RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 TRBV10-1A0A0K0K1A3 114 aa14.62□□□□□ -0.07
LYSMD2-201ENST00000267838 C11orf86A6NJI1 115 aa14.62□□□□□ -0.07
LYSMD2-201ENST00000267838 LINC00612Q8N6U2 182 aa14.62□□□□□ -0.07
LYSMD2-201ENST00000267838 SLC25A29Q8N8R3 303 aa14.62□□□□□ -0.07
LYSMD2-201ENST00000267838 RPL24P83731 157 aaKnown RBP14.61□□□□□ -0.07
LYSMD2-201ENST00000267838 C20orf203Q8NBC4 194 aa14.61□□□□□ -0.07
LYSMD2-201ENST00000267838 J3QR89 54 aa14.6□□□□□ -0.07
LYSMD2-201ENST00000267838 ZNRF2Q8NHG8 242 aa14.6□□□□□ -0.07
LYSMD2-201ENST00000267838 TRGV4A0A0C4DH28 118 aa14.59□□□□□ -0.07
LYSMD2-201ENST00000267838 DEFB130BP0DP73 79 aa14.59□□□□□ -0.07
LYSMD2-201ENST00000267838 DEFB130AP0DP74 79 aa14.59□□□□□ -0.07
LYSMD2-201ENST00000267838 RPL36AP83881 106 aaKnown RBP14.59□□□□□ -0.07
LYSMD2-201ENST00000267838 SRSF9Q13242 221 aaKnown RBP eCLIP14.59□□□□□ -0.07
LYSMD2-201ENST00000267838 RPL36ALQ969Q0 106 aaKnown RBP14.59□□□□□ -0.07
LYSMD2-201ENST00000267838 RNF183Q96D59 192 aa14.59□□□□□ -0.07
LYSMD2-201ENST00000267838 IGHV3-38A0A0C4DH36 116 aa14.58□□□□□ -0.08
LYSMD2-201ENST00000267838 TRBV6-4A0A1B0GX49 114 aa14.58□□□□□ -0.08
LYSMD2-201ENST00000267838 SPANXB1Q9NS25 103 aaPredicted RBP14.58□□□□□ -0.08
LYSMD2-201ENST00000267838 IGHV4-28A0A0C4DH34 117 aa14.57□□□□□ -0.08
LYSMD2-201ENST00000267838 TEX48A0A1B0GUV7 120 aa14.57□□□□□ -0.08
LYSMD2-201ENST00000267838 A8MZ25 164 aa14.57□□□□□ -0.08
LYSMD2-201ENST00000267838 FHL2Q14192 279 aa14.57□□□□□ -0.08
LYSMD2-201ENST00000267838 LYRM9A8MSI8 78 aa14.57□□□□□ -0.08
LYSMD2-201ENST00000267838 MIFP14174 115 aa14.57□□□□□ -0.08
LYSMD2-201ENST00000267838 UBE2D1P51668 147 aa14.57□□□□□ -0.08
LYSMD2-201ENST00000267838 LYRM7Q5U5X0 104 aa14.57□□□□□ -0.08
LYSMD2-201ENST00000267838 PLEKHB2Q96CS7 222 aa14.57□□□□□ -0.08
LYSMD2-201ENST00000267838 MDFIQ99750 246 aa14.57□□□□□ -0.08
LYSMD2-201ENST00000267838 GAGE13Q4V321 117 aa14.56□□□□□ -0.08
LYSMD2-201ENST00000267838 FAM222AQ5U5X8 452 aa14.56□□□□□ -0.08
LYSMD2-201ENST00000267838 NFE4Q86UQ8 179 aa14.56□□□□□ -0.08
LYSMD2-201ENST00000267838 GAGE12JA6NER3 117 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 GAGE4Q13068 117 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 GAGE5Q13069 117 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 Q8NAQ8 132 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 CHCHD7Q9BUK0 85 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 PGPEP1Q9NXJ5 209 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 CMYA5Q8N3K9 4069 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 A0A0J9YY99 117 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 H3BMG7 143 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 DEFB4AO15263 64 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 UBE2D3P61077 147 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 UBE2D2P62837 147 aa14.55□□□□□ -0.08
LYSMD2-201ENST00000267838 TMEM170BQ5T4T1 132 aa14.54□□□□□ -0.08
LYSMD2-201ENST00000267838 DAZ4Q86SG3 579 aaKnown RBP14.54□□□□□ -0.08
LYSMD2-201ENST00000267838 DAZ3Q9NR90 486 aaKnown RBP14.54□□□□□ -0.08
LYSMD2-201ENST00000267838 WFDC2Q14508 124 aa14.52□□□□□ -0.08
LYSMD2-201ENST00000267838 LOC100131303A0A0U1RQF7 123 aa14.52□□□□□ -0.09
LYSMD2-201ENST00000267838 LGALS3P17931 250 aaKnown RBP14.52□□□□□ -0.09
LYSMD2-201ENST00000267838 PYGO1Q9Y3Y4 419 aa14.52□□□□□ -0.09
LYSMD2-201ENST00000267838 J3QQQ9 107 aa14.51□□□□□ -0.09
LYSMD2-201ENST00000267838 OPRPNQ99935 248 aaPredicted RBP14.51□□□□□ -0.09
LYSMD2-201ENST00000267838 PRO0461Q9UI25 63 aa14.51□□□□□ -0.09
LYSMD2-201ENST00000267838 ANK2Q01484 3957 aa14.5□□□□□ -0.09
LYSMD2-201ENST00000267838 LEPROTO15243 131 aa14.5□□□□□ -0.09
LYSMD2-201ENST00000267838 IGLV4-3A0A075B6K6 122 aa14.5□□□□□ -0.09
LYSMD2-201ENST00000267838 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.5□□□□□ -0.09
LYSMD2-201ENST00000267838 IGKV2-29A2NJV5 120 aaPredicted RBP14.5□□□□□ -0.09
LYSMD2-201ENST00000267838 PKD1L1Q8TDX9 2849 aa14.49□□□□□ -0.09
LYSMD2-201ENST00000267838 TSPAN13O95857 204 aa14.49□□□□□ -0.09
LYSMD2-201ENST00000267838 TMEM223A0PJW6 202 aa14.48□□□□□ -0.09
LYSMD2-201ENST00000267838 IGHV3-30P01768 117 aa14.48□□□□□ -0.09
LYSMD2-201ENST00000267838 IGHV3-30-5P0DP03 117 aa14.48□□□□□ -0.09
LYSMD2-201ENST00000267838 TSPEAR-AS2P59090 65 aa14.48□□□□□ -0.09
LYSMD2-201ENST00000267838 SPANXA1Q9NS26 97 aa14.48□□□□□ -0.09
LYSMD2-201ENST00000267838 UBE2D4Q9Y2X8 147 aa14.48□□□□□ -0.09
LYSMD2-201ENST00000267838 DAD1P61803 113 aa14.47□□□□□ -0.09
LYSMD2-201ENST00000267838 NTM-AS1Q6ZSK4 140 aa14.47□□□□□ -0.09
LYSMD2-201ENST00000267838 ATP6V0E2Q8NHE4 81 aa14.47□□□□□ -0.09
LYSMD2-201ENST00000267838 CELA1Q9UNI1 258 aa14.47□□□□□ -0.09
LYSMD2-201ENST00000267838 CRYBA4P53673 196 aa14.47□□□□□ -0.09
LYSMD2-201ENST00000267838 CEMP1Q6PRD7 247 aaPredicted RBP14.47□□□□□ -0.09
LYSMD2-201ENST00000267838 AMELXQ99217 191 aa14.47□□□□□ -0.09
LYSMD2-201ENST00000267838 SPART-AS1P0CW21 52 aa14.46□□□□□ -0.09
LYSMD2-201ENST00000267838 LINC00694P0DN24 101 aa14.46□□□□□ -0.09
LYSMD2-201ENST00000267838 ETDBQ3ZM63 59 aa14.46□□□□□ -0.09
LYSMD2-201ENST00000267838 FAM104AQ969W3 186 aa14.46□□□□□ -0.09
LYSMD2-201ENST00000267838 GTSF1LQ9H1H1 148 aa14.46□□□□□ -0.09
LYSMD2-201ENST00000267838 VCX2Q9H322 139 aa14.46□□□□□ -0.09
LYSMD2-201ENST00000267838 NBEAL2Q6ZNJ1 2754 aa14.46□□□□□ -0.1
LYSMD2-201ENST00000267838 APOMO95445 188 aa14.45□□□□□ -0.1
LYSMD2-201ENST00000267838 SCGB1A1P11684 91 aa14.45□□□□□ -0.1
LYSMD2-201ENST00000267838 PRO0255Q9UI72 69 aa14.45□□□□□ -0.1
LYSMD2-201ENST00000267838 TRBV20-1A0A075B6N2 111 aa14.45□□□□□ -0.1
LYSMD2-201ENST00000267838 RETNQ9HD89 108 aa14.45□□□□□ -0.1
LYSMD2-201ENST00000267838 LOC107984156A0A0G2JMH3 177 aa14.44□□□□□ -0.1
LYSMD2-201ENST00000267838 ARL17AQ8IVW1 177 aa14.44□□□□□ -0.1
LYSMD2-201ENST00000267838 ZNF22P17026 224 aaPredicted RBP14.43□□□□□ -0.1
LYSMD2-201ENST00000267838 SH2D6Q7Z4S9 175 aa14.43□□□□□ -0.1
LYSMD2-201ENST00000267838 SIGMAR1Q99720 223 aa14.43□□□□□ -0.1
LYSMD2-201ENST00000267838 TIMM21Q9BVV7 248 aa14.43□□□□□ -0.1
LYSMD2-201ENST00000267838 GYPEP15421 78 aa14.42□□□□□ -0.1
LYSMD2-201ENST00000267838 SBSPONQ8IVN8 264 aa14.42□□□□□ -0.1
LYSMD2-201ENST00000267838 C10orf126Q8N4M7 172 aa14.42□□□□□ -0.1
LYSMD2-201ENST00000267838 SPATA25Q9BR10 227 aa14.42□□□□□ -0.1
LYSMD2-201ENST00000267838 GAGE12HA6NDE8 117 aa14.42□□□□□ -0.1
LYSMD2-201ENST00000267838 ATP5G1P05496 136 aa14.42□□□□□ -0.1
LYSMD2-201ENST00000267838 PSMB2P49721 201 aa14.42□□□□□ -0.1
LYSMD2-201ENST00000267838 TMEM238C9JI98 176 aa14.41□□□□□ -0.1
LYSMD2-201ENST00000267838 CFC1BP0CG36 223 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms