RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 EBI3Q14213 229 aa9.96□□□□□ -0.81
SMARCA5-201ENST00000283131 RPL28P46779 137 aaKnown RBP9.96□□□□□ -0.82
SMARCA5-201ENST00000283131 Q6ZQY7 126 aa9.96□□□□□ -0.82
SMARCA5-201ENST00000283131 IGF1P05019 195 aa9.96□□□□□ -0.82
SMARCA5-201ENST00000283131 CDPF1Q6NVV7 123 aa9.96□□□□□ -0.82
SMARCA5-201ENST00000283131 COL5A3P25940 1745 aaPredicted RBP9.95□□□□□ -0.82
SMARCA5-201ENST00000283131 C22orf34Q6ZV56 151 aa9.95□□□□□ -0.82
SMARCA5-201ENST00000283131 DAZAP2Q15038 168 aaPredicted RBP9.95□□□□□ -0.82
SMARCA5-201ENST00000283131 KIF26AQ9ULI4 1882 aaPredicted RBP9.95□□□□□ -0.82
SMARCA5-201ENST00000283131 NUPR2A6NF83 97 aa9.95□□□□□ -0.82
SMARCA5-201ENST00000283131 Q6Q795 121 aa9.95□□□□□ -0.82
SMARCA5-201ENST00000283131 ODF3Q96PU9 254 aa9.95□□□□□ -0.82
SMARCA5-201ENST00000283131 MGAMO43451 1857 aa9.95□□□□□ -0.82
SMARCA5-201ENST00000283131 LINC00208Q96KT6 92 aa9.95□□□□□ -0.82
SMARCA5-201ENST00000283131 SHISA2Q6UWI4 295 aa9.94□□□□□ -0.82
SMARCA5-201ENST00000283131 C19orf71A6NCJ1 209 aa9.94□□□□□ -0.82
SMARCA5-201ENST00000283131 TRIAP1O43715 76 aa9.94□□□□□ -0.82
SMARCA5-201ENST00000283131 LST1O00453 97 aa9.94□□□□□ -0.82
SMARCA5-201ENST00000283131 ZNF843Q8N446 348 aa9.94□□□□□ -0.82
SMARCA5-201ENST00000283131 UNQ9165/PRO28630Q6UXU0 137 aa9.94□□□□□ -0.82
SMARCA5-201ENST00000283131 C1orf147Q96MC9 270 aaPredicted RBP9.94□□□□□ -0.82
SMARCA5-201ENST00000283131 VPREB1P12018 145 aa9.94□□□□□ -0.82
SMARCA5-201ENST00000283131 NUPR1O60356 82 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 GPR179Q6PRD1 2367 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 TRBV30A0A0K0K1B3 111 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 LOC100131303A0A0U1RQF7 123 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 PLXNA3P51805 1871 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 PATE2Q6UY27 113 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 POM121L12Q8N7R1 296 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 FAM167A-AS1Q96KT0 104 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 COX7CP15954 63 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 PROK2Q9HC23 129 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 CACNA1AO00555 2505 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 DENND4CQ5VZ89 1909 aa9.93□□□□□ -0.82
SMARCA5-201ENST00000283131 SERTAD4-AS1Q5TG53 156 aa9.92□□□□□ -0.82
SMARCA5-201ENST00000283131 TP53TG3Q9ULZ0 132 aa9.92□□□□□ -0.82
SMARCA5-201ENST00000283131 CELA1Q9UNI1 258 aa9.92□□□□□ -0.82
SMARCA5-201ENST00000283131 Q8N976 141 aa9.91□□□□□ -0.82
SMARCA5-201ENST00000283131 RETNLBQ9BQ08 111 aa9.91□□□□□ -0.82
SMARCA5-201ENST00000283131 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
SMARCA5-201ENST00000283131 COX17Q14061 63 aa9.9□□□□□ -0.82
SMARCA5-201ENST00000283131 BRWD3Q6RI45 1802 aa9.9□□□□□ -0.82
SMARCA5-201ENST00000283131 IGHV6-1A0A0B4J1U7 121 aa9.9□□□□□ -0.82
SMARCA5-201ENST00000283131 IGF2-ASQ6U949 168 aa9.9□□□□□ -0.82
SMARCA5-201ENST00000283131 THSD7AQ9UPZ6 1657 aa9.9□□□□□ -0.82
SMARCA5-201ENST00000283131 KPRPQ5T749 579 aaPredicted RBP9.9□□□□□ -0.82
SMARCA5-201ENST00000283131 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.82
SMARCA5-201ENST00000283131 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.9□□□□□ -0.82
SMARCA5-201ENST00000283131 NOTCH2Q04721 2471 aa9.9□□□□□ -0.83
SMARCA5-201ENST00000283131 IGLV4-3A0A075B6K6 122 aa9.9□□□□□ -0.83
SMARCA5-201ENST00000283131 C11orf53Q8IXP5 236 aa9.9□□□□□ -0.83
SMARCA5-201ENST00000283131 ZNF106Q9H2Y7 1883 aaKnown RBP9.89□□□□□ -0.83
SMARCA5-201ENST00000283131 SOSTDC1Q6X4U4 206 aa9.89□□□□□ -0.83
SMARCA5-201ENST00000283131 TRBV6-4A0A1B0GX49 114 aa9.89□□□□□ -0.83
SMARCA5-201ENST00000283131 PYGO1Q9Y3Y4 419 aa9.89□□□□□ -0.83
SMARCA5-201ENST00000283131 TRAV7A0A075B6U4 112 aa9.88□□□□□ -0.83
SMARCA5-201ENST00000283131 NANOS2P60321 138 aaKnown RBP9.88□□□□□ -0.83
SMARCA5-201ENST00000283131 LRRC75A-AS1Q8N1F1 130 aa9.88□□□□□ -0.83
SMARCA5-201ENST00000283131 SPRNQ5BIV9 151 aa9.88□□□□□ -0.83
SMARCA5-201ENST00000283131 DEFB114Q30KQ6 69 aa9.87□□□□□ -0.83
SMARCA5-201ENST00000283131 MRPS12O15235 138 aaKnown RBP9.87□□□□□ -0.83
SMARCA5-201ENST00000283131 LINC01547P58512 204 aaPredicted RBP9.87□□□□□ -0.83
SMARCA5-201ENST00000283131 MUC6Q6W4X9 2439 aa9.87□□□□□ -0.83
SMARCA5-201ENST00000283131 ACACBO00763 2458 aa9.87□□□□□ -0.83
SMARCA5-201ENST00000283131 ZNF22P17026 224 aaPredicted RBP9.87□□□□□ -0.83
SMARCA5-201ENST00000283131 RSPO1Q2MKA7 263 aaPredicted RBP9.87□□□□□ -0.83
SMARCA5-201ENST00000283131 ZNF73O43830 326 aaPredicted RBP9.86□□□□□ -0.83
SMARCA5-201ENST00000283131 LELP1Q5T871 98 aa9.86□□□□□ -0.83
SMARCA5-201ENST00000283131 PSPHP1O15172 72 aa9.86□□□□□ -0.83
SMARCA5-201ENST00000283131 Q6ZSR3 168 aa9.86□□□□□ -0.83
SMARCA5-201ENST00000283131 SMIM11BQ8TCY0 68 aa9.86□□□□□ -0.83
SMARCA5-201ENST00000283131 BEAN1Q3B7T3 259 aa9.85□□□□□ -0.83
SMARCA5-201ENST00000283131 LINC00337Q8N6G1 96 aa9.85□□□□□ -0.83
SMARCA5-201ENST00000283131 NRACQ8N912 160 aa9.85□□□□□ -0.83
SMARCA5-201ENST00000283131 M0QXV9 152 aa9.85□□□□□ -0.83
SMARCA5-201ENST00000283131 IGLV3-1P01715 115 aa9.85□□□□□ -0.83
SMARCA5-201ENST00000283131 PLA2G2CQ5R387 149 aa9.85□□□□□ -0.83
SMARCA5-201ENST00000283131 PCOTHQ58A44 107 aa9.85□□□□□ -0.83
SMARCA5-201ENST00000283131 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
SMARCA5-201ENST00000283131 INAFM1C9JVW0 142 aa9.84□□□□□ -0.83
SMARCA5-201ENST00000283131 LINC00482Q8N8I6 264 aa9.84□□□□□ -0.83
SMARCA5-201ENST00000283131 BBC3Q96PG8 261 aaPredicted RBP9.84□□□□□ -0.83
SMARCA5-201ENST00000283131 WDR90Q96KV7 1748 aa9.84□□□□□ -0.83
SMARCA5-201ENST00000283131 RBX1P62877 108 aa9.84□□□□□ -0.83
SMARCA5-201ENST00000283131 HIVEP3Q5T1R4 2406 aa9.84□□□□□ -0.83
SMARCA5-201ENST00000283131 NUP210Q8TEM1 1887 aaPredicted RBP9.84□□□□□ -0.83
SMARCA5-201ENST00000283131 MUC7Q8TAX7 377 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 TNFRSF13BO14836 293 aaPredicted RBP9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 ADORA2A-AS1P86434 159 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 F8P00451 2351 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 IGLV5-52A0A0A0MRZ9 124 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 PIP4P1Q86T03 277 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 Q8N7P7 452 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 NUP210LQ5VU65 1888 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 TRBV7-7A0A0K0K1E9 115 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 SPAG11AQ6PDA7 123 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 ZNF524Q96C55 264 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 C1orf137Q5JT78 98 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 REG3GQ6UW15 175 aa9.83□□□□□ -0.84
SMARCA5-201ENST00000283131 H0Y9P7 68 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms