RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 TMEM223A0PJW6 202 aa12.04□□□□□ -0.48
CHKA-201ENST00000265689 FABP2P12104 132 aa12.04□□□□□ -0.48
CHKA-201ENST00000265689 TRGV2A0A075B6R0 118 aa12.03□□□□□ -0.48
CHKA-201ENST00000265689 SPANXA1Q9NS26 97 aa12.03□□□□□ -0.48
CHKA-201ENST00000265689 IGHV3-64A0A075B6Q5 118 aa12.03□□□□□ -0.48
CHKA-201ENST00000265689 Q6ZUT4 128 aa12.03□□□□□ -0.48
CHKA-201ENST00000265689 RPL36AP83881 106 aaKnown RBP12.02□□□□□ -0.48
CHKA-201ENST00000265689 RPL36ALQ969Q0 106 aaKnown RBP12.02□□□□□ -0.48
CHKA-201ENST00000265689 OVOL2Q9BRP0 275 aa12.02□□□□□ -0.48
CHKA-201ENST00000265689 TRBV10-1A0A0K0K1A3 114 aa12.02□□□□□ -0.49
CHKA-201ENST00000265689 GAGE12JA6NER3 117 aa12.02□□□□□ -0.49
CHKA-201ENST00000265689 J3QQQ9 107 aa12.02□□□□□ -0.49
CHKA-201ENST00000265689 GAGE4Q13068 117 aa12.02□□□□□ -0.49
CHKA-201ENST00000265689 GAGE5Q13069 117 aa12.02□□□□□ -0.49
CHKA-201ENST00000265689 GAGE13Q4V321 117 aa12.02□□□□□ -0.49
CHKA-201ENST00000265689 CITED1Q99966 193 aa12.01□□□□□ -0.49
CHKA-201ENST00000265689 G3V4G9 280 aa12.01□□□□□ -0.49
CHKA-201ENST00000265689 CRYBA4P53673 196 aa12.01□□□□□ -0.49
CHKA-201ENST00000265689 OR5A1Q8NGJ0 315 aa12.01□□□□□ -0.49
CHKA-201ENST00000265689 MRPS36P82909 103 aaKnown RBP12□□□□□ -0.49
CHKA-201ENST00000265689 C9orf66Q5T8R8 295 aa12□□□□□ -0.49
CHKA-201ENST00000265689 NBEAL1Q6ZS30 2694 aa12□□□□□ -0.49
CHKA-201ENST00000265689 LGALS3P17931 250 aaKnown RBP12□□□□□ -0.49
CHKA-201ENST00000265689 INSL3P51460 131 aa12□□□□□ -0.49
CHKA-201ENST00000265689 NTM-AS1Q6ZSK4 140 aa12□□□□□ -0.49
CHKA-201ENST00000265689 A0A0J9YY99 117 aa11.99□□□□□ -0.49
CHKA-201ENST00000265689 LOC100131303A0A0U1RQF7 123 aa11.99□□□□□ -0.49
CHKA-201ENST00000265689 LEPROTO15243 131 aa11.99□□□□□ -0.49
CHKA-201ENST00000265689 UBE2D3P61077 147 aa11.99□□□□□ -0.49
CHKA-201ENST00000265689 UBE2D2P62837 147 aa11.99□□□□□ -0.49
CHKA-201ENST00000265689 LINC00694P0DN24 101 aa11.99□□□□□ -0.49
CHKA-201ENST00000265689 SRSF9Q13242 221 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHKA-201ENST00000265689 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
CHKA-201ENST00000265689 DAZ4Q86SG3 579 aaKnown RBP11.98□□□□□ -0.49
CHKA-201ENST00000265689 DAZ3Q9NR90 486 aaKnown RBP11.98□□□□□ -0.49
CHKA-201ENST00000265689 TRGV4A0A0C4DH28 118 aa11.97□□□□□ -0.49
CHKA-201ENST00000265689 RPL24P83731 157 aaKnown RBP11.97□□□□□ -0.49
CHKA-201ENST00000265689 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.49
CHKA-201ENST00000265689 TRAV8-3A0A0A6YYJ7 113 aa11.96□□□□□ -0.5
CHKA-201ENST00000265689 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.5
CHKA-201ENST00000265689 TIMM21Q9BVV7 248 aa11.95□□□□□ -0.5
CHKA-201ENST00000265689 TEX48A0A1B0GUV7 120 aa11.95□□□□□ -0.5
CHKA-201ENST00000265689 IGLL5B9A064 214 aa11.95□□□□□ -0.5
CHKA-201ENST00000265689 IGHV3-30-3P0DP02 117 aa11.95□□□□□ -0.5
CHKA-201ENST00000265689 UBE2D1P51668 147 aa11.95□□□□□ -0.5
CHKA-201ENST00000265689 FHL2Q14192 279 aa11.95□□□□□ -0.5
CHKA-201ENST00000265689 TRBV6-4A0A1B0GX49 114 aa11.94□□□□□ -0.5
CHKA-201ENST00000265689 DEFB130BP0DP73 79 aa11.94□□□□□ -0.5
CHKA-201ENST00000265689 DEFB130AP0DP74 79 aa11.94□□□□□ -0.5
CHKA-201ENST00000265689 X6R8D5 127 aa11.94□□□□□ -0.5
CHKA-201ENST00000265689 SBSPONQ8IVN8 264 aa11.93□□□□□ -0.5
CHKA-201ENST00000265689 A0A1B0GWB2 263 aa11.93□□□□□ -0.5
CHKA-201ENST00000265689 CIDEAO60543 219 aa11.93□□□□□ -0.5
CHKA-201ENST00000265689 SPINK8P0C7L1 97 aa11.93□□□□□ -0.5
CHKA-201ENST00000265689 MTURNQ8N3F0 131 aa11.93□□□□□ -0.5
CHKA-201ENST00000265689 GEMIN7Q9H840 131 aaKnown RBP11.92□□□□□ -0.5
CHKA-201ENST00000265689 A8MZ25 164 aa11.92□□□□□ -0.5
CHKA-201ENST00000265689 H3BMG7 143 aa11.92□□□□□ -0.5
CHKA-201ENST00000265689 WFDC2Q14508 124 aa11.92□□□□□ -0.5
CHKA-201ENST00000265689 C10orf126Q8N4M7 172 aa11.92□□□□□ -0.5
CHKA-201ENST00000265689 SPANXB1Q9NS25 103 aaPredicted RBP11.92□□□□□ -0.5
CHKA-201ENST00000265689 OXLD1Q5BKU9 147 aa11.91□□□□□ -0.5
CHKA-201ENST00000265689 IGHV1-58A0A0C4DH39 117 aa11.91□□□□□ -0.5
CHKA-201ENST00000265689 IGHV3-30P01768 117 aa11.91□□□□□ -0.5
CHKA-201ENST00000265689 IGHV3-30-5P0DP03 117 aa11.91□□□□□ -0.5
CHKA-201ENST00000265689 COX6A2Q02221 97 aa11.91□□□□□ -0.5
CHKA-201ENST00000265689 CDKN2A-AS1Q9UH64 79 aa11.91□□□□□ -0.5
CHKA-201ENST00000265689 KIR2DL5BQ8NHK3 375 aa11.9□□□□□ -0.5
CHKA-201ENST00000265689 GTSF1LQ9H1H1 148 aa11.9□□□□□ -0.5
CHKA-201ENST00000265689 MGAM2Q2M2H8 2515 aa11.9□□□□□ -0.5
CHKA-201ENST00000265689 VSIG2Q96IQ7 327 aa11.9□□□□□ -0.5
CHKA-201ENST00000265689 TMEM243Q9BU79 118 aa11.9□□□□□ -0.5
CHKA-201ENST00000265689 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
CHKA-201ENST00000265689 TMEM238LA0A1B0GVL6 79 aa11.89□□□□□ -0.51
CHKA-201ENST00000265689 A6NJY4 79 aa11.89□□□□□ -0.51
CHKA-201ENST00000265689 DEFB135Q30KP9 77 aa11.89□□□□□ -0.51
CHKA-201ENST00000265689 LINC00612Q8N6U2 182 aa11.89□□□□□ -0.51
CHKA-201ENST00000265689 C3orf56Q8N813 242 aa11.89□□□□□ -0.51
CHKA-201ENST00000265689 A0A0J9YXY3 114 aa11.88□□□□□ -0.51
CHKA-201ENST00000265689 TIRAPP58753 221 aa11.88□□□□□ -0.51
CHKA-201ENST00000265689 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
CHKA-201ENST00000265689 CDC42SE2Q9NRR3 84 aa11.88□□□□□ -0.51
CHKA-201ENST00000265689 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
CHKA-201ENST00000265689 UBE2L6O14933 153 aa11.88□□□□□ -0.51
CHKA-201ENST00000265689 SH2D6Q7Z4S9 175 aa11.88□□□□□ -0.51
CHKA-201ENST00000265689 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
CHKA-201ENST00000265689 APOMO95445 188 aa11.87□□□□□ -0.51
CHKA-201ENST00000265689 TENM3Q9P273 2699 aa11.87□□□□□ -0.51
CHKA-201ENST00000265689 IGLV5-45A0A087WSX0 123 aa11.87□□□□□ -0.51
CHKA-201ENST00000265689 DEFB4AO15263 64 aa11.87□□□□□ -0.51
CHKA-201ENST00000265689 NDUFA12Q9UI09 145 aa11.87□□□□□ -0.51
CHKA-201ENST00000265689 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
CHKA-201ENST00000265689 PGPEP1Q9NXJ5 209 aa11.86□□□□□ -0.51
CHKA-201ENST00000265689 TMEM238C9JI98 176 aa11.85□□□□□ -0.51
CHKA-201ENST00000265689 GAGE6Q13070 117 aa11.85□□□□□ -0.51
CHKA-201ENST00000265689 ETDBQ3ZM63 59 aa11.85□□□□□ -0.51
CHKA-201ENST00000265689 FAM222AQ5U5X8 452 aa11.85□□□□□ -0.51
CHKA-201ENST00000265689 HERVK_113P63121 156 aa11.85□□□□□ -0.51
CHKA-201ENST00000265689 SFTA2Q6UW10 78 aa11.85□□□□□ -0.51
CHKA-201ENST00000265689 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms