RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 SAMD5Q5TGI4 173 aa10.49□□□□□ -0.73
PDLIM2-201ENST00000265810 C1orf43Q9BWL3 253 aa10.49□□□□□ -0.73
PDLIM2-201ENST00000265810 POLR2KP53803 58 aaKnown RBP10.49□□□□□ -0.73
PDLIM2-201ENST00000265810 BEAN1Q3B7T3 259 aa10.49□□□□□ -0.73
PDLIM2-201ENST00000265810 Q9H8V8 135 aa10.49□□□□□ -0.73
PDLIM2-201ENST00000265810 SPATA12Q7Z6I5 190 aa10.48□□□□□ -0.73
PDLIM2-201ENST00000265810 LEPROTO15243 131 aa10.48□□□□□ -0.73
PDLIM2-201ENST00000265810 LRBAP50851 2863 aa10.48□□□□□ -0.73
PDLIM2-201ENST00000265810 RETNQ9HD89 108 aa10.48□□□□□ -0.73
PDLIM2-201ENST00000265810 GTSF1LQ9H1H1 148 aa10.47□□□□□ -0.73
PDLIM2-201ENST00000265810 MAST4O15021 2626 aa10.47□□□□□ -0.73
PDLIM2-201ENST00000265810 RMI2Q96E14 147 aa10.47□□□□□ -0.73
PDLIM2-201ENST00000265810 RNASE8Q8TDE3 154 aaKnown RBP10.46□□□□□ -0.73
PDLIM2-201ENST00000265810 RBMY1FQ15415 496 aaKnown RBP10.46□□□□□ -0.73
PDLIM2-201ENST00000265810 PIK3CD-AS1Q5SR53 167 aa10.46□□□□□ -0.73
PDLIM2-201ENST00000265810 PGPEP1Q9NXJ5 209 aa10.46□□□□□ -0.73
PDLIM2-201ENST00000265810 LINC00310P59036 64 aa10.46□□□□□ -0.74
PDLIM2-201ENST00000265810 TSHBP01222 138 aa10.45□□□□□ -0.74
PDLIM2-201ENST00000265810 CITED1Q99966 193 aa10.45□□□□□ -0.74
PDLIM2-201ENST00000265810 TRBV6-8A0A0A6YYG3 113 aa10.45□□□□□ -0.74
PDLIM2-201ENST00000265810 COX7A2LO14548 114 aa10.45□□□□□ -0.74
PDLIM2-201ENST00000265810 IGLV4-3A0A075B6K6 122 aa10.45□□□□□ -0.74
PDLIM2-201ENST00000265810 CCL25O15444 150 aa10.45□□□□□ -0.74
PDLIM2-201ENST00000265810 Q8N976 141 aa10.45□□□□□ -0.74
PDLIM2-201ENST00000265810 TRAV8-3A0A0A6YYJ7 113 aa10.44□□□□□ -0.74
PDLIM2-201ENST00000265810 UBE2V1Q13404 147 aa10.44□□□□□ -0.74
PDLIM2-201ENST00000265810 URB1-AS1Q96HZ7 61 aa10.44□□□□□ -0.74
PDLIM2-201ENST00000265810 A0A1B0GWB2 263 aa10.44□□□□□ -0.74
PDLIM2-201ENST00000265810 SIVA1O15304 175 aa10.44□□□□□ -0.74
PDLIM2-201ENST00000265810 BVES-AS1Q5T3Y7 98 aa10.44□□□□□ -0.74
PDLIM2-201ENST00000265810 FAM19A4Q96LR4 140 aa10.44□□□□□ -0.74
PDLIM2-201ENST00000265810 MGAM2Q2M2H8 2515 aa10.44□□□□□ -0.74
PDLIM2-201ENST00000265810 TEX15Q9BXT5 2789 aa10.43□□□□□ -0.74
PDLIM2-201ENST00000265810 G3V4G9 280 aa10.43□□□□□ -0.74
PDLIM2-201ENST00000265810 LINC00269Q8N2A0 174 aa10.43□□□□□ -0.74
PDLIM2-201ENST00000265810 E9PLD3 99 aa10.43□□□□□ -0.74
PDLIM2-201ENST00000265810 RPL32P62910 135 aaKnown RBP10.43□□□□□ -0.74
PDLIM2-201ENST00000265810 A0A0J9YWU9 116 aa10.43□□□□□ -0.74
PDLIM2-201ENST00000265810 CEND1Q8N111 149 aa10.42□□□□□ -0.74
PDLIM2-201ENST00000265810 CLUHP3Q96NS8 147 aa10.42□□□□□ -0.74
PDLIM2-201ENST00000265810 GCN1Q92616 2671 aaKnown RBP10.42□□□□□ -0.74
PDLIM2-201ENST00000265810 KLK5Q9Y337 293 aaPredicted RBP10.41□□□□□ -0.74
PDLIM2-201ENST00000265810 NANOS2P60321 138 aaKnown RBP10.41□□□□□ -0.74
PDLIM2-201ENST00000265810 KPRPQ5T749 579 aaPredicted RBP10.4□□□□□ -0.74
PDLIM2-201ENST00000265810 COX7B2Q8TF08 81 aa10.4□□□□□ -0.74
PDLIM2-201ENST00000265810 RNF183Q96D59 192 aa10.4□□□□□ -0.74
PDLIM2-201ENST00000265810 TAL2Q16559 108 aa10.4□□□□□ -0.75
PDLIM2-201ENST00000265810 CR1P17927 2039 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 UBE2D3P61077 147 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 UBE2D2P62837 147 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 CDKN2A-AS1Q9UH64 79 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 K7ERJ3 54 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 SLC25A20O43772 301 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 REG3AQ06141 175 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 Q6ZSN1 163 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 CFAP47Q6ZTR5 3102 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 IGHV1-58A0A0C4DH39 117 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 BOD1L2Q8IYS8 172 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 BAHCC1Q9P281 2608 aa10.39□□□□□ -0.75
PDLIM2-201ENST00000265810 LAMA5O15230 3695 aa10.38□□□□□ -0.75
PDLIM2-201ENST00000265810 TRAV10A0A0B4J240 114 aa10.38□□□□□ -0.75
PDLIM2-201ENST00000265810 HERV-K104P63124 156 aa10.38□□□□□ -0.75
PDLIM2-201ENST00000265810 CAMK2N2Q96S95 79 aa10.38□□□□□ -0.75
PDLIM2-201ENST00000265810 WDFY3Q8IZQ1 3526 aa10.38□□□□□ -0.75
PDLIM2-201ENST00000265810 DAND5Q8N907 189 aa10.38□□□□□ -0.75
PDLIM2-201ENST00000265810 C11orf72Q8NBR9 251 aa10.38□□□□□ -0.75
PDLIM2-201ENST00000265810 ITPR1Q14643 2758 aa10.37□□□□□ -0.75
PDLIM2-201ENST00000265810 TINCRA0A1B0GVN0 87 aa10.37□□□□□ -0.75
PDLIM2-201ENST00000265810 PRSS47A8MTI9 375 aa10.37□□□□□ -0.75
PDLIM2-201ENST00000265810 CRYBA4P53673 196 aa10.37□□□□□ -0.75
PDLIM2-201ENST00000265810 KRTAP10-3P60369 221 aa10.37□□□□□ -0.75
PDLIM2-201ENST00000265810 RBX1P62877 108 aa10.37□□□□□ -0.75
PDLIM2-201ENST00000265810 PYGO1Q9Y3Y4 419 aa10.37□□□□□ -0.75
PDLIM2-201ENST00000265810 H7C423 109 aa10.37□□□□□ -0.75
PDLIM2-201ENST00000265810 EDA2RQ9HAV5 297 aa10.37□□□□□ -0.75
PDLIM2-201ENST00000265810 COX11Q9Y6N1 276 aa10.37□□□□□ -0.75
PDLIM2-201ENST00000265810 DCHS1Q96JQ0 3298 aa10.36□□□□□ -0.75
PDLIM2-201ENST00000265810 FHL2Q14192 279 aa10.36□□□□□ -0.75
PDLIM2-201ENST00000265810 ITPR2Q14571 2701 aa10.36□□□□□ -0.75
PDLIM2-201ENST00000265810 ZNF22P17026 224 aaPredicted RBP10.36□□□□□ -0.75
PDLIM2-201ENST00000265810 PRO1854Q9UHT4 67 aa10.36□□□□□ -0.75
PDLIM2-201ENST00000265810 KIF25-AS1Q9Y6Z4 181 aa10.36□□□□□ -0.75
PDLIM2-201ENST00000265810 GAGE12HA6NDE8 117 aa10.36□□□□□ -0.75
PDLIM2-201ENST00000265810 TP73-AS1Q9UF72 201 aa10.36□□□□□ -0.75
PDLIM2-201ENST00000265810 UBE2D4Q9Y2X8 147 aa10.36□□□□□ -0.75
PDLIM2-201ENST00000265810 SPAG11BQ08648 103 aa10.35□□□□□ -0.75
PDLIM2-201ENST00000265810 TACC2O95359 2948 aa10.35□□□□□ -0.75
PDLIM2-201ENST00000265810 C12orf74Q32Q52 190 aa10.34□□□□□ -0.75
PDLIM2-201ENST00000265810 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
PDLIM2-201ENST00000265810 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
PDLIM2-201ENST00000265810 ASPMQ8IZT6 3477 aa10.34□□□□□ -0.75
PDLIM2-201ENST00000265810 IGKV2D-26A0A0A0MRZ7 120 aa10.34□□□□□ -0.75
PDLIM2-201ENST00000265810 Q6ZTC4 211 aa10.34□□□□□ -0.75
PDLIM2-201ENST00000265810 MUSTN1Q8IVN3 82 aa10.34□□□□□ -0.75
PDLIM2-201ENST00000265810 CHCHD10Q8WYQ3 142 aaPredicted RBP10.34□□□□□ -0.75
PDLIM2-201ENST00000265810 K7EP13 123 aa10.33□□□□□ -0.76
PDLIM2-201ENST00000265810 OCIAD2Q56VL3 154 aa10.33□□□□□ -0.76
PDLIM2-201ENST00000265810 Q6ZVH6 145 aa10.33□□□□□ -0.76
PDLIM2-201ENST00000265810 WFDC9Q8NEX5 89 aa10.33□□□□□ -0.76
PDLIM2-201ENST00000265810 MUC4Q99102 2169 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms