RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 TNFRSF13BO14836 293 aaPredicted RBP9.42□□□□□ -0.9
CDH11-201ENST00000268603 EBI3Q14213 229 aa9.42□□□□□ -0.9
CDH11-201ENST00000268603 SOSTDC1Q6X4U4 206 aa9.42□□□□□ -0.9
CDH11-201ENST00000268603 CELA1Q9UNI1 258 aa9.42□□□□□ -0.9
CDH11-201ENST00000268603 IBA57-AS1B1ANH7 110 aa9.42□□□□□ -0.9
CDH11-201ENST00000268603 SPTAN1Q13813 2472 aaKnown RBP9.42□□□□□ -0.9
CDH11-201ENST00000268603 RSPO1Q2MKA7 263 aaPredicted RBP9.42□□□□□ -0.9
CDH11-201ENST00000268603 CSDC2Q9Y534 153 aaKnown RBP9.42□□□□□ -0.9
CDH11-201ENST00000268603 SPRY4Q9C004 299 aa9.42□□□□□ -0.9
CDH11-201ENST00000268603 C1orf147Q96MC9 270 aaPredicted RBP9.41□□□□□ -0.9
CDH11-201ENST00000268603 DSCAML1Q8TD84 2053 aa9.41□□□□□ -0.9
CDH11-201ENST00000268603 M0QXV9 152 aa9.41□□□□□ -0.9
CDH11-201ENST00000268603 Q6ZQY7 126 aa9.41□□□□□ -0.9
CDH11-201ENST00000268603 TRBV6-5A0A0K0K1A5 114 aa9.41□□□□□ -0.9
CDH11-201ENST00000268603 LST1O00453 97 aa9.41□□□□□ -0.9
CDH11-201ENST00000268603 LINC00308Q8TCZ7 52 aa9.41□□□□□ -0.9
CDH11-201ENST00000268603 C19orf71A6NCJ1 209 aa9.41□□□□□ -0.9
CDH11-201ENST00000268603 C19orf84I3L1E1 186 aa9.4□□□□□ -0.9
CDH11-201ENST00000268603 TRIAP1O43715 76 aa9.4□□□□□ -0.9
CDH11-201ENST00000268603 LINC01556Q5JQF7 62 aa9.4□□□□□ -0.9
CDH11-201ENST00000268603 PROK1P58294 105 aa9.4□□□□□ -0.91
CDH11-201ENST00000268603 C1orf137Q5JT78 98 aa9.4□□□□□ -0.91
CDH11-201ENST00000268603 CFAP126Q5VTH2 177 aa9.39□□□□□ -0.91
CDH11-201ENST00000268603 Q6ZSV7 163 aa9.39□□□□□ -0.91
CDH11-201ENST00000268603 BEAN1Q3B7T3 259 aa9.39□□□□□ -0.91
CDH11-201ENST00000268603 PCNX1Q96RV3 2341 aa9.39□□□□□ -0.91
CDH11-201ENST00000268603 LINC00208Q96KT6 92 aa9.39□□□□□ -0.91
CDH11-201ENST00000268603 A0A1B0GXF2 115 aa9.38□□□□□ -0.91
CDH11-201ENST00000268603 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
CDH11-201ENST00000268603 CCDC140Q96MF4 163 aa9.38□□□□□ -0.91
CDH11-201ENST00000268603 Q6ZSR3 168 aa9.38□□□□□ -0.91
CDH11-201ENST00000268603 MRPS12O15235 138 aaKnown RBP9.38□□□□□ -0.91
CDH11-201ENST00000268603 PCOTHQ58A44 107 aa9.38□□□□□ -0.91
CDH11-201ENST00000268603 E7EUB6 86 aa9.38□□□□□ -0.91
CDH11-201ENST00000268603 DENND4CQ5VZ89 1909 aa9.38□□□□□ -0.91
CDH11-201ENST00000268603 IGFL2Q6UWQ7 119 aa9.37□□□□□ -0.91
CDH11-201ENST00000268603 PRORYQ9H606 182 aa9.37□□□□□ -0.91
CDH11-201ENST00000268603 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
CDH11-201ENST00000268603 SHANK1Q9Y566 2161 aa9.37□□□□□ -0.91
CDH11-201ENST00000268603 PLXNA4Q9HCM2 1894 aa9.37□□□□□ -0.91
CDH11-201ENST00000268603 SMIM26A0A096LP01 95 aa9.37□□□□□ -0.91
CDH11-201ENST00000268603 LELP1Q5T871 98 aa9.37□□□□□ -0.91
CDH11-201ENST00000268603 PSPHP1O15172 72 aa9.36□□□□□ -0.91
CDH11-201ENST00000268603 RBX1P62877 108 aa9.36□□□□□ -0.91
CDH11-201ENST00000268603 TRBV6-4A0A1B0GX49 114 aa9.36□□□□□ -0.91
CDH11-201ENST00000268603 FAM167A-AS1Q96KT0 104 aa9.36□□□□□ -0.91
CDH11-201ENST00000268603 CD164L2Q6UWJ8 174 aa9.36□□□□□ -0.91
CDH11-201ENST00000268603 PLXNA2O75051 1894 aa9.36□□□□□ -0.91
CDH11-201ENST00000268603 CCDC179H3BU77 68 aa9.35□□□□□ -0.91
CDH11-201ENST00000268603 LINC00694P0DN24 101 aa9.35□□□□□ -0.91
CDH11-201ENST00000268603 CACNA1HO95180 2353 aa9.35□□□□□ -0.91
CDH11-201ENST00000268603 IGLV4-3A0A075B6K6 122 aa9.35□□□□□ -0.91
CDH11-201ENST00000268603 K7EQG2 157 aa9.35□□□□□ -0.91
CDH11-201ENST00000268603 COX7CP15954 63 aa9.34□□□□□ -0.91
CDH11-201ENST00000268603 ZNF80P51504 273 aaPredicted RBP9.34□□□□□ -0.91
CDH11-201ENST00000268603 ODF3Q96PU9 254 aa9.34□□□□□ -0.91
CDH11-201ENST00000268603 ODF3BA8MYP8 253 aa9.34□□□□□ -0.91
CDH11-201ENST00000268603 PRLHP81277 87 aa9.34□□□□□ -0.91
CDH11-201ENST00000268603 REG3GQ6UW15 175 aa9.34□□□□□ -0.91
CDH11-201ENST00000268603 IGLV1-47P01700 117 aa9.33□□□□□ -0.92
CDH11-201ENST00000268603 C1orf134Q5TEV5 83 aa9.33□□□□□ -0.92
CDH11-201ENST00000268603 C10orf99Q6UWK7 81 aa9.33□□□□□ -0.92
CDH11-201ENST00000268603 TRBV30A0A0K0K1B3 111 aa9.33□□□□□ -0.92
CDH11-201ENST00000268603 ZNF22P17026 224 aaPredicted RBP9.33□□□□□ -0.92
CDH11-201ENST00000268603 A8MZ25 164 aa9.33□□□□□ -0.92
CDH11-201ENST00000268603 GDF5OSQ5U4N7 250 aa9.33□□□□□ -0.92
CDH11-201ENST00000268603 ZNF73O43830 326 aaPredicted RBP9.32□□□□□ -0.92
CDH11-201ENST00000268603 CRYGAP11844 174 aa9.32□□□□□ -0.92
CDH11-201ENST00000268603 C6orf223Q8N319 242 aa9.32□□□□□ -0.92
CDH11-201ENST00000268603 MED13LQ71F56 2210 aa9.31□□□□□ -0.92
CDH11-201ENST00000268603 MALRD1Q5VYJ5 2156 aa9.31□□□□□ -0.92
CDH11-201ENST00000268603 FRMPD3Q5JV73 1810 aa9.31□□□□□ -0.92
CDH11-201ENST00000268603 LINC00959A0A1B0GUT2 108 aa9.31□□□□□ -0.92
CDH11-201ENST00000268603 IGLV3-1P01715 115 aa9.31□□□□□ -0.92
CDH11-201ENST00000268603 LMO4P61968 165 aa9.31□□□□□ -0.92
CDH11-201ENST00000268603 MRPS36P82909 103 aaKnown RBP9.31□□□□□ -0.92
CDH11-201ENST00000268603 SBSPONQ8IVN8 264 aa9.31□□□□□ -0.92
CDH11-201ENST00000268603 SMIM11BQ8TCY0 68 aa9.31□□□□□ -0.92
CDH11-201ENST00000268603 FRMD6-AS1P0C7T7 363 aa9.3□□□□□ -0.92
CDH11-201ENST00000268603 PLXNB3Q9ULL4 1909 aa9.3□□□□□ -0.92
CDH11-201ENST00000268603 C18orf65Q6ZTR6 163 aa9.3□□□□□ -0.92
CDH11-201ENST00000268603 C2orf48Q96LS8 159 aa9.3□□□□□ -0.92
CDH11-201ENST00000268603 UTRNP46939 3433 aa9.3□□□□□ -0.92
CDH11-201ENST00000268603 MED13Q9UHV7 2174 aa9.3□□□□□ -0.92
CDH11-201ENST00000268603 PYGO1Q9Y3Y4 419 aa9.29□□□□□ -0.92
CDH11-201ENST00000268603 U3KQK5 164 aa9.29□□□□□ -0.92
CDH11-201ENST00000268603 BRI3O95415 125 aa9.29□□□□□ -0.92
CDH11-201ENST00000268603 LINC01547P58512 204 aaPredicted RBP9.29□□□□□ -0.92
CDH11-201ENST00000268603 IMUPQ9GZP8 106 aa9.28□□□□□ -0.92
CDH11-201ENST00000268603 IGKV2D-30A0A075B6S6 120 aa9.28□□□□□ -0.92
CDH11-201ENST00000268603 IGKV2-30P06310 120 aa9.28□□□□□ -0.92
CDH11-201ENST00000268603 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
CDH11-201ENST00000268603 LINC01006Q8NI28 216 aa9.28□□□□□ -0.92
CDH11-201ENST00000268603 TRBV7-7A0A0K0K1E9 115 aa9.27□□□□□ -0.93
CDH11-201ENST00000268603 DEFB116Q30KQ4 102 aa9.27□□□□□ -0.93
CDH11-201ENST00000268603 SPINT4Q6UDR6 99 aa9.27□□□□□ -0.93
CDH11-201ENST00000268603 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.27□□□□□ -0.93
CDH11-201ENST00000268603 XGP55808 180 aa9.27□□□□□ -0.93
CDH11-201ENST00000268603 SMR3AQ99954 134 aa9.27□□□□□ -0.93
CDH11-201ENST00000268603 PRM2P04554 102 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms