RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 LYRM7Q5U5X0 104 aa7.49□□□□□ -1.21
LSG1-201ENST00000265245 AMELXQ99217 191 aa7.49□□□□□ -1.21
LSG1-201ENST00000265245 CCL24O00175 119 aa7.49□□□□□ -1.21
LSG1-201ENST00000265245 IGHV3-53P01767 116 aa7.49□□□□□ -1.21
LSG1-201ENST00000265245 IGHV3-30P01768 117 aa7.49□□□□□ -1.21
LSG1-201ENST00000265245 IGHV3-30-5P0DP03 117 aa7.49□□□□□ -1.21
LSG1-201ENST00000265245 C10orf126Q8N4M7 172 aa7.49□□□□□ -1.21
LSG1-201ENST00000265245 PDZD2O15018 2839 aa7.49□□□□□ -1.21
LSG1-201ENST00000265245 DNAJC30Q96LL9 226 aa7.49□□□□□ -1.21
LSG1-201ENST00000265245 SPANXA1Q9NS26 97 aa7.49□□□□□ -1.21
LSG1-201ENST00000265245 APCP25054 2843 aa7.48□□□□□ -1.21
LSG1-201ENST00000265245 BEAN1Q3B7T3 259 aa7.48□□□□□ -1.21
LSG1-201ENST00000265245 Q6ZSN1 163 aa7.48□□□□□ -1.21
LSG1-201ENST00000265245 NDUFA11Q86Y39 141 aa7.48□□□□□ -1.21
LSG1-201ENST00000265245 ITPR3Q14573 2671 aa7.48□□□□□ -1.21
LSG1-201ENST00000265245 IGHV3OR16-12A0A075B7B8 117 aa7.48□□□□□ -1.21
LSG1-201ENST00000265245 C4orf26Q17RF5 130 aa7.48□□□□□ -1.21
LSG1-201ENST00000265245 CITED2Q99967 270 aaPredicted RBP7.48□□□□□ -1.21
LSG1-201ENST00000265245 MRPS36P82909 103 aaKnown RBP7.48□□□□□ -1.21
LSG1-201ENST00000265245 CEMP1Q6PRD7 247 aaPredicted RBP7.48□□□□□ -1.21
LSG1-201ENST00000265245 Q9UF83 564 aa7.48□□□□□ -1.21
LSG1-201ENST00000265245 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
LSG1-201ENST00000265245 TIMM21Q9BVV7 248 aa7.47□□□□□ -1.21
LSG1-201ENST00000265245 HELZ2Q9BYK8 2649 aaKnown RBP7.47□□□□□ -1.21
LSG1-201ENST00000265245 CHCHD7Q9BUK0 85 aa7.46□□□□□ -1.21
LSG1-201ENST00000265245 ESM1Q9NQ30 184 aa7.46□□□□□ -1.21
LSG1-201ENST00000265245 RNASE13Q5GAN3 156 aaKnown RBP7.46□□□□□ -1.22
LSG1-201ENST00000265245 UBE2D4Q9Y2X8 147 aa7.46□□□□□ -1.22
LSG1-201ENST00000265245 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.46□□□□□ -1.22
LSG1-201ENST00000265245 IGHV3-38A0A0C4DH36 116 aa7.46□□□□□ -1.22
LSG1-201ENST00000265245 IGKV2-29A2NJV5 120 aaPredicted RBP7.46□□□□□ -1.22
LSG1-201ENST00000265245 CFC1BP0CG36 223 aa7.46□□□□□ -1.22
LSG1-201ENST00000265245 CFC1P0CG37 223 aa7.46□□□□□ -1.22
LSG1-201ENST00000265245 IGHV3-30-3P0DP02 117 aa7.46□□□□□ -1.22
LSG1-201ENST00000265245 WNK1Q9H4A3 2382 aa7.46□□□□□ -1.22
LSG1-201ENST00000265245 TRGV1A0A0A0MS02 117 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 FAM236AA0A1B0GUQ0 79 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 FAM236BA0A1B0GV22 79 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 CARD19Q96LW7 228 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 PRO1854Q9UHT4 67 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 SMCPP49901 116 aaPredicted RBP7.45□□□□□ -1.22
LSG1-201ENST00000265245 C9orf153Q5TBE3 101 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 FAM104AQ969W3 186 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 FLNAP21333 2647 aaKnown RBP7.45□□□□□ -1.22
LSG1-201ENST00000265245 TINCRA0A1B0GVN0 87 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 C9JAW5 83 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 UBE2D3P61077 147 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 UBE2D2P62837 147 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 DGAT2L7PQ6IED9 249 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 C1orf158Q8N1D5 194 aa7.45□□□□□ -1.22
LSG1-201ENST00000265245 PRO0461Q9UI25 63 aa7.44□□□□□ -1.22
LSG1-201ENST00000265245 IGHV1-58A0A0C4DH39 117 aa7.44□□□□□ -1.22
LSG1-201ENST00000265245 A0A0J9YXY3 114 aa7.44□□□□□ -1.22
LSG1-201ENST00000265245 C15orf53Q8NAA6 179 aa7.44□□□□□ -1.22
LSG1-201ENST00000265245 SETD2Q9BYW2 2564 aaPredicted RBP7.43□□□□□ -1.22
LSG1-201ENST00000265245 TRAV8-3A0A0A6YYJ7 113 aa7.43□□□□□ -1.22
LSG1-201ENST00000265245 CMC4P56277 68 aaPredicted RBP7.43□□□□□ -1.22
LSG1-201ENST00000265245 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
LSG1-201ENST00000265245 LINC01006Q8NI28 216 aa7.43□□□□□ -1.22
LSG1-201ENST00000265245 NDUFA12Q9UI09 145 aa7.43□□□□□ -1.22
LSG1-201ENST00000265245 ADARB2-AS1A8MUL3 147 aa7.43□□□□□ -1.22
LSG1-201ENST00000265245 HIST2H2BCQ6DN03 193 aa7.43□□□□□ -1.22
LSG1-201ENST00000265245 MUSTN1Q8IVN3 82 aa7.43□□□□□ -1.22
LSG1-201ENST00000265245 TMEM263Q8WUH6 116 aaKnown RBP7.43□□□□□ -1.22
LSG1-201ENST00000265245 RNASE1P07998 156 aaKnown RBP7.42□□□□□ -1.22
LSG1-201ENST00000265245 RPL35AP18077 110 aaKnown RBP7.42□□□□□ -1.22
LSG1-201ENST00000265245 RPL36AP83881 106 aaKnown RBP7.42□□□□□ -1.22
LSG1-201ENST00000265245 ANKRD29Q8N6D5 301 aa7.42□□□□□ -1.22
LSG1-201ENST00000265245 RPL36ALQ969Q0 106 aaKnown RBP7.42□□□□□ -1.22
LSG1-201ENST00000265245 VSIG2Q96IQ7 327 aa7.42□□□□□ -1.22
LSG1-201ENST00000265245 TRBV10-1A0A0K0K1A3 114 aa7.42□□□□□ -1.22
LSG1-201ENST00000265245 IL17DQ8TAD2 202 aa7.42□□□□□ -1.22
LSG1-201ENST00000265245 ZNF469Q96JG9 3925 aaPredicted RBP7.42□□□□□ -1.22
LSG1-201ENST00000265245 A0A0B4J2C4 111 aa7.41□□□□□ -1.22
LSG1-201ENST00000265245 NOTCH3Q9UM47 2321 aa7.41□□□□□ -1.22
LSG1-201ENST00000265245 NACAE9PAV3 2078 aa7.41□□□□□ -1.22
LSG1-201ENST00000265245 PRSS2P07478 247 aa7.41□□□□□ -1.22
LSG1-201ENST00000265245 Q6ZTI0 123 aa7.41□□□□□ -1.22
LSG1-201ENST00000265245 C16orf95Q9H693 158 aa7.41□□□□□ -1.22
LSG1-201ENST00000265245 KIR2DL5BQ8NHK3 375 aa7.41□□□□□ -1.22
LSG1-201ENST00000265245 K7EQD1 137 aa7.4□□□□□ -1.22
LSG1-201ENST00000265245 MTORP42345 2549 aa7.4□□□□□ -1.22
LSG1-201ENST00000265245 TCL1BO95988 128 aa7.4□□□□□ -1.22
LSG1-201ENST00000265245 HERVK_113P63121 156 aa7.4□□□□□ -1.22
LSG1-201ENST00000265245 NF1P21359 2839 aa7.4□□□□□ -1.23
LSG1-201ENST00000265245 IGHV3-33P01772 117 aa7.4□□□□□ -1.23
LSG1-201ENST00000265245 KRTAP1-1Q07627 177 aa7.4□□□□□ -1.23
LSG1-201ENST00000265245 DAZ2Q13117 558 aaKnown RBP7.4□□□□□ -1.23
LSG1-201ENST00000265245 Q1RN00 199 aa7.4□□□□□ -1.23
LSG1-201ENST00000265245 DAZ4Q86SG3 579 aaKnown RBP7.4□□□□□ -1.23
LSG1-201ENST00000265245 DAZ3Q9NR90 486 aaKnown RBP7.4□□□□□ -1.23
LSG1-201ENST00000265245 ACANP16112 2415 aa7.4□□□□□ -1.23
LSG1-201ENST00000265245 TIRAPP58753 221 aa7.39□□□□□ -1.23
LSG1-201ENST00000265245 CIRBPQ14011 172 aaKnown RBP7.39□□□□□ -1.23
LSG1-201ENST00000265245 PPDPFLQ8WWR9 84 aa7.39□□□□□ -1.23
LSG1-201ENST00000265245 DSCR8Q96T75 97 aa7.39□□□□□ -1.23
LSG1-201ENST00000265245 NOP10Q9NPE3 64 aaKnown RBP7.39□□□□□ -1.23
LSG1-201ENST00000265245 ATP6V0E2Q8NHE4 81 aa7.39□□□□□ -1.23
LSG1-201ENST00000265245 NTN5Q8WTR8 489 aaPredicted RBP7.39□□□□□ -1.23
LSG1-201ENST00000265245 CDKN2A-AS1Q9UH64 79 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms