.09□□□□□ -1.11
PKNOX1-201ENST00000291547 WFDC10BQ8IUB3 73 aa8.09□□□□□ -1.11
PKNOX1-201ENST00000291547 Q8N7P7 452 aa8.09□□□□□ -1.11
PKNOX1-201ENST00000291547 PRORYQ9H606 182 aa8.09□□□□□ -1.11
PKNOX1-201ENST00000291547 A6NED7 52 aa8.09□□□□□ -1.11
PKNOX1-201ENST00000291547 SNURFQ9Y675 71 aa8.09□□□□□ -1.11
PKNOX1-201ENST00000291547 U3KQK5 164 aa8.09□□□□□ -1.11
PKNOX1-201ENST00000291547 TRBV30A0A0K0K1B3 111 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 C5orf42Q9H799 3197 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 REG3AQ06141 175 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 PRR4Q16378 134 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 Q6ZTI0 123 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 LINC00467Q9BRT7 94 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 CCKP06307 115 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 C1orf195Q5TG92 126 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 FAM19A3Q7Z5A8 133 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 TIMM17BO60830 172 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 C1orf158Q8N1D5 194 aa8.08□□□□□ -1.12
PKNOX1-201ENST00000291547 LAMA3Q16787 3333 aa8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 TMEM223A0PJW6 202 aa8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 NDUFC1O43677 76 aa8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 URB1-AS1Q96HZ7 61 aa8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 IGF2RP11717 2491 aa8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 ZFP36P26651 326 aaKnown RBP8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 DEFB113Q30KQ7 82 aa8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 PRR15LQ9BU68 103 aa8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 TNRC6BQ9UPQ9 1833 aaKnown RBP8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 IGLV4-3A0A075B6K6 122 aa8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 C6orf99Q4VX62 202 aa8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 MYCNOSP40205 109 aa8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 ATP5EP56381 51 aaPredicted RBP8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 CHCHD10Q8WYQ3 142 aaPredicted RBP8.07□□□□□ -1.12
PKNOX1-201ENST00000291547 A0A0J9YWU9 116 aa8.06□□□□□ -1.12
PKNOX1-201ENST00000291547 IBA57-AS1B1ANH7 110 aa8.06□□□□□ -1.12
PKNOX1-201ENST00000291547 FAM19A1Q7Z5A9 133 aa8.06□□□□□ -1.12
PKNOX1-201ENST00000291547 XAGE1AQ9HD64 81 aa8.06□□□□□ -1.12
PKNOX1-201ENST00000291547 TMEM89A2RUT3 159 aa8.06□□□□□ -1.12
PKNOX1-201ENST00000291547 CCDC168Q8NDH2 2452 aa8.06□□□□□ -1.12
PKNOX1-201ENST00000291547 MAP6D1Q9H9H5 199 aa8.06□□□□□ -1.12
PKNOX1-201ENST00000291547 C3orf84H3BNL1 204 aa8.05□□□□□ -1.12
PKNOX1-201ENST00000291547 CRIP3Q6Q6R5 217 aa8.05□□□□□ -1.12
PKNOX1-201ENST00000291547 PRO0628Q9UI54 55 aa8.05□□□□□ -1.12
PKNOX1-201ENST00000291547 ABCA2Q9BZC7 2435 aa8.05□□□□□ -1.12
PKNOX1-201ENST00000291547 WIPF1O43516 503 aa8.05□□□□□ -1.12
PKNOX1-201ENST00000291547 ADORA2A-AS1P86434 159 aa8.05□□□□□ -1.12
PKNOX1-201ENST00000291547 ZFAND3Q9H8U3 227 aa8.05□□□□□ -1.12
PKNOX1-201ENST00000291547 SMAD5-AS1Q9Y6J3 95 aa8.04□□□□□ -1.12
PKNOX1-201ENST00000291547 CCDC140Q96MF4 163 aa8.04□□□□□ -1.12
PKNOX1-201ENST00000291547 C4orf3Q8WVX3 66 aa8.04□□□□□ -1.12
PKNOX1-201ENST00000291547 UBE2D3P61077 147 aa8.03□□□□□ -1.12
PKNOX1-201ENST00000291547 UBE2D2P62837 147 aa8.03□□□□□ -1.12
PKNOX1-201ENST00000291547 HRCT1Q6UXD1 115 aa8.03□□□□□ -1.12
PKNOX1-201ENST00000291547 WFDC13Q8IUB5 93 aa8.03□□□□□ -1.12
PKNOX1-201ENST00000291547 A0A087WZ39 114 aa8.03□□□□□ -1.12
PKNOX1-201ENST00000291547 HIVEP3Q5T1R4 2406 aa8.03□□□□□ -1.12
PKNOX1-201ENST00000291547 TRBV27A0A0K0K1C4 114 aa8.03□□□□□ -1.12
PKNOX1-201ENST00000291547 IGF1P05019 195 aa8.03□□□□□ -1.12
PKNOX1-201ENST00000291547 Q8N9L7 120 aa8.03□□□□□ -1.12
PKNOX1-201ENST00000291547 MYO9AB2RTY4 2548 aa8.02□□□□□ -1.13
PKNOX1-201ENST00000291547 DCANP1Q8TF63 244 aa8.02□□□□□ -1.13
PKNOX1-201ENST00000291547 TRBV7-7A0A0K0K1E9 115 aa8.02□□□□□ -1.13
PKNOX1-201ENST00000291547 Q6ZQY7 126 aa8.02□□□□□ -1.13
PKNOX1-201ENST00000291547 PRO0461Q9UI25 63 aa8.02□□□□□ -1.13
PKNOX1-201ENST00000291547 C14orf177Q52M58 125 aa8.02□□□□□ -1.13
PKNOX1-201ENST00000291547 NCOA6Q14686 2063 aaPredicted RBP8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 MRPS36P82909 103 aaKnown RBP8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 MSMPQ1L6U9 139 aa8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 FAM222AQ5U5X8 452 aa8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 LRCOL1A6NCL2 159 aa8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 KLK5Q9Y337 293 aaPredicted RBP8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 A8MZ25 164 aa8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 BRWD1-AS2P59051 145 aa8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 Q6ZPA2 131 aa8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 MED12LQ86YW9 2145 aa8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 ODF3Q96PU9 254 aa8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 LINC01548A6NM66 108 aa8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 LST1O00453 97 aa8.01□□□□□ -1.13
PKNOX1-201ENST00000291547 PRRC2AP48634 2157 aaKnown RBP8□□□□□ -1.13
PKNOX1-201ENST00000291547 TRBV6-5A0A0K0K1A5 114 aa8□□□□□ -1.13
PKNOX1-201ENST00000291547 A6NDX4 124 aa8□□□□□ -1.13
PKNOX1-201ENST00000291547 FBXL19-AS1Q494R0 122 aa8□□□□□ -1.13
PKNOX1-201ENST00000291547 KIR2DL5BQ8NHK3 375 aa8□□□□□ -1.13
PKNOX1-201ENST00000291547 M0QY20 66 aa8□□□□□ -1.13
PKNOX1-201ENST00000291547 SMIM26A0A096LP01 95 aa8□□□□□ -1.13
PKNOX1-201ENST00000291547 K7EQG2 157 aa8□□□□□ -1.13
PKNOX1-201ENST00000291547 ADAMTS20P59510 1910 aa7.99□□□□□ -1.13
PKNOX1-201ENST00000291547 F8WDY8 70 aa7.99□□□□□ -1.13
PKNOX1-201ENST00000291547 H7C423 109 aa7.99□□□□□ -1.13
PKNOX1-201ENST00000291547 CRIP1P50238 77 aa7.99□□□□□ -1.13
PKNOX1-201ENST00000291547 C11orf45Q8TAV5 145 aa7.99□□□□□ -1.13
PKNOX1-201ENST00000291547 RNF185Q96GF1 192 aa7.99□□□□□ -1.13
PKNOX1-201ENST00000291547 SERP1Q9Y6X1 66 aa7.99□□□□□ -1.13
PKNOX1-201ENST00000291547 NCKAP5O14513 1909 aa7.99□□□□□ -1.13
PKNOX1-201ENST00000291547 LAMA2P24043 3122 aaKnown RBP7.99□□□□□ -1.13
PKNOX1-201ENST00000291547 CEP295Q9C0D2 2601 aa7.99□□□□□ -1.13
PKNOX1-201ENST00000291547 ZNF462Q96JM2 2506 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms