RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 NCR3O14931 201 aa10.11□□□□□ -0.79
NPC1-201ENST00000269228 CRYGDP07320 174 aa10.11□□□□□ -0.79
NPC1-201ENST00000269228 HAMPP81172 84 aa10.11□□□□□ -0.79
NPC1-201ENST00000269228 RNF183Q96D59 192 aa10.11□□□□□ -0.79
NPC1-201ENST00000269228 KIR2DL5BQ8NHK3 375 aa10.1□□□□□ -0.79
NPC1-201ENST00000269228 RNF185Q96GF1 192 aa10.1□□□□□ -0.79
NPC1-201ENST00000269228 TNRC6BQ9UPQ9 1833 aaKnown RBP10.1□□□□□ -0.79
NPC1-201ENST00000269228 Q8N976 141 aa10.1□□□□□ -0.79
NPC1-201ENST00000269228 IGHV4-30-4P0DP06 118 aa10.1□□□□□ -0.79
NPC1-201ENST00000269228 TRBV6-8A0A0A6YYG3 113 aa10.1□□□□□ -0.79
NPC1-201ENST00000269228 RPL32P62910 135 aaKnown RBP10.1□□□□□ -0.79
NPC1-201ENST00000269228 CHCHD10Q8WYQ3 142 aaPredicted RBP10.1□□□□□ -0.79
NPC1-201ENST00000269228 FXYD2P54710 66 aa10.09□□□□□ -0.79
NPC1-201ENST00000269228 WFDC2Q14508 124 aa10.09□□□□□ -0.79
NPC1-201ENST00000269228 CRYBA4P53673 196 aa10.09□□□□□ -0.79
NPC1-201ENST00000269228 UBL5Q9BZL1 73 aa10.09□□□□□ -0.79
NPC1-201ENST00000269228 PCNTO95613 3336 aa10.09□□□□□ -0.79
NPC1-201ENST00000269228 BAALC-AS2P0C853 105 aa10.09□□□□□ -0.79
NPC1-201ENST00000269228 TRAV10A0A0B4J240 114 aa10.08□□□□□ -0.8
NPC1-201ENST00000269228 ORMDL1Q9P0S3 153 aa10.08□□□□□ -0.8
NPC1-201ENST00000269228 PTPRBP23467 1997 aa10.08□□□□□ -0.8
NPC1-201ENST00000269228 IGKV2-24A0A0C4DH68 120 aa10.08□□□□□ -0.8
NPC1-201ENST00000269228 MRPS12O15235 138 aaKnown RBP10.08□□□□□ -0.8
NPC1-201ENST00000269228 CDKN2A-AS1Q9UH64 79 aa10.08□□□□□ -0.8
NPC1-201ENST00000269228 NTN5Q8WTR8 489 aaPredicted RBP10.08□□□□□ -0.8
NPC1-201ENST00000269228 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
NPC1-201ENST00000269228 IGLV4-3A0A075B6K6 122 aa10.07□□□□□ -0.8
NPC1-201ENST00000269228 IGLV1-51P01701 117 aa10.07□□□□□ -0.8
NPC1-201ENST00000269228 C16orf95Q9H693 158 aa10.07□□□□□ -0.8
NPC1-201ENST00000269228 LOC100131303A0A0U1RQF7 123 aa10.07□□□□□ -0.8
NPC1-201ENST00000269228 HIGD1BQ9P298 99 aa10.07□□□□□ -0.8
NPC1-201ENST00000269228 CHD7Q9P2D1 2997 aa10.06□□□□□ -0.8
NPC1-201ENST00000269228 SPATA12Q7Z6I5 190 aa10.06□□□□□ -0.8
NPC1-201ENST00000269228 G3V4G9 280 aa10.06□□□□□ -0.8
NPC1-201ENST00000269228 H0YGX0 51 aa10.06□□□□□ -0.8
NPC1-201ENST00000269228 NFE4Q86UQ8 179 aa10.06□□□□□ -0.8
NPC1-201ENST00000269228 KPRPQ5T749 579 aaPredicted RBP10.06□□□□□ -0.8
NPC1-201ENST00000269228 C9orf85Q96MD7 179 aa10.06□□□□□ -0.8
NPC1-201ENST00000269228 H7C423 109 aa10.05□□□□□ -0.8
NPC1-201ENST00000269228 RBX1P62877 108 aa10.05□□□□□ -0.8
NPC1-201ENST00000269228 UBE2AP49459 152 aa10.05□□□□□ -0.8
NPC1-201ENST00000269228 TMEM258P61165 79 aa10.04□□□□□ -0.8
NPC1-201ENST00000269228 RBMY1FQ15415 496 aaKnown RBP10.04□□□□□ -0.8
NPC1-201ENST00000269228 TRBV27A0A0K0K1C4 114 aa10.04□□□□□ -0.8
NPC1-201ENST00000269228 TP73-AS1Q9UF72 201 aa10.04□□□□□ -0.8
NPC1-201ENST00000269228 ZNF580Q9UK33 172 aa10.04□□□□□ -0.8
NPC1-201ENST00000269228 U3KQK5 164 aa10.04□□□□□ -0.8
NPC1-201ENST00000269228 C14orf177Q52M58 125 aa10.03□□□□□ -0.8
NPC1-201ENST00000269228 BRI3O95415 125 aa10.03□□□□□ -0.8
NPC1-201ENST00000269228 TRBV6-5A0A0K0K1A5 114 aa10.03□□□□□ -0.8
NPC1-201ENST00000269228 A0A0J9YWU9 116 aa10.03□□□□□ -0.8
NPC1-201ENST00000269228 TRACP01848 142 aa10.03□□□□□ -0.8
NPC1-201ENST00000269228 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
NPC1-201ENST00000269228 NANOS2P60321 138 aaKnown RBP10.03□□□□□ -0.8
NPC1-201ENST00000269228 IGLV2-18A0A075B6J9 118 aa10.02□□□□□ -0.8
NPC1-201ENST00000269228 NRACQ8N912 160 aa10.02□□□□□ -0.81
NPC1-201ENST00000269228 MRGPRG-AS1Q2M3A8 158 aa10.02□□□□□ -0.81
NPC1-201ENST00000269228 GAS8-AS1O95177 125 aa10.02□□□□□ -0.81
NPC1-201ENST00000269228 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.81
NPC1-201ENST00000269228 RETNQ9HD89 108 aa10.02□□□□□ -0.81
NPC1-201ENST00000269228 A0A0J9YXY3 114 aa10.01□□□□□ -0.81
NPC1-201ENST00000269228 TSHBP01222 138 aa10.01□□□□□ -0.81
NPC1-201ENST00000269228 NDUFC2O95298 119 aa10.01□□□□□ -0.81
NPC1-201ENST00000269228 CLUHP3Q96NS8 147 aa10.01□□□□□ -0.81
NPC1-201ENST00000269228 LECT2O14960 151 aa10.01□□□□□ -0.81
NPC1-201ENST00000269228 DIRC1Q969H9 104 aa10□□□□□ -0.81
NPC1-201ENST00000269228 hADV29S1A0JD25 119 aa10□□□□□ -0.81
NPC1-201ENST00000269228 YPEL4Q96NS1 127 aa10□□□□□ -0.81
NPC1-201ENST00000269228 RANBP2P49792 3224 aaKnown RBP10□□□□□ -0.81
NPC1-201ENST00000269228 HECTD1Q9ULT8 2610 aa10□□□□□ -0.81
NPC1-201ENST00000269228 IGLV2-33A0A075B6J2 118 aaPredicted RBP10□□□□□ -0.81
NPC1-201ENST00000269228 MIAQ16674 131 aa9.99□□□□□ -0.81
NPC1-201ENST00000269228 PCSK5Q92824 1860 aa9.98□□□□□ -0.81
NPC1-201ENST00000269228 F8P00451 2351 aa9.98□□□□□ -0.81
NPC1-201ENST00000269228 POLR2KP53803 58 aaKnown RBP9.98□□□□□ -0.81
NPC1-201ENST00000269228 M0R2N4 97 aa9.98□□□□□ -0.81
NPC1-201ENST00000269228 ANKRD29Q8N6D5 301 aa9.98□□□□□ -0.81
NPC1-201ENST00000269228 TMEM223A0PJW6 202 aa9.98□□□□□ -0.81
NPC1-201ENST00000269228 FUSP35637 526 aaKnown RBP eCLIP9.98□□□□□ -0.81
NPC1-201ENST00000269228 CLEC2BQ92478 149 aa9.98□□□□□ -0.81
NPC1-201ENST00000269228 LINC01620Q4KN68 170 aa9.98□□□□□ -0.81
NPC1-201ENST00000269228 C5orf42Q9H799 3197 aa9.98□□□□□ -0.81
NPC1-201ENST00000269228 LELP1Q5T871 98 aa9.97□□□□□ -0.81
NPC1-201ENST00000269228 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
NPC1-201ENST00000269228 HTTP42858 3142 aa9.97□□□□□ -0.81
NPC1-201ENST00000269228 C1orf158Q8N1D5 194 aa9.97□□□□□ -0.81
NPC1-201ENST00000269228 FOXI1Q12951 378 aa9.97□□□□□ -0.81
NPC1-201ENST00000269228 PTH2Q96A98 100 aa9.96□□□□□ -0.81
NPC1-201ENST00000269228 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.81
NPC1-201ENST00000269228 TET2Q6N021 2002 aaPredicted RBP9.96□□□□□ -0.81
NPC1-201ENST00000269228 CNFNQ9BYD5 112 aa9.96□□□□□ -0.82
NPC1-201ENST00000269228 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.82
NPC1-201ENST00000269228 A8MZ25 164 aa9.95□□□□□ -0.82
NPC1-201ENST00000269228 UBE2D3P61077 147 aa9.95□□□□□ -0.82
NPC1-201ENST00000269228 UBE2D2P62837 147 aa9.95□□□□□ -0.82
NPC1-201ENST00000269228 SYCNQ0VAF6 134 aa9.94□□□□□ -0.82
NPC1-201ENST00000269228 IGKV2D-26A0A0A0MRZ7 120 aa9.94□□□□□ -0.82
NPC1-201ENST00000269228 PIK3CD-AS1Q5SR53 167 aa9.94□□□□□ -0.82
NPC1-201ENST00000269228 TEN1Q86WV5 123 aa9.94□□□□□ -0.82
NPC1-201ENST00000269228 UBE2D4Q9Y2X8 147 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms